RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
CALD1-208ENST00000435928 ZNF34Q8IZ26 560 aa20.65■□□□□ 0.9
CALD1-208ENST00000435928 LAMB2P55268 1798 aa20.64■□□□□ 0.9
CALD1-208ENST00000435928 FZD9O00144 591 aa20.64■□□□□ 0.89
CALD1-208ENST00000435928 NTSR2O95665 410 aa20.64■□□□□ 0.89
CALD1-208ENST00000435928 HOXA10P31260 410 aaPredicted RBP20.64■□□□□ 0.89
CALD1-208ENST00000435928 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
CALD1-208ENST00000435928 RALBP1Q15311 655 aa20.64■□□□□ 0.89
CALD1-208ENST00000435928 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
CALD1-208ENST00000435928 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
CALD1-208ENST00000435928 PASKQ96RG2 1323 aa20.63■□□□□ 0.89
CALD1-208ENST00000435928 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
CALD1-208ENST00000435928 EPHX2P34913 555 aa20.63■□□□□ 0.89
CALD1-208ENST00000435928 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
CALD1-208ENST00000435928 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
CALD1-208ENST00000435928 MKRN1Q9UHC7 482 aaKnown RBP20.63■□□□□ 0.89
CALD1-208ENST00000435928 COL4A5P29400 1685 aa20.63■□□□□ 0.89
CALD1-208ENST00000435928 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
CALD1-208ENST00000435928 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
CALD1-208ENST00000435928 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
CALD1-208ENST00000435928 GPC2Q8N158 579 aa20.62■□□□□ 0.89
CALD1-208ENST00000435928 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
CALD1-208ENST00000435928 TNS4Q8IZW8 715 aa20.61■□□□□ 0.89
CALD1-208ENST00000435928 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
CALD1-208ENST00000435928 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
CALD1-208ENST00000435928 CNTNAP1P78357 1384 aa20.6■□□□□ 0.89
CALD1-208ENST00000435928 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
CALD1-208ENST00000435928 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
CALD1-208ENST00000435928 PDIA6Q15084 440 aa20.6■□□□□ 0.89
CALD1-208ENST00000435928 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
CALD1-208ENST00000435928 LRP10Q7Z4F1 713 aa20.6■□□□□ 0.89
CALD1-208ENST00000435928 PNMA8AQ86V59 439 aaPredicted RBP20.6■□□□□ 0.89
CALD1-208ENST00000435928 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
CALD1-208ENST00000435928 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
CALD1-208ENST00000435928 ANXA1P04083 346 aa20.59■□□□□ 0.89
CALD1-208ENST00000435928 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
CALD1-208ENST00000435928 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
CALD1-208ENST00000435928 UTP14AQ9BVJ6 771 aaKnown RBP20.59■□□□□ 0.89
CALD1-208ENST00000435928 TMEM88BA6NKF7 163 aa20.58■□□□□ 0.89
CALD1-208ENST00000435928 ITGBL1O95965 494 aaPredicted RBP20.58■□□□□ 0.89
CALD1-208ENST00000435928 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.89
CALD1-208ENST00000435928 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.89
CALD1-208ENST00000435928 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
CALD1-208ENST00000435928 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
CALD1-208ENST00000435928 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
CALD1-208ENST00000435928 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
CALD1-208ENST00000435928 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
CALD1-208ENST00000435928 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
CALD1-208ENST00000435928 HSP90AB3PQ58FF7 597 aa20.56■□□□□ 0.88
CALD1-208ENST00000435928 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
CALD1-208ENST00000435928 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
CALD1-208ENST00000435928 ABCC4O15439 1325 aa20.55■□□□□ 0.88
CALD1-208ENST00000435928 AIMP1Q12904 312 aaKnown RBP20.55■□□□□ 0.88
CALD1-208ENST00000435928 COPS6Q7L5N1 327 aa20.55■□□□□ 0.88
CALD1-208ENST00000435928 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
CALD1-208ENST00000435928 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 CAPN15O75808 1086 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 CNTROBQ8N137 903 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
CALD1-208ENST00000435928 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
CALD1-208ENST00000435928 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
CALD1-208ENST00000435928 TAF1P21675 1872 aa20.53■□□□□ 0.88
CALD1-208ENST00000435928 TRPM7Q96QT4 1865 aa20.53■□□□□ 0.88
CALD1-208ENST00000435928 SCNN1DP51172 638 aa20.52■□□□□ 0.88
CALD1-208ENST00000435928 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
CALD1-208ENST00000435928 AOC3Q16853 763 aa20.52■□□□□ 0.88
CALD1-208ENST00000435928 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
CALD1-208ENST00000435928 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
CALD1-208ENST00000435928 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
CALD1-208ENST00000435928 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
CALD1-208ENST00000435928 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
CALD1-208ENST00000435928 CHL1O00533 1208 aa20.51■□□□□ 0.87
CALD1-208ENST00000435928 VEGFBP49765 207 aa20.51■□□□□ 0.87
CALD1-208ENST00000435928 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
CALD1-208ENST00000435928 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
CALD1-208ENST00000435928 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
CALD1-208ENST00000435928 EPS15P42566 896 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 SUPT20HQ8NEM7 779 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 VPS33BQ9H267 617 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
CALD1-208ENST00000435928 FOXN1O15353 648 aa20.49■□□□□ 0.87
CALD1-208ENST00000435928 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CALD1-208ENST00000435928 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
CALD1-208ENST00000435928 AIDAQ96BJ3 306 aa20.49■□□□□ 0.87
CALD1-208ENST00000435928 TRIM35Q9UPQ4 493 aa20.49■□□□□ 0.87
CALD1-208ENST00000435928 RASSF10A6NK89 507 aa20.48■□□□□ 0.87
CALD1-208ENST00000435928 BBOX1O75936 387 aa20.48■□□□□ 0.87
CALD1-208ENST00000435928 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
CALD1-208ENST00000435928 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
CALD1-208ENST00000435928 RTFDC1Q9BY42 306 aaPredicted RBP20.48■□□□□ 0.87
CALD1-208ENST00000435928 ABT1Q9ULW3 272 aaKnown RBP20.48■□□□□ 0.87
CALD1-208ENST00000435928 HOXB7P09629 217 aa20.47■□□□□ 0.87
CALD1-208ENST00000435928 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
CALD1-208ENST00000435928 THSD7BQ9C0I4 1608 aa20.46■□□□□ 0.87
CALD1-208ENST00000435928 GRAPQ13588 217 aa20.46■□□□□ 0.87
CALD1-208ENST00000435928 DEFB115Q30KQ5 88 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms