RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 GIMAP6Q6P9H5 292 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 SMAP1Q8IYB5 467 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-202ENST00000432306 GAS2L2Q8NHY3 880 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 DDX49Q9Y6V7 483 aaKnown RBP9.81□□□□□ -0.84
VTI1A-202ENST00000432306 DISP2A7MBM2 1401 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 TECPR2O15040 1411 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 ABCC4O15439 1325 aa9.8□□□□□ -0.84
VTI1A-202ENST00000432306 RAB11FIP3O75154 756 aa9.8□□□□□ -0.84
VTI1A-202ENST00000432306 CDC45O75419 566 aa9.8□□□□□ -0.84
VTI1A-202ENST00000432306 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-202ENST00000432306 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
VTI1A-202ENST00000432306 CNPY4Q8N129 248 aa9.8□□□□□ -0.84
VTI1A-202ENST00000432306 PPP1R1BQ9UD71 204 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-202ENST00000432306 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
VTI1A-202ENST00000432306 ARHGEF10O15013 1369 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 ZSCAN23Q3MJ62 389 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 CCDC181Q5TID7 509 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 TMTC2Q8N394 836 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-202ENST00000432306 SBNO1A3KN83 1393 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 EVC2Q86UK5 1308 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
VTI1A-202ENST00000432306 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
VTI1A-202ENST00000432306 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
VTI1A-202ENST00000432306 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
VTI1A-202ENST00000432306 ARHGEF28Q8N1W1 1705 aaKnown RBP9.78□□□□□ -0.84
VTI1A-202ENST00000432306 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
VTI1A-202ENST00000432306 ZNF662Q6ZS27 426 aa9.78□□□□□ -0.84
VTI1A-202ENST00000432306 WAPLQ7Z5K2 1190 aa9.78□□□□□ -0.84
VTI1A-202ENST00000432306 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
VTI1A-202ENST00000432306 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
VTI1A-202ENST00000432306 MORC4Q8TE76 937 aa9.78□□□□□ -0.84
VTI1A-202ENST00000432306 LRSAM1Q6UWE0 723 aa9.77□□□□□ -0.85
VTI1A-202ENST00000432306 IL17RAQ96F46 866 aa9.77□□□□□ -0.85
VTI1A-202ENST00000432306 METTL14Q9HCE5 456 aaKnown RBP9.77□□□□□ -0.85
VTI1A-202ENST00000432306 STK26Q9P289 416 aa9.77□□□□□ -0.85
VTI1A-202ENST00000432306 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-202ENST00000432306 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 FCHSD2O94868 740 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 ZNF16P17020 682 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 UTP14CQ5TAP6 766 aaKnown RBP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 SASS6Q6UVJ0 657 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 TERF2IPQ9NYB0 399 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 THSD7AQ9UPZ6 1657 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 MBD3O95983 291 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 SGSM3Q96HU1 749 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 USP26Q9BXU7 913 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 UBA5Q9GZZ9 404 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-202ENST00000432306 RREB1Q92766 1687 aa9.76□□□□□ -0.85
VTI1A-202ENST00000432306 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
VTI1A-202ENST00000432306 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
VTI1A-202ENST00000432306 ZNF853P0CG23 659 aa9.75□□□□□ -0.85
VTI1A-202ENST00000432306 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
VTI1A-202ENST00000432306 DCTPP1Q9H773 170 aa9.75□□□□□ -0.85
VTI1A-202ENST00000432306 BTG4Q9NY30 223 aa9.75□□□□□ -0.85
VTI1A-202ENST00000432306 GNEQ9Y223 722 aaKnown RBP9.75□□□□□ -0.85
VTI1A-202ENST00000432306 UQCRHLA0A096LP55 91 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 VAMP4O75379 141 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 UQCRHP07919 91 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 PRIM1P49642 420 aaKnown RBP9.74□□□□□ -0.85
VTI1A-202ENST00000432306 SH3D19Q5HYK7 790 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 ANKRD45Q5TZF3 282 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 NUP188Q5SRE5 1749 aa9.74□□□□□ -0.85
VTI1A-202ENST00000432306 TTC22Q5TAA0 569 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 NBPF14Q5TI25 921 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 GPT2Q8TD30 523 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 CAMKK2Q96RR4 588 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 TRAK1Q9UPV9 953 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 TRPM3Q9HCF6 1732 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 CPSF1Q10570 1443 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 YTHDC2Q9H6S0 1430 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 ALS2Q96Q42 1657 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 ST18O60284 1047 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 TNNT2P45379 298 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 FAM182BQ5T319 152 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 API5Q9BZZ5 524 aaKnown RBP9.73□□□□□ -0.85
VTI1A-202ENST00000432306 IFT57Q9NWB7 429 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 ZDHHC9Q9Y397 364 aa9.73□□□□□ -0.85
VTI1A-202ENST00000432306 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
VTI1A-202ENST00000432306 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms