RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 DIAPH3Q9NSV4 1193 aa17.78■□□□□ 0.44
RFTN1-203ENST00000432519 PANK2Q9BZ23 570 aa17.77■□□□□ 0.44
RFTN1-203ENST00000432519 LAMB4A4D0S4 1761 aa17.77■□□□□ 0.44
RFTN1-203ENST00000432519 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.44
RFTN1-203ENST00000432519 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
RFTN1-203ENST00000432519 TFCP2Q12800 502 aa17.77■□□□□ 0.44
RFTN1-203ENST00000432519 RABL6Q3YEC7 729 aaPredicted RBP17.77■□□□□ 0.44
RFTN1-203ENST00000432519 MCTP1Q6DN14 999 aa17.77■□□□□ 0.44
RFTN1-203ENST00000432519 DBNLQ9UJU6 430 aaKnown RBP17.76■□□□□ 0.43
RFTN1-203ENST00000432519 NUCB2P80303 420 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 CUL4AQ13619 759 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 LMBR1LQ6UX01 489 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 GAS2L3Q86XJ1 694 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 BTG4Q9NY30 223 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
RFTN1-203ENST00000432519 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
RFTN1-203ENST00000432519 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
RFTN1-203ENST00000432519 FOXO4P98177 505 aa17.75■□□□□ 0.43
RFTN1-203ENST00000432519 NMIQ13287 307 aaPredicted RBP17.75■□□□□ 0.43
RFTN1-203ENST00000432519 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
RFTN1-203ENST00000432519 A0A0D9SFI3 127 aa17.75■□□□□ 0.43
RFTN1-203ENST00000432519 GPATCH3Q96I76 525 aa17.75■□□□□ 0.43
RFTN1-203ENST00000432519 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
RFTN1-203ENST00000432519 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
RFTN1-203ENST00000432519 GOLGA6L3A6NEY3 463 aa17.74■□□□□ 0.43
RFTN1-203ENST00000432519 TTC14Q96N46 770 aa17.74■□□□□ 0.43
RFTN1-203ENST00000432519 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
RFTN1-203ENST00000432519 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
RFTN1-203ENST00000432519 KIAA1211Q6ZU35 1233 aa17.74■□□□□ 0.43
RFTN1-203ENST00000432519 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 TAF6LQ9Y6J9 622 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 H7C1W4 665 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 PIGBQ92521 554 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
RFTN1-203ENST00000432519 PAPPAQ13219 1627 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 AK2P54819 239 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 LMBRD1Q9NUN5 540 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 TNS2Q63HR2 1409 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
RFTN1-203ENST00000432519 MCM2P49736 904 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
RFTN1-203ENST00000432519 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
RFTN1-203ENST00000432519 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
RFTN1-203ENST00000432519 NUP188Q5SRE5 1749 aa17.71■□□□□ 0.43
RFTN1-203ENST00000432519 LARGE1O95461 756 aa17.71■□□□□ 0.43
RFTN1-203ENST00000432519 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
RFTN1-203ENST00000432519 DNAJC10Q8IXB1 793 aa17.71■□□□□ 0.43
RFTN1-203ENST00000432519 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
RFTN1-203ENST00000432519 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
RFTN1-203ENST00000432519 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
RFTN1-203ENST00000432519 CCDC171Q6TFL3 1326 aa17.7■□□□□ 0.42
RFTN1-203ENST00000432519 TJP1Q07157 1748 aa17.7■□□□□ 0.42
RFTN1-203ENST00000432519 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
RFTN1-203ENST00000432519 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
RFTN1-203ENST00000432519 CWC25Q9NXE8 425 aaPredicted RBP17.7■□□□□ 0.42
RFTN1-203ENST00000432519 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
RFTN1-203ENST00000432519 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
RFTN1-203ENST00000432519 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
RFTN1-203ENST00000432519 SLFNL1Q499Z3 407 aa17.69■□□□□ 0.42
RFTN1-203ENST00000432519 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
RFTN1-203ENST00000432519 RBM8AQ9Y5S9 174 aaKnown RBP17.69■□□□□ 0.42
RFTN1-203ENST00000432519 COL15A1P39059 1388 aa17.69■□□□□ 0.42
RFTN1-203ENST00000432519 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
RFTN1-203ENST00000432519 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
RFTN1-203ENST00000432519 JAKMIP1Q96N16 626 aaKnown RBP17.69■□□□□ 0.42
RFTN1-203ENST00000432519 BRD1O95696 1058 aa17.68■□□□□ 0.42
RFTN1-203ENST00000432519 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
RFTN1-203ENST00000432519 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
RFTN1-203ENST00000432519 TIMM10P62072 90 aa17.68■□□□□ 0.42
RFTN1-203ENST00000432519 L1TD1Q5T7N2 865 aaKnown RBP17.68■□□□□ 0.42
RFTN1-203ENST00000432519 SYNE4Q8N205 404 aa17.68■□□□□ 0.42
RFTN1-203ENST00000432519 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
RFTN1-203ENST00000432519 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
RFTN1-203ENST00000432519 SEC62Q99442 399 aaKnown RBP17.68■□□□□ 0.42
RFTN1-203ENST00000432519 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
RFTN1-203ENST00000432519 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
RFTN1-203ENST00000432519 SKOR2Q2VWA4 1001 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-203ENST00000432519 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
RFTN1-203ENST00000432519 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-203ENST00000432519 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
RFTN1-203ENST00000432519 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
RFTN1-203ENST00000432519 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
RFTN1-203ENST00000432519 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
RFTN1-203ENST00000432519 ATP5JP18859 108 aa17.66■□□□□ 0.42
RFTN1-203ENST00000432519 CREB3L3Q68CJ9 461 aa17.66■□□□□ 0.42
RFTN1-203ENST00000432519 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
RFTN1-203ENST00000432519 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
RFTN1-203ENST00000432519 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
RFTN1-203ENST00000432519 MED23Q9ULK4 1368 aa17.66■□□□□ 0.42
RFTN1-203ENST00000432519 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
RFTN1-203ENST00000432519 KCNB2Q92953 911 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
RFTN1-203ENST00000432519 ST3GAL1Q11201 340 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 CAVIN1Q6NZI2 390 aaKnown RBP17.65■□□□□ 0.42
RFTN1-203ENST00000432519 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms