RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 HLFQ16534 295 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 RPGRQ92834 1020 aaKnown RBP20.06■□□□□ 0.8
RPL28-204ENST00000431533 PSMD1Q99460 953 aa20.06■□□□□ 0.8
RPL28-204ENST00000431533 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
RPL28-204ENST00000431533 EPHX2P34913 555 aa20.05■□□□□ 0.8
RPL28-204ENST00000431533 EIF6P56537 245 aaKnown RBP20.05■□□□□ 0.8
RPL28-204ENST00000431533 GPC2Q8N158 579 aa20.05■□□□□ 0.8
RPL28-204ENST00000431533 AIDAQ96BJ3 306 aa20.05■□□□□ 0.8
RPL28-204ENST00000431533 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
RPL28-204ENST00000431533 CNTNAP1P78357 1384 aa20.05■□□□□ 0.8
RPL28-204ENST00000431533 MAP3K15Q6ZN16 1313 aa20.04■□□□□ 0.8
RPL28-204ENST00000431533 FZD9O00144 591 aa20.04■□□□□ 0.8
RPL28-204ENST00000431533 APAF1O14727 1248 aa20.03■□□□□ 0.8
RPL28-204ENST00000431533 MYL6BP14649 208 aa20.03■□□□□ 0.8
RPL28-204ENST00000431533 LMOD1P29536 600 aaPredicted RBP20.03■□□□□ 0.8
RPL28-204ENST00000431533 CRY2Q49AN0 593 aa20.03■□□□□ 0.8
RPL28-204ENST00000431533 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.8
RPL28-204ENST00000431533 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
RPL28-204ENST00000431533 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.8
RPL28-204ENST00000431533 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
RPL28-204ENST00000431533 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
RPL28-204ENST00000431533 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
RPL28-204ENST00000431533 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
RPL28-204ENST00000431533 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
RPL28-204ENST00000431533 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
RPL28-204ENST00000431533 OLFM4Q6UX06 510 aa20■□□□□ 0.79
RPL28-204ENST00000431533 NUTM1Q86Y26 1132 aa20■□□□□ 0.79
RPL28-204ENST00000431533 CNTROBQ8N137 903 aa20■□□□□ 0.79
RPL28-204ENST00000431533 NECTIN2Q92692 538 aa20■□□□□ 0.79
RPL28-204ENST00000431533 BABAM1Q9NWV8 329 aa20■□□□□ 0.79
RPL28-204ENST00000431533 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
RPL28-204ENST00000431533 CTCFP49711 727 aaPredicted RBP19.99■□□□□ 0.79
RPL28-204ENST00000431533 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
RPL28-204ENST00000431533 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
RPL28-204ENST00000431533 PRDM10Q9NQV6 1147 aa19.99■□□□□ 0.79
RPL28-204ENST00000431533 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
RPL28-204ENST00000431533 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
RPL28-204ENST00000431533 DEFB115Q30KQ5 88 aa19.98■□□□□ 0.79
RPL28-204ENST00000431533 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
RPL28-204ENST00000431533 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
RPL28-204ENST00000431533 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
RPL28-204ENST00000431533 NUP98P52948 1817 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 CHL1O00533 1208 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 GPTP24298 496 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 VEGFBP49765 207 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
RPL28-204ENST00000431533 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 VPS33BQ9H267 617 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 ZBTB3Q9H5J0 574 aa19.97■□□□□ 0.79
RPL28-204ENST00000431533 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
RPL28-204ENST00000431533 ANXA1P04083 346 aa19.96■□□□□ 0.79
RPL28-204ENST00000431533 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
RPL28-204ENST00000431533 ZNF34Q8IZ26 560 aa19.96■□□□□ 0.79
RPL28-204ENST00000431533 ABCC12Q96J65 1359 aa19.95■□□□□ 0.79
RPL28-204ENST00000431533 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
RPL28-204ENST00000431533 FOXN1O15353 648 aa19.95■□□□□ 0.78
RPL28-204ENST00000431533 SUSD4Q5VX71 490 aa19.95■□□□□ 0.78
RPL28-204ENST00000431533 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
RPL28-204ENST00000431533 SUPT20HQ8NEM7 779 aa19.95■□□□□ 0.78
RPL28-204ENST00000431533 MAP2K1Q02750 393 aaPredicted RBP19.94■□□□□ 0.78
RPL28-204ENST00000431533 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
RPL28-204ENST00000431533 PROSER3Q2NL68 480 aa19.93■□□□□ 0.78
RPL28-204ENST00000431533 HSP90AB3PQ58FF7 597 aa19.93■□□□□ 0.78
RPL28-204ENST00000431533 USP50Q70EL3 339 aaPredicted RBP19.93■□□□□ 0.78
RPL28-204ENST00000431533 CFAP44Q96MT7 982 aa19.93■□□□□ 0.78
RPL28-204ENST00000431533 UTP14AQ9BVJ6 771 aaKnown RBP19.93■□□□□ 0.78
RPL28-204ENST00000431533 MBIPQ9NS73 344 aa19.93■□□□□ 0.78
RPL28-204ENST00000431533 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
RPL28-204ENST00000431533 PCNTO95613 3336 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 NTSR2O95665 410 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 ECE1P42892 770 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
RPL28-204ENST00000431533 WBP1LQ9NX94 342 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
RPL28-204ENST00000431533 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
RPL28-204ENST00000431533 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
RPL28-204ENST00000431533 AIMP1Q12904 312 aaKnown RBP19.91■□□□□ 0.78
RPL28-204ENST00000431533 PDIA6Q15084 440 aa19.91■□□□□ 0.78
RPL28-204ENST00000431533 SLC10A5Q5PT55 438 aa19.91■□□□□ 0.78
RPL28-204ENST00000431533 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
RPL28-204ENST00000431533 WDR33Q9C0J8 1336 aaKnown RBP19.91■□□□□ 0.78
RPL28-204ENST00000431533 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
RPL28-204ENST00000431533 BBOX1O75936 387 aa19.9■□□□□ 0.78
RPL28-204ENST00000431533 GNAI1P63096 354 aa19.9■□□□□ 0.78
RPL28-204ENST00000431533 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
RPL28-204ENST00000431533 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
RPL28-204ENST00000431533 IFT57Q9NWB7 429 aa19.89■□□□□ 0.77
RPL28-204ENST00000431533 CHPF2Q9P2E5 772 aa19.89■□□□□ 0.77
RPL28-204ENST00000431533 SCNN1DP51172 638 aa19.88■□□□□ 0.77
RPL28-204ENST00000431533 DUSP27Q5VZP5 1158 aa19.88■□□□□ 0.77
RPL28-204ENST00000431533 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
RPL28-204ENST00000431533 ZNRF3Q9ULT6 936 aa19.88■□□□□ 0.77
RPL28-204ENST00000431533 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
RPL28-204ENST00000431533 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
RPL28-204ENST00000431533 ZNF853P0CG23 659 aa19.87■□□□□ 0.77
RPL28-204ENST00000431533 EPS15P42566 896 aa19.87■□□□□ 0.77
RPL28-204ENST00000431533 LBX1P52954 281 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms