RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 F6X3S4 739 aa18.33■□□□□ 0.52
CSTF3-202ENST00000431742 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
CSTF3-202ENST00000431742 BCAR3O75815 825 aa18.33■□□□□ 0.52
CSTF3-202ENST00000431742 IGKV5-2P06315 115 aa18.33■□□□□ 0.52
CSTF3-202ENST00000431742 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
CSTF3-202ENST00000431742 TPTE2Q6XPS3 522 aa18.32■□□□□ 0.52
CSTF3-202ENST00000431742 CCDC191Q8NCU4 936 aa18.32■□□□□ 0.52
CSTF3-202ENST00000431742 NEURL1BA8MQ27 555 aa18.31■□□□□ 0.52
CSTF3-202ENST00000431742 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
CSTF3-202ENST00000431742 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
CSTF3-202ENST00000431742 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
CSTF3-202ENST00000431742 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
CSTF3-202ENST00000431742 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 ST5P78524 1137 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 CWF19L2Q2TBE0 894 aaKnown RBP18.3■□□□□ 0.52
CSTF3-202ENST00000431742 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 LINS1Q8NG48 757 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 ARHGAP45Q92619 1136 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 SYT17Q9BSW7 474 aa18.3■□□□□ 0.52
CSTF3-202ENST00000431742 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
CSTF3-202ENST00000431742 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
CSTF3-202ENST00000431742 NUTM1Q86Y26 1132 aa18.29■□□□□ 0.52
CSTF3-202ENST00000431742 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
CSTF3-202ENST00000431742 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
CSTF3-202ENST00000431742 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
CSTF3-202ENST00000431742 TGFB2P61812 414 aa18.28■□□□□ 0.52
CSTF3-202ENST00000431742 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
CSTF3-202ENST00000431742 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
CSTF3-202ENST00000431742 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
CSTF3-202ENST00000431742 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
CSTF3-202ENST00000431742 ABCC4O15439 1325 aa18.27■□□□□ 0.52
CSTF3-202ENST00000431742 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
CSTF3-202ENST00000431742 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.52
CSTF3-202ENST00000431742 SLC10A5Q5PT55 438 aa18.27■□□□□ 0.52
CSTF3-202ENST00000431742 NPHP1O15259 732 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
CSTF3-202ENST00000431742 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
CSTF3-202ENST00000431742 TRIM27P14373 513 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 GCKRQ14397 625 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
CSTF3-202ENST00000431742 TAF1P21675 1872 aa18.26■□□□□ 0.51
CSTF3-202ENST00000431742 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
CSTF3-202ENST00000431742 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
CSTF3-202ENST00000431742 PDE6BP35913 854 aa18.25■□□□□ 0.51
CSTF3-202ENST00000431742 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
CSTF3-202ENST00000431742 FAM89AQ96GI7 184 aa18.25■□□□□ 0.51
CSTF3-202ENST00000431742 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
CSTF3-202ENST00000431742 SLX4Q8IY92 1834 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 DPEP1P16444 411 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 KCNA3P22001 575 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 CASP7P55210 303 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
CSTF3-202ENST00000431742 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
CSTF3-202ENST00000431742 H7C1W4 665 aa18.23■□□□□ 0.51
CSTF3-202ENST00000431742 CHRNA5P30532 468 aa18.23■□□□□ 0.51
CSTF3-202ENST00000431742 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
CSTF3-202ENST00000431742 SPEF2Q9C093 1822 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 SRGNP10124 158 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
CSTF3-202ENST00000431742 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
CSTF3-202ENST00000431742 UBE3BQ7Z3V4 1068 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 C2CD5Q86YS7 1000 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 UTYO14607 1347 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 COL4A1P02462 1669 aa18.22■□□□□ 0.51
CSTF3-202ENST00000431742 H0YIN7 160 aa18.21■□□□□ 0.51
CSTF3-202ENST00000431742 GRM8O00222 908 aa18.21■□□□□ 0.51
CSTF3-202ENST00000431742 IRS4O14654 1257 aaPredicted RBP18.21■□□□□ 0.51
CSTF3-202ENST00000431742 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
CSTF3-202ENST00000431742 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
CSTF3-202ENST00000431742 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
CSTF3-202ENST00000431742 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
CSTF3-202ENST00000431742 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
CSTF3-202ENST00000431742 GOLGB1Q14789 3259 aaKnown RBP18.19■□□□□ 0.5
CSTF3-202ENST00000431742 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
CSTF3-202ENST00000431742 HOXA10P31260 410 aaPredicted RBP18.19■□□□□ 0.5
CSTF3-202ENST00000431742 STYK1Q6J9G0 422 aa18.19■□□□□ 0.5
CSTF3-202ENST00000431742 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
CSTF3-202ENST00000431742 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 PDE8AO60658 829 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 NPR1P16066 1061 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
CSTF3-202ENST00000431742 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 MASTLQ96GX5 879 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
CSTF3-202ENST00000431742 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
CSTF3-202ENST00000431742 RLBP1P12271 317 aa18.17■□□□□ 0.5
CSTF3-202ENST00000431742 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
CSTF3-202ENST00000431742 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
CSTF3-202ENST00000431742 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
CSTF3-202ENST00000431742 A0A1B0GUL6 1792 aa18.17■□□□□ 0.5
CSTF3-202ENST00000431742 RTL9Q8NET4 1388 aa18.17■□□□□ 0.5
CSTF3-202ENST00000431742 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms