RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 RNF123Q5XPI4 1314 aa27.61■■■□□ 2.01
SDHAP3-201ENST00000436493 TRMT112Q9UI30 125 aaKnown RBP27.6■■■□□ 2.01
SDHAP3-201ENST00000436493 ANKRD36CQ5JPF3 1778 aa27.6■■■□□ 2.01
SDHAP3-201ENST00000436493 C21orf2O43822 256 aa27.59■■■□□ 2.01
SDHAP3-201ENST00000436493 PRPF40BQ6NWY9 871 aaKnown RBP27.59■■■□□ 2.01
SDHAP3-201ENST00000436493 ZNF521Q96K83 1311 aa27.59■■■□□ 2.01
SDHAP3-201ENST00000436493 ATP5J2-PTCD1G3V325 749 aa27.58■■■□□ 2.01
SDHAP3-201ENST00000436493 ALDH1B1P30837 517 aa27.58■■■□□ 2.01
SDHAP3-201ENST00000436493 MIER1Q8N108 512 aa27.58■■■□□ 2.01
SDHAP3-201ENST00000436493 RPGRQ92834 1020 aaKnown RBP27.58■■■□□ 2.01
SDHAP3-201ENST00000436493 ISCA1Q9BUE6 129 aa27.58■■■□□ 2.01
SDHAP3-201ENST00000436493 RIC1Q4ADV7 1423 aa27.58■■■□□ 2
SDHAP3-201ENST00000436493 VAMP4O75379 141 aa27.57■■■□□ 2
SDHAP3-201ENST00000436493 SLC4A2P04920 1241 aa27.57■■■□□ 2
SDHAP3-201ENST00000436493 SLC10A5Q5PT55 438 aa27.57■■■□□ 2
SDHAP3-201ENST00000436493 NLRP3Q96P20 1036 aa27.57■■■□□ 2
SDHAP3-201ENST00000436493 CRY2Q49AN0 593 aa27.56■■■□□ 2
SDHAP3-201ENST00000436493 SOGA3Q5TF21 947 aa27.56■■■□□ 2
SDHAP3-201ENST00000436493 C9orf131Q5VYM1 1079 aa27.56■■■□□ 2
SDHAP3-201ENST00000436493 SH3TC1Q8TE82 1336 aa27.56■■■□□ 2
SDHAP3-201ENST00000436493 TRIM28Q13263 835 aaKnown RBP27.54■■■□□ 2
SDHAP3-201ENST00000436493 MYD88Q99836 296 aa27.54■■■□□ 2
SDHAP3-201ENST00000436493 RNF181Q9P0P0 153 aa27.54■■■□□ 2
SDHAP3-201ENST00000436493 SLX4Q8IY92 1834 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 TNRC6CQ9HCJ0 1690 aaKnown RBP27.53■■■□□ 2
SDHAP3-201ENST00000436493 ADCY9O60503 1353 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 RASSF7Q02833 373 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 KSR2Q6VAB6 950 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 ZNF428Q96B54 188 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 RBM17Q96I25 401 aaKnown RBP27.53■■■□□ 2
SDHAP3-201ENST00000436493 ARFGEF2Q9Y6D5 1785 aa27.53■■■□□ 2
SDHAP3-201ENST00000436493 E9PSI1 815 aa27.52■■■□□ 2
SDHAP3-201ENST00000436493 HCLS1P14317 486 aaPredicted RBP27.52■■■□□ 2
SDHAP3-201ENST00000436493 HOXA10P31260 410 aaPredicted RBP27.52■■■□□ 2
SDHAP3-201ENST00000436493 METTL22Q9BUU2 404 aaPredicted RBP27.52■■■□□ 2
SDHAP3-201ENST00000436493 MAP3K2Q9Y2U5 619 aa27.52■■■□□ 2
SDHAP3-201ENST00000436493 CACNA1SQ13698 1873 aa27.52■■■□□ 2
SDHAP3-201ENST00000436493 PI4KAP2A4QPH2 592 aa27.51■■□□□ 1.99
SDHAP3-201ENST00000436493 LMNB1P20700 586 aa27.51■■□□□ 1.99
SDHAP3-201ENST00000436493 G2E3Q7L622 706 aa27.51■■□□□ 1.99
SDHAP3-201ENST00000436493 SYNE4Q8N205 404 aa27.51■■□□□ 1.99
SDHAP3-201ENST00000436493 PI4KAP1Q8N8J0 262 aa27.51■■□□□ 1.99
SDHAP3-201ENST00000436493 NFKBIEO00221 500 aa27.5■■□□□ 1.99
SDHAP3-201ENST00000436493 C3orf67Q6ZVT6 689 aa27.5■■□□□ 1.99
SDHAP3-201ENST00000436493 FAM89AQ96GI7 184 aa27.5■■□□□ 1.99
SDHAP3-201ENST00000436493 NEXNQ0ZGT2 675 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 FLIIQ13045 1269 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 CCDC93Q567U6 631 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 CCDC191Q8NCU4 936 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 ZNF526Q8TF50 670 aaPredicted RBP27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 C7orf43Q8WVR3 580 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 CRAMP1Q96RY5 1269 aa27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 GPBP1L1Q9HC44 474 aaPredicted RBP27.49■■□□□ 1.99
SDHAP3-201ENST00000436493 FKBP5Q13451 457 aaPredicted RBP27.47■■□□□ 1.99
SDHAP3-201ENST00000436493 RTL5Q5HYW3 569 aaPredicted RBP27.47■■□□□ 1.99
SDHAP3-201ENST00000436493 TAOK3Q9H2K8 898 aa27.47■■□□□ 1.99
SDHAP3-201ENST00000436493 CWC25Q9NXE8 425 aaPredicted RBP27.47■■□□□ 1.99
SDHAP3-201ENST00000436493 SBF1O95248 1867 aa27.47■■□□□ 1.99
SDHAP3-201ENST00000436493 CACNA1FO60840 1977 aa27.46■■□□□ 1.99
SDHAP3-201ENST00000436493 SLFN5Q08AF3 891 aa27.46■■□□□ 1.99
SDHAP3-201ENST00000436493 ZBTB38Q8NAP3 1195 aaPredicted RBP27.46■■□□□ 1.99
SDHAP3-201ENST00000436493 HSP90B1P14625 803 aaKnown RBP27.45■■□□□ 1.98
SDHAP3-201ENST00000436493 RTKN2Q8IZC4 609 aa27.45■■□□□ 1.98
SDHAP3-201ENST00000436493 LTBP3Q9NS15 1303 aa27.44■■□□□ 1.98
SDHAP3-201ENST00000436493 IRS4O14654 1257 aaPredicted RBP27.44■■□□□ 1.98
SDHAP3-201ENST00000436493 CC2D2BQ6DHV5 1058 aa27.44■■□□□ 1.98
SDHAP3-201ENST00000436493 DDX46Q7L014 1031 aaKnown RBP27.44■■□□□ 1.98
SDHAP3-201ENST00000436493 TMX4Q9H1E5 349 aaPredicted RBP27.44■■□□□ 1.98
SDHAP3-201ENST00000436493 FER1L6Q2WGJ9 1857 aa27.43■■□□□ 1.98
SDHAP3-201ENST00000436493 PPEF1O14829 653 aaPredicted RBP27.42■■□□□ 1.98
SDHAP3-201ENST00000436493 PCCAP05165 728 aaPredicted RBP27.42■■□□□ 1.98
SDHAP3-201ENST00000436493 PRELPP51888 382 aa27.42■■□□□ 1.98
SDHAP3-201ENST00000436493 OLFM4Q6UX06 510 aa27.42■■□□□ 1.98
SDHAP3-201ENST00000436493 CDCA7LQ96GN5 454 aa27.42■■□□□ 1.98
SDHAP3-201ENST00000436493 ABCC4O15439 1325 aa27.41■■□□□ 1.98
SDHAP3-201ENST00000436493 ZC3H4Q9UPT8 1303 aaKnown RBP27.41■■□□□ 1.98
SDHAP3-201ENST00000436493 BBOX1O75936 387 aa27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 IGKV5-2P06315 115 aa27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 FKBP4Q02790 459 aaKnown RBP eCLIP27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 GRIPAP1Q4V328 841 aa27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 DNAAF4Q8WXU2 420 aa27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 CCDC88AQ3V6T2 1871 aa27.4■■□□□ 1.98
SDHAP3-201ENST00000436493 SF3B3Q15393 1217 aaKnown RBP27.39■■□□□ 1.98
SDHAP3-201ENST00000436493 LAMB2P55268 1798 aa27.38■■□□□ 1.97
SDHAP3-201ENST00000436493 CWF19L2Q2TBE0 894 aaKnown RBP27.38■■□□□ 1.97
SDHAP3-201ENST00000436493 JARID2Q92833 1246 aaPredicted RBP27.38■■□□□ 1.97
SDHAP3-201ENST00000436493 KDM2BQ8NHM5 1336 aa27.38■■□□□ 1.97
SDHAP3-201ENST00000436493 NEURL1BA8MQ27 555 aa27.37■■□□□ 1.97
SDHAP3-201ENST00000436493 GRAPQ13588 217 aa27.37■■□□□ 1.97
SDHAP3-201ENST00000436493 GRAPLQ8TC17 118 aaPredicted RBP27.37■■□□□ 1.97
SDHAP3-201ENST00000436493 DDX60Q8IY21 1712 aaKnown RBP27.36■■□□□ 1.97
SDHAP3-201ENST00000436493 ATP6V0A2Q9Y487 856 aa27.36■■□□□ 1.97
SDHAP3-201ENST00000436493 PDE8AO60658 829 aa27.35■■□□□ 1.97
SDHAP3-201ENST00000436493 TRMT2AQ8IZ69 625 aaKnown RBP27.35■■□□□ 1.97
SDHAP3-201ENST00000436493 LINS1Q8NG48 757 aa27.35■■□□□ 1.97
SDHAP3-201ENST00000436493 ZNF277Q9NRM2 450 aaPredicted RBP27.35■■□□□ 1.97
SDHAP3-201ENST00000436493 SP8Q8IXZ3 490 aa27.34■■□□□ 1.97
SDHAP3-201ENST00000436493 PSMD1Q99460 953 aa27.34■■□□□ 1.97
SDHAP3-201ENST00000436493 CDHR2Q9BYE9 1310 aa27.34■■□□□ 1.97
SDHAP3-201ENST00000436493 F6X3S4 739 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms