RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 COPS6Q7L5N1 327 aa26.29■■□□□ 1.8
HLA-B-250ENST00000434333 LAS1LQ9Y4W2 734 aaKnown RBP26.29■■□□□ 1.8
HLA-B-250ENST00000434333 RTKN2Q8IZC4 609 aa26.28■■□□□ 1.8
HLA-B-250ENST00000434333 XAGE3Q8WTP9 111 aa26.28■■□□□ 1.8
HLA-B-250ENST00000434333 DDX21Q9NR30 783 aaKnown RBP eCLIP26.28■■□□□ 1.8
HLA-B-250ENST00000434333 ZNF277Q9NRM2 450 aaPredicted RBP26.28■■□□□ 1.8
HLA-B-250ENST00000434333 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
HLA-B-250ENST00000434333 SLC51AQ86UW1 340 aa26.26■■□□□ 1.79
HLA-B-250ENST00000434333 CFAP44Q96MT7 982 aa26.26■■□□□ 1.79
HLA-B-250ENST00000434333 AIMP1Q12904 312 aaKnown RBP26.25■■□□□ 1.79
HLA-B-250ENST00000434333 RPGRQ92834 1020 aaKnown RBP26.25■■□□□ 1.79
HLA-B-250ENST00000434333 CHPF2Q9P2E5 772 aa26.25■■□□□ 1.79
HLA-B-250ENST00000434333 APAF1O14727 1248 aa26.24■■□□□ 1.79
HLA-B-250ENST00000434333 HOXB7P09629 217 aa26.24■■□□□ 1.79
HLA-B-250ENST00000434333 SLC10A5Q5PT55 438 aa26.24■■□□□ 1.79
HLA-B-250ENST00000434333 SYNE4Q8N205 404 aa26.24■■□□□ 1.79
HLA-B-250ENST00000434333 CRAMP1Q96RY5 1269 aa26.24■■□□□ 1.79
HLA-B-250ENST00000434333 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
HLA-B-250ENST00000434333 ZNF541Q9H0D2 1346 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 ZNF853P0CG23 659 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 IARSP41252 1262 aaKnown RBP26.23■■□□□ 1.79
HLA-B-250ENST00000434333 HDGFL1Q5TGJ6 251 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 NLRP10Q86W26 655 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 PSMD1Q99460 953 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 MBIPQ9NS73 344 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 LAMB2P55268 1798 aa26.23■■□□□ 1.79
HLA-B-250ENST00000434333 COL4A5P29400 1685 aa26.22■■□□□ 1.79
HLA-B-250ENST00000434333 RNF123Q5XPI4 1314 aa26.22■■□□□ 1.79
HLA-B-250ENST00000434333 TCIRG1Q13488 830 aa26.22■■□□□ 1.79
HLA-B-250ENST00000434333 HSP90AB3PQ58FF7 597 aa26.22■■□□□ 1.79
HLA-B-250ENST00000434333 CC2D2BQ6DHV5 1058 aa26.22■■□□□ 1.79
HLA-B-250ENST00000434333 L3MBTL3Q96JM7 780 aaPredicted RBP26.22■■□□□ 1.79
HLA-B-250ENST00000434333 RBM17Q96I25 401 aaKnown RBP26.21■■□□□ 1.79
HLA-B-250ENST00000434333 NLRP3Q96P20 1036 aa26.21■■□□□ 1.79
HLA-B-250ENST00000434333 SCN4AP35499 1836 aa26.21■■□□□ 1.79
HLA-B-250ENST00000434333 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
HLA-B-250ENST00000434333 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
HLA-B-250ENST00000434333 KLRG1Q96E93 195 aa26.2■■□□□ 1.78
HLA-B-250ENST00000434333 FZD9O00144 591 aa26.19■■□□□ 1.78
HLA-B-250ENST00000434333 PPEF1O14829 653 aaPredicted RBP26.19■■□□□ 1.78
HLA-B-250ENST00000434333 CCDC184Q52MB2 194 aa26.19■■□□□ 1.78
HLA-B-250ENST00000434333 DUSP27Q5VZP5 1158 aa26.19■■□□□ 1.78
HLA-B-250ENST00000434333 DBF4Q9UBU7 674 aaPredicted RBP26.18■■□□□ 1.78
HLA-B-250ENST00000434333 PLBD2Q8NHP8 589 aa26.17■■□□□ 1.78
HLA-B-250ENST00000434333 IFT57Q9NWB7 429 aa26.17■■□□□ 1.78
HLA-B-250ENST00000434333 ABCC4O15439 1325 aa26.16■■□□□ 1.78
HLA-B-250ENST00000434333 IQCA1LA6NCM1 817 aa26.16■■□□□ 1.78
HLA-B-250ENST00000434333 TAF1DQ9H5J8 278 aaPredicted RBP26.16■■□□□ 1.78
HLA-B-250ENST00000434333 HCLS1P14317 486 aaPredicted RBP26.15■■□□□ 1.78
HLA-B-250ENST00000434333 GRIPAP1Q4V328 841 aa26.15■■□□□ 1.78
HLA-B-250ENST00000434333 CHADLQ6NUI6 762 aa26.15■■□□□ 1.78
HLA-B-250ENST00000434333 ANKRD13DQ6ZTN6 518 aa26.15■■□□□ 1.78
HLA-B-250ENST00000434333 JMYQ8N9B5 988 aa26.15■■□□□ 1.78
HLA-B-250ENST00000434333 TRMT112Q9UI30 125 aaKnown RBP26.15■■□□□ 1.78
HLA-B-250ENST00000434333 DDX60Q8IY21 1712 aaKnown RBP26.14■■□□□ 1.78
HLA-B-250ENST00000434333 TCERG1O14776 1098 aaKnown RBP26.14■■□□□ 1.78
HLA-B-250ENST00000434333 ISCA1Q9BUE6 129 aa26.14■■□□□ 1.78
HLA-B-250ENST00000434333 ADAMTSL1Q8N6G6 1762 aa26.14■■□□□ 1.78
HLA-B-250ENST00000434333 SH3TC1Q8TE82 1336 aa26.14■■□□□ 1.77
HLA-B-250ENST00000434333 GNAI1P63096 354 aa26.13■■□□□ 1.77
HLA-B-250ENST00000434333 ZNF428Q96B54 188 aa26.13■■□□□ 1.77
HLA-B-250ENST00000434333 HYPKQ9NX55 129 aa26.13■■□□□ 1.77
HLA-B-250ENST00000434333 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
HLA-B-250ENST00000434333 JDP2Q8WYK2 163 aa26.12■■□□□ 1.77
HLA-B-250ENST00000434333 CALD1Q05682 793 aaKnown RBP26.11■■□□□ 1.77
HLA-B-250ENST00000434333 GPC2Q8N158 579 aa26.11■■□□□ 1.77
HLA-B-250ENST00000434333 TAF1P21675 1872 aa26.11■■□□□ 1.77
HLA-B-250ENST00000434333 LDHDQ86WU2 507 aa26.1■■□□□ 1.77
HLA-B-250ENST00000434333 HACL1Q9UJ83 578 aa26.1■■□□□ 1.77
HLA-B-250ENST00000434333 LTBP1Q14766 1721 aa26.1■■□□□ 1.77
HLA-B-250ENST00000434333 PCNTO95613 3336 aa26.09■■□□□ 1.77
HLA-B-250ENST00000434333 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
HLA-B-250ENST00000434333 ELL2O00472 640 aaPredicted RBP26.09■■□□□ 1.77
HLA-B-250ENST00000434333 LARGE2Q8N3Y3 721 aa26.09■■□□□ 1.77
HLA-B-250ENST00000434333 C8orf58Q8NAV2 365 aa26.09■■□□□ 1.77
HLA-B-250ENST00000434333 PHAXQ9H814 394 aaKnown RBP26.08■■□□□ 1.77
HLA-B-250ENST00000434333 BBOX1O75936 387 aa26.07■■□□□ 1.76
HLA-B-250ENST00000434333 EPHX2P34913 555 aa26.07■■□□□ 1.76
HLA-B-250ENST00000434333 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
HLA-B-250ENST00000434333 SP8Q8IXZ3 490 aa26.07■■□□□ 1.76
HLA-B-250ENST00000434333 RTFDC1Q9BY42 306 aaPredicted RBP26.07■■□□□ 1.76
HLA-B-250ENST00000434333 LRRC37AA6NMS7 1700 aa26.07■■□□□ 1.76
HLA-B-250ENST00000434333 PASKQ96RG2 1323 aa26.07■■□□□ 1.76
HLA-B-250ENST00000434333 COL4A1P02462 1669 aa26.06■■□□□ 1.76
HLA-B-250ENST00000434333 EIF6P56537 245 aaKnown RBP26.06■■□□□ 1.76
HLA-B-250ENST00000434333 TRIM28Q13263 835 aaKnown RBP26.06■■□□□ 1.76
HLA-B-250ENST00000434333 GRAPQ13588 217 aa26.06■■□□□ 1.76
HLA-B-250ENST00000434333 DDX46Q7L014 1031 aaKnown RBP26.06■■□□□ 1.76
HLA-B-250ENST00000434333 GRAPLQ8TC17 118 aaPredicted RBP26.06■■□□□ 1.76
HLA-B-250ENST00000434333 FAM89AQ96GI7 184 aa26.06■■□□□ 1.76
HLA-B-250ENST00000434333 DUOX1Q9NRD9 1551 aa26.05■■□□□ 1.76
HLA-B-250ENST00000434333 PPIP5K2O43314 1243 aa26.05■■□□□ 1.76
HLA-B-250ENST00000434333 AOC3Q16853 763 aa26.05■■□□□ 1.76
HLA-B-250ENST00000434333 SF3B3Q15393 1217 aaKnown RBP26.04■■□□□ 1.76
HLA-B-250ENST00000434333 EAPPQ56P03 285 aaPredicted RBP26.04■■□□□ 1.76
HLA-B-250ENST00000434333 VPS33BQ9H267 617 aa26.04■■□□□ 1.76
HLA-B-250ENST00000434333 GJA3Q9Y6H8 435 aa26.04■■□□□ 1.76
HLA-B-250ENST00000434333 ITGBL1O95965 494 aaPredicted RBP26.03■■□□□ 1.76
HLA-B-250ENST00000434333 SCNN1DP51172 638 aa26.03■■□□□ 1.76
HLA-B-250ENST00000434333 IFFO2Q5TF58 517 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms