RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 UTYO14607 1347 aa12.51□□□□□ -0.41
CLSTN1-203ENST00000435891 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
CLSTN1-203ENST00000435891 TRPM3Q9HCF6 1732 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 NPHP3Q7Z494 1330 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 A0A0D9SFI3 127 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 NEURL1BA8MQ27 555 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 STX6O43752 255 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
CLSTN1-203ENST00000435891 CHGBP05060 677 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 MYD88Q99836 296 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 RBM8AQ9Y5S9 174 aaKnown RBP12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 CAMTA1Q9Y6Y1 1673 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 C5P01031 1676 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 PHKG2P15735 406 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 ME3Q16798 604 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 RUFY2Q8WXA3 655 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 MEGF6O75095 1541 aa12.49□□□□□ -0.41
CLSTN1-203ENST00000435891 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 GCKRQ14397 625 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 GJB2P29033 226 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 LRP10Q7Z4F1 713 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 FIBPO43427 364 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 KCNB2Q92953 911 aa12.48□□□□□ -0.41
CLSTN1-203ENST00000435891 ADAMTS7Q9UKP4 1686 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 F13A1P00488 732 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 VPS53Q5VIR6 699 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 CYP27B1O15528 508 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
CLSTN1-203ENST00000435891 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 CDK11BP21127 795 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 SLC27A2O14975 620 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 KCNJ4P48050 445 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 TMEM87AQ8NBN3 555 aa12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
CLSTN1-203ENST00000435891 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 MPNDQ8N594 471 aa12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 MAP7D2Q96T17 732 aa12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
CLSTN1-203ENST00000435891 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 TM6SF1Q9BZW5 370 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 UBE3BQ7Z3V4 1068 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 COL15A1P39059 1388 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 UQCRHP07919 91 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
CLSTN1-203ENST00000435891 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 PTPN12Q05209 780 aaKnown RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 DNTTIP2Q5QJE6 756 aaKnown RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 FAM173BQ6P4H8 233 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 TFCP2Q12800 502 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 ADAMTSL3P82987 1691 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
CLSTN1-203ENST00000435891 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 SEC62Q99442 399 aaKnown RBP12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms