RNA–Protein interactions for RNA: ENST00000433041.1

BRD3-204, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-204ENST00000433041 KRT24Q2M2I5 525 aa20.67■□□□□ 0.9
BRD3-204ENST00000433041 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
BRD3-204ENST00000433041 LMOD3Q0VAK6 560 aa20.66■□□□□ 0.9
BRD3-204ENST00000433041 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
BRD3-204ENST00000433041 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
BRD3-204ENST00000433041 LTBP1Q14766 1721 aa20.65■□□□□ 0.9
BRD3-204ENST00000433041 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
BRD3-204ENST00000433041 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
BRD3-204ENST00000433041 NEUROD2Q15784 382 aa20.65■□□□□ 0.9
BRD3-204ENST00000433041 L3MBTL3Q96JM7 780 aaPredicted RBP20.65■□□□□ 0.9
BRD3-204ENST00000433041 PCNTO95613 3336 aa20.64■□□□□ 0.89
BRD3-204ENST00000433041 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
BRD3-204ENST00000433041 RTKN2Q8IZC4 609 aa20.64■□□□□ 0.89
BRD3-204ENST00000433041 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
BRD3-204ENST00000433041 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.89
BRD3-204ENST00000433041 SYNE4Q8N205 404 aa20.63■□□□□ 0.89
BRD3-204ENST00000433041 CHL1O00533 1208 aa20.62■□□□□ 0.89
BRD3-204ENST00000433041 CHADLQ6NUI6 762 aa20.62■□□□□ 0.89
BRD3-204ENST00000433041 RPGRQ92834 1020 aaKnown RBP20.62■□□□□ 0.89
BRD3-204ENST00000433041 RUNDC1Q96C34 613 aa20.62■□□□□ 0.89
BRD3-204ENST00000433041 PSMD1Q99460 953 aa20.62■□□□□ 0.89
BRD3-204ENST00000433041 TAF1P21675 1872 aa20.62■□□□□ 0.89
BRD3-204ENST00000433041 FZD9O00144 591 aa20.61■□□□□ 0.89
BRD3-204ENST00000433041 PARP10Q53GL7 1025 aa20.61■□□□□ 0.89
BRD3-204ENST00000433041 XAGE3Q8WTP9 111 aa20.61■□□□□ 0.89
BRD3-204ENST00000433041 TAF1DQ9H5J8 278 aaPredicted RBP20.61■□□□□ 0.89
BRD3-204ENST00000433041 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
BRD3-204ENST00000433041 PPEF1O14829 653 aaPredicted RBP20.6■□□□□ 0.89
BRD3-204ENST00000433041 WDR43Q15061 677 aaKnown RBP eCLIP20.6■□□□□ 0.89
BRD3-204ENST00000433041 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
BRD3-204ENST00000433041 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
BRD3-204ENST00000433041 LRRC37AA6NMS7 1700 aa20.59■□□□□ 0.89
BRD3-204ENST00000433041 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
BRD3-204ENST00000433041 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
BRD3-204ENST00000433041 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
BRD3-204ENST00000433041 COL4A1P02462 1669 aa20.58■□□□□ 0.89
BRD3-204ENST00000433041 AIMP1Q12904 312 aaKnown RBP20.58■□□□□ 0.89
BRD3-204ENST00000433041 NLRP10Q86W26 655 aa20.58■□□□□ 0.89
BRD3-204ENST00000433041 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.89
BRD3-204ENST00000433041 UTP14AQ9BVJ6 771 aaKnown RBP20.58■□□□□ 0.89
BRD3-204ENST00000433041 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.89
BRD3-204ENST00000433041 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
BRD3-204ENST00000433041 ABCC4O15439 1325 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 PASKQ96RG2 1323 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
BRD3-204ENST00000433041 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 CC2D2BQ6DHV5 1058 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
BRD3-204ENST00000433041 DUOX1Q9NRD9 1551 aa20.57■□□□□ 0.88
BRD3-204ENST00000433041 HACL1Q9UJ83 578 aa20.56■□□□□ 0.88
BRD3-204ENST00000433041 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
BRD3-204ENST00000433041 NLRP3Q96P20 1036 aa20.55■□□□□ 0.88
BRD3-204ENST00000433041 HCLS1P14317 486 aaPredicted RBP20.54■□□□□ 0.88
BRD3-204ENST00000433041 EPHX2P34913 555 aa20.54■□□□□ 0.88
BRD3-204ENST00000433041 EAPPQ56P03 285 aaPredicted RBP20.54■□□□□ 0.88
BRD3-204ENST00000433041 HDGFL1Q5TGJ6 251 aa20.54■□□□□ 0.88
BRD3-204ENST00000433041 GPC2Q8N158 579 aa20.54■□□□□ 0.88
BRD3-204ENST00000433041 CREBZFQ9NS37 354 aa20.54■□□□□ 0.88
BRD3-204ENST00000433041 TCIRG1Q13488 830 aa20.53■□□□□ 0.88
BRD3-204ENST00000433041 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
BRD3-204ENST00000433041 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
BRD3-204ENST00000433041 ANP32CO43423 234 aa20.52■□□□□ 0.88
BRD3-204ENST00000433041 ITGBL1O95965 494 aaPredicted RBP20.52■□□□□ 0.88
BRD3-204ENST00000433041 HOXB7P09629 217 aa20.52■□□□□ 0.88
BRD3-204ENST00000433041 COL13A1Q5TAT6 717 aaPredicted RBP20.52■□□□□ 0.88
BRD3-204ENST00000433041 LARGE2Q8N3Y3 721 aa20.52■□□□□ 0.88
BRD3-204ENST00000433041 MBIPQ9NS73 344 aa20.52■□□□□ 0.88
BRD3-204ENST00000433041 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
BRD3-204ENST00000433041 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
BRD3-204ENST00000433041 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
BRD3-204ENST00000433041 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
BRD3-204ENST00000433041 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
BRD3-204ENST00000433041 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
BRD3-204ENST00000433041 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
BRD3-204ENST00000433041 GJA3Q9Y6H8 435 aa20.51■□□□□ 0.87
BRD3-204ENST00000433041 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
BRD3-204ENST00000433041 SCNN1DP51172 638 aa20.5■□□□□ 0.87
BRD3-204ENST00000433041 AOC3Q16853 763 aa20.5■□□□□ 0.87
BRD3-204ENST00000433041 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
BRD3-204ENST00000433041 CNTNAP1P78357 1384 aa20.49■□□□□ 0.87
BRD3-204ENST00000433041 PPIP5K2O43314 1243 aa20.49■□□□□ 0.87
BRD3-204ENST00000433041 EIF6P56537 245 aaKnown RBP20.49■□□□□ 0.87
BRD3-204ENST00000433041 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
BRD3-204ENST00000433041 PLBD2Q8NHP8 589 aa20.49■□□□□ 0.87
BRD3-204ENST00000433041 ISCA1Q9BUE6 129 aa20.49■□□□□ 0.87
BRD3-204ENST00000433041 APAF1O14727 1248 aa20.48■□□□□ 0.87
BRD3-204ENST00000433041 MAP1SQ66K74 1059 aaPredicted RBP20.48■□□□□ 0.87
BRD3-204ENST00000433041 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
BRD3-204ENST00000433041 PNMA8AQ86V59 439 aaPredicted RBP20.47■□□□□ 0.87
BRD3-204ENST00000433041 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
BRD3-204ENST00000433041 RTFDC1Q9BY42 306 aaPredicted RBP20.47■□□□□ 0.87
BRD3-204ENST00000433041 CLEC11AQ9Y240 323 aa20.47■□□□□ 0.87
BRD3-204ENST00000433041 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
BRD3-204ENST00000433041 EPS15P42566 896 aa20.46■□□□□ 0.87
BRD3-204ENST00000433041 GRAPQ13588 217 aa20.46■□□□□ 0.87
BRD3-204ENST00000433041 ANKRD13DQ6ZTN6 518 aa20.46■□□□□ 0.87
BRD3-204ENST00000433041 GRAPLQ8TC17 118 aaPredicted RBP20.46■□□□□ 0.87
BRD3-204ENST00000433041 TRPM7Q96QT4 1865 aa20.45■□□□□ 0.86
BRD3-204ENST00000433041 SP8Q8IXZ3 490 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms