RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 ZNF541Q9H0D2 1346 aa17.16■□□□□ 0.34
CDCA4P4-201ENST00000435216 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
CDCA4P4-201ENST00000435216 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
CDCA4P4-201ENST00000435216 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
CDCA4P4-201ENST00000435216 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
CDCA4P4-201ENST00000435216 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
CDCA4P4-201ENST00000435216 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
CDCA4P4-201ENST00000435216 COPS6Q7L5N1 327 aa17.14■□□□□ 0.33
CDCA4P4-201ENST00000435216 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
CDCA4P4-201ENST00000435216 ANKRD36CQ5JPF3 1778 aa17.14■□□□□ 0.33
CDCA4P4-201ENST00000435216 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 CHL1O00533 1208 aa17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 IARSP41252 1262 aaKnown RBP17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
CDCA4P4-201ENST00000435216 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
CDCA4P4-201ENST00000435216 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
CDCA4P4-201ENST00000435216 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
CDCA4P4-201ENST00000435216 COL4A5P29400 1685 aa17.12■□□□□ 0.33
CDCA4P4-201ENST00000435216 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
CDCA4P4-201ENST00000435216 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
CDCA4P4-201ENST00000435216 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
CDCA4P4-201ENST00000435216 PCNTO95613 3336 aa17.11■□□□□ 0.33
CDCA4P4-201ENST00000435216 SCN4AP35499 1836 aa17.11■□□□□ 0.33
CDCA4P4-201ENST00000435216 LAMB2P55268 1798 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 PPEF1O14829 653 aaPredicted RBP17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 NLRP10Q86W26 655 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 L3MBTL3Q96JM7 780 aaPredicted RBP17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 PSMD1Q99460 953 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
CDCA4P4-201ENST00000435216 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
CDCA4P4-201ENST00000435216 FZD9O00144 591 aa17.09■□□□□ 0.33
CDCA4P4-201ENST00000435216 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
CDCA4P4-201ENST00000435216 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
CDCA4P4-201ENST00000435216 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
CDCA4P4-201ENST00000435216 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
CDCA4P4-201ENST00000435216 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
CDCA4P4-201ENST00000435216 ABCC4O15439 1325 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
CDCA4P4-201ENST00000435216 TAF1P21675 1872 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 APAF1O14727 1248 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 EPHX2P34913 555 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
CDCA4P4-201ENST00000435216 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
CDCA4P4-201ENST00000435216 GPC2Q8N158 579 aa17.05■□□□□ 0.32
CDCA4P4-201ENST00000435216 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 ELL2O00472 640 aaPredicted RBP17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 EIF6P56537 245 aaKnown RBP17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 AOC3Q16853 763 aa17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 ADAMTSL1Q8N6G6 1762 aa17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 LTBP1Q14766 1721 aa17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
CDCA4P4-201ENST00000435216 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 HOXB7P09629 217 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 CREBZFQ9NS37 354 aa17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 DBF4Q9UBU7 674 aaPredicted RBP17.03■□□□□ 0.32
CDCA4P4-201ENST00000435216 PASKQ96RG2 1323 aa17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 CCDC184Q52MB2 194 aa17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 COL13A1Q5TAT6 717 aaPredicted RBP17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 MAP1SQ66K74 1059 aaPredicted RBP17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 DDX46Q7L014 1031 aaKnown RBP17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 FAM89AQ96GI7 184 aa17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.32
CDCA4P4-201ENST00000435216 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
CDCA4P4-201ENST00000435216 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
CDCA4P4-201ENST00000435216 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
CDCA4P4-201ENST00000435216 BBOX1O75936 387 aa17■□□□□ 0.31
CDCA4P4-201ENST00000435216 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
CDCA4P4-201ENST00000435216 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
CDCA4P4-201ENST00000435216 EPS15P42566 896 aa17■□□□□ 0.31
CDCA4P4-201ENST00000435216 SCNN1DP51172 638 aa17■□□□□ 0.31
CDCA4P4-201ENST00000435216 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
CDCA4P4-201ENST00000435216 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
CDCA4P4-201ENST00000435216 SP8Q8IXZ3 490 aa17■□□□□ 0.31
CDCA4P4-201ENST00000435216 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
CDCA4P4-201ENST00000435216 IFT57Q9NWB7 429 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms