RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 DDX21Q9NR30 783 aaKnown RBP eCLIP19.75■□□□□ 0.753e-6■■■□□ 18.6
HERC3-206ENST00000431413 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
HERC3-206ENST00000431413 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
HERC3-206ENST00000431413 IQCA1LA6NCM1 817 aa19.74■□□□□ 0.75
HERC3-206ENST00000431413 DDNO94850 711 aaPredicted RBP19.74■□□□□ 0.75
HERC3-206ENST00000431413 ANXA1P04083 346 aa19.74■□□□□ 0.75
HERC3-206ENST00000431413 XAGE3Q8WTP9 111 aa19.74■□□□□ 0.75
HERC3-206ENST00000431413 CFAP44Q96MT7 982 aa19.74■□□□□ 0.75
HERC3-206ENST00000431413 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
HERC3-206ENST00000431413 ZNF277Q9NRM2 450 aaPredicted RBP19.74■□□□□ 0.75
HERC3-206ENST00000431413 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
HERC3-206ENST00000431413 POTECB2RU33 542 aa19.73■□□□□ 0.75
HERC3-206ENST00000431413 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
HERC3-206ENST00000431413 HDGFL1Q5TGJ6 251 aa19.73■□□□□ 0.75
HERC3-206ENST00000431413 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
HERC3-206ENST00000431413 CRAMP1Q96RY5 1269 aa19.73■□□□□ 0.75
HERC3-206ENST00000431413 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
HERC3-206ENST00000431413 SYNE4Q8N205 404 aa19.72■□□□□ 0.75
HERC3-206ENST00000431413 JDP2Q8WYK2 163 aa19.72■□□□□ 0.75
HERC3-206ENST00000431413 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
HERC3-206ENST00000431413 PSMD1Q99460 953 aa19.72■□□□□ 0.75
HERC3-206ENST00000431413 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
HERC3-206ENST00000431413 IARSP41252 1262 aaKnown RBP19.71■□□□□ 0.75
HERC3-206ENST00000431413 SLC10A5Q5PT55 438 aa19.71■□□□□ 0.75
HERC3-206ENST00000431413 DBF4Q9UBU7 674 aaPredicted RBP19.71■□□□□ 0.75
HERC3-206ENST00000431413 TCIRG1Q13488 830 aa19.7■□□□□ 0.74
HERC3-206ENST00000431413 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
HERC3-206ENST00000431413 CHPF2Q9P2E5 772 aa19.7■□□□□ 0.74
HERC3-206ENST00000431413 APAF1O14727 1248 aa19.69■□□□□ 0.74
HERC3-206ENST00000431413 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
HERC3-206ENST00000431413 GNAI1P63096 354 aa19.69■□□□□ 0.74
HERC3-206ENST00000431413 NLRP10Q86W26 655 aa19.69■□□□□ 0.74
HERC3-206ENST00000431413 KLRG1Q96E93 195 aa19.69■□□□□ 0.74
HERC3-206ENST00000431413 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
HERC3-206ENST00000431413 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
HERC3-206ENST00000431413 HTRA3P83110 453 aa19.68■□□□□ 0.74
HERC3-206ENST00000431413 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
HERC3-206ENST00000431413 CHADLQ6NUI6 762 aa19.68■□□□□ 0.74
HERC3-206ENST00000431413 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
HERC3-206ENST00000431413 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
HERC3-206ENST00000431413 ANKRD13DQ6ZTN6 518 aa19.67■□□□□ 0.74
HERC3-206ENST00000431413 PLBD2Q8NHP8 589 aa19.67■□□□□ 0.74
HERC3-206ENST00000431413 CHMP4AQ9BY43 222 aa19.67■□□□□ 0.74
HERC3-206ENST00000431413 IFT57Q9NWB7 429 aa19.67■□□□□ 0.74
HERC3-206ENST00000431413 SH3TC1Q8TE82 1336 aa19.67■□□□□ 0.74
HERC3-206ENST00000431413 FZD9O00144 591 aa19.66■□□□□ 0.74
HERC3-206ENST00000431413 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
HERC3-206ENST00000431413 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
HERC3-206ENST00000431413 BBOX1O75936 387 aa19.65■□□□□ 0.74
HERC3-206ENST00000431413 EIF6P56537 245 aaKnown RBP19.65■□□□□ 0.74
HERC3-206ENST00000431413 C3orf67Q6ZVT6 689 aa19.65■□□□□ 0.74
HERC3-206ENST00000431413 GPC2Q8N158 579 aa19.65■□□□□ 0.74
HERC3-206ENST00000431413 LARGE2Q8N3Y3 721 aa19.65■□□□□ 0.74
HERC3-206ENST00000431413 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
HERC3-206ENST00000431413 ZNF853P0CG23 659 aa19.64■□□□□ 0.73
HERC3-206ENST00000431413 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
HERC3-206ENST00000431413 LDHDQ86WU2 507 aa19.64■□□□□ 0.73
HERC3-206ENST00000431413 TAF1DQ9H5J8 278 aaPredicted RBP19.64■□□□□ 0.73
HERC3-206ENST00000431413 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
HERC3-206ENST00000431413 SNED1Q8TER0 1413 aa19.63■□□□□ 0.73
HERC3-206ENST00000431413 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
HERC3-206ENST00000431413 PNMA8AQ86V59 439 aaPredicted RBP19.63■□□□□ 0.73
HERC3-206ENST00000431413 SUPT20HQ8NEM7 779 aa19.63■□□□□ 0.73
HERC3-206ENST00000431413 VPS33BQ9H267 617 aa19.63■□□□□ 0.73
HERC3-206ENST00000431413 ABCC4O15439 1325 aa19.62■□□□□ 0.73
HERC3-206ENST00000431413 JMYQ8N9B5 988 aa19.62■□□□□ 0.73
HERC3-206ENST00000431413 SCN4AP35499 1836 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 POTEIP0CG38 1075 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 POTEJP0CG39 1038 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 EPHX2P34913 555 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 EAPPQ56P03 285 aaPredicted RBP19.61■□□□□ 0.73
HERC3-206ENST00000431413 SP8Q8IXZ3 490 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 NIM1KQ8IY84 436 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
HERC3-206ENST00000431413 ANKRD36CQ5JPF3 1778 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
HERC3-206ENST00000431413 PPIP5K2O43314 1243 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 LMOD1P29536 600 aaPredicted RBP19.6■□□□□ 0.73
HERC3-206ENST00000431413 DPP8Q6V1X1 898 aaPredicted RBP19.6■□□□□ 0.73
HERC3-206ENST00000431413 TMC4Q7Z404 712 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 ISCA1Q9BUE6 129 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 GJA3Q9Y6H8 435 aa19.6■□□□□ 0.73
HERC3-206ENST00000431413 ATP5J2-PTCD1G3V325 749 aa19.59■□□□□ 0.73
HERC3-206ENST00000431413 HSP90B1P14625 803 aaKnown RBP19.59■□□□□ 0.73
HERC3-206ENST00000431413 TRIM28Q13263 835 aaKnown RBP19.59■□□□□ 0.73
HERC3-206ENST00000431413 GRAPQ13588 217 aa19.59■□□□□ 0.73
HERC3-206ENST00000431413 MPNDQ8N594 471 aa19.59■□□□□ 0.73
HERC3-206ENST00000431413 GRAPLQ8TC17 118 aaPredicted RBP19.59■□□□□ 0.73
HERC3-206ENST00000431413 CREBZFQ9NS37 354 aa19.59■□□□□ 0.73
HERC3-206ENST00000431413 IFFO2Q5TF58 517 aa19.58■□□□□ 0.72
HERC3-206ENST00000431413 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.72
HERC3-206ENST00000431413 FAM89AQ96GI7 184 aa19.58■□□□□ 0.72
HERC3-206ENST00000431413 RTFDC1Q9BY42 306 aaPredicted RBP19.57■□□□□ 0.72
HERC3-206ENST00000431413 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
HERC3-206ENST00000431413 AOC3Q16853 763 aa19.56■□□□□ 0.72
HERC3-206ENST00000431413 ANP32CO43423 234 aa19.55■□□□□ 0.72
HERC3-206ENST00000431413 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
HERC3-206ENST00000431413 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms