RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 A0A0D9SFI3 127 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 UBE2HP62256 183 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 CCDC183Q5T5S1 534 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
CD44-209ENST00000433892 COPS6Q7L5N1 327 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 XAGE3Q8WTP9 111 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
CD44-209ENST00000433892 FSD1Q9BTV5 496 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 ATP6V1DQ9Y5K8 247 aa14.14□□□□□ -0.15
CD44-209ENST00000433892 NEURL1BA8MQ27 555 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 ZNF500O60304 480 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 NEXNQ0ZGT2 675 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 EPHA10Q5JZY3 1008 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 MYD88Q99836 296 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 SLC52A2Q9HAB3 445 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 TPCN1Q9ULQ1 816 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 HIP1O00291 1037 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 SLC27A2O14975 620 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 PIP4K2AP48426 406 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 GCKRQ14397 625 aa14.13□□□□□ -0.15
CD44-209ENST00000433892 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
CD44-209ENST00000433892 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
CD44-209ENST00000433892 TCEANC2Q96MN5 208 aa14.12□□□□□ -0.15
CD44-209ENST00000433892 PTMAP06454 111 aaKnown RBP14.12□□□□□ -0.15
CD44-209ENST00000433892 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
CD44-209ENST00000433892 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
CD44-209ENST00000433892 ZNF496Q96IT1 587 aaPredicted RBP14.12□□□□□ -0.15
CD44-209ENST00000433892 TAF6LQ9Y6J9 622 aa14.12□□□□□ -0.15
CD44-209ENST00000433892 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
CD44-209ENST00000433892 TPM2P07951 284 aa14.11□□□□□ -0.15
CD44-209ENST00000433892 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
CD44-209ENST00000433892 CAMTA1Q9Y6Y1 1673 aa14.11□□□□□ -0.15
CD44-209ENST00000433892 PHKG2P15735 406 aa14.11□□□□□ -0.15
CD44-209ENST00000433892 ZNF589Q86UQ0 364 aaPredicted RBP14.11□□□□□ -0.15
CD44-209ENST00000433892 METTL22Q9BUU2 404 aaPredicted RBP14.11□□□□□ -0.15
CD44-209ENST00000433892 USP16Q9Y5T5 823 aa14.11□□□□□ -0.15
CD44-209ENST00000433892 HCLS1P14317 486 aaPredicted RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 PSMA5P28066 241 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 MCM5P33992 734 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 ANKRD13DQ6ZTN6 518 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 MPNDQ8N594 471 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 FAM184AQ8NB25 1140 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 R3HCC1Q9Y3T6 440 aaKnown RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 ZNF142P52746 1687 aaPredicted RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 LETM1O95202 739 aaPredicted RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 LARP1BQ659C4 914 aaKnown RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 DDX17Q92841 729 aaKnown RBP14.1□□□□□ -0.15
CD44-209ENST00000433892 USP25Q9UHP3 1055 aa14.1□□□□□ -0.15
CD44-209ENST00000433892 TRPM3Q9HCF6 1732 aaPredicted RBP14.09□□□□□ -0.15
CD44-209ENST00000433892 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
CD44-209ENST00000433892 RNF20Q5VTR2 975 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 GIMAP6Q6P9H5 292 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 BLOC1S2Q6QNY1 142 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 NDUFB9Q9Y6M9 179 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 C5P01031 1676 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
CD44-209ENST00000433892 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.15
CD44-209ENST00000433892 FERMT3Q86UX7 667 aa14.08□□□□□ -0.15
CD44-209ENST00000433892 DBNLQ9UJU6 430 aaKnown RBP14.08□□□□□ -0.15
CD44-209ENST00000433892 MED23Q9ULK4 1368 aa14.08□□□□□ -0.15
CD44-209ENST00000433892 C1orf167Q5SNV9 1468 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 RPS6KB1P23443 525 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 TFCP2Q12800 502 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 UVSSAQ2YD98 709 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 UBE3BQ7Z3V4 1068 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 LRP10Q7Z4F1 713 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
CD44-209ENST00000433892 ATP5J2-PTCD1G3V325 749 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
CD44-209ENST00000433892 SNRPA1P09661 255 aaKnown RBP14.07□□□□□ -0.16
CD44-209ENST00000433892 PTPN12Q05209 780 aaKnown RBP14.07□□□□□ -0.16
CD44-209ENST00000433892 FAM173BQ6P4H8 233 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
CD44-209ENST00000433892 MEGF6O75095 1541 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 RRP9O43818 475 aaKnown RBP14.07□□□□□ -0.16
CD44-209ENST00000433892 TAF5LO75529 589 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 CHGBP05060 677 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 RFX5P48382 616 aaPredicted RBP14.07□□□□□ -0.16
CD44-209ENST00000433892 STK3Q13188 491 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
CD44-209ENST00000433892 ADCY5O95622 1261 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms