RNA–Protein interactions for RNA: ENST00000430978.6

LINC00454-202, long intergenic non-protein coding RNA 454, humanhuman

TSL 5 BASIC

Gene LINC00454, Length 1,327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-202ENST00000430978 SOGA3Q5TF21 947 aa28.16■■■□□ 2.1
LINC00454-202ENST00000430978 IL16Q14005 1332 aa28.15■■■□□ 2.1
LINC00454-202ENST00000430978 C1QTNF8P60827 252 aa28.15■■■□□ 2.1
LINC00454-202ENST00000430978 CCDC30Q5VVM6 783 aa28.15■■■□□ 2.1
LINC00454-202ENST00000430978 RPGRQ92834 1020 aaKnown RBP28.15■■■□□ 2.1
LINC00454-202ENST00000430978 NFKBIEO00221 500 aa28.14■■■□□ 2.09
LINC00454-202ENST00000430978 NLRP10Q86W26 655 aa28.14■■■□□ 2.09
LINC00454-202ENST00000430978 TSPYL6Q8N831 410 aa28.14■■■□□ 2.09
LINC00454-202ENST00000430978 GOLGA2Q08379 1002 aa28.12■■■□□ 2.09
LINC00454-202ENST00000430978 CRY2Q49AN0 593 aa28.12■■■□□ 2.09
LINC00454-202ENST00000430978 RIC3Q7Z5B4 369 aa28.12■■■□□ 2.09
LINC00454-202ENST00000430978 WDR63Q8IWG1 891 aa28.12■■■□□ 2.09
LINC00454-202ENST00000430978 NLRP3Q96P20 1036 aa28.12■■■□□ 2.09
LINC00454-202ENST00000430978 TRMT112Q9UI30 125 aaKnown RBP28.12■■■□□ 2.09
LINC00454-202ENST00000430978 TAOK3Q9H2K8 898 aa28.11■■■□□ 2.09
LINC00454-202ENST00000430978 PHAXQ9H814 394 aaKnown RBP28.11■■■□□ 2.09
LINC00454-202ENST00000430978 RNF123Q5XPI4 1314 aa28.1■■■□□ 2.09
LINC00454-202ENST00000430978 RIC1Q4ADV7 1423 aa28.1■■■□□ 2.09
LINC00454-202ENST00000430978 CCDC93Q567U6 631 aa28.1■■■□□ 2.09
LINC00454-202ENST00000430978 PRELPP51888 382 aa28.09■■■□□ 2.09
LINC00454-202ENST00000430978 TWISTNBQ3B726 338 aaPredicted RBP28.09■■■□□ 2.09
LINC00454-202ENST00000430978 SLC10A5Q5PT55 438 aa28.09■■■□□ 2.09
LINC00454-202ENST00000430978 C7orf43Q8WVR3 580 aa28.09■■■□□ 2.09
LINC00454-202ENST00000430978 ZNF428Q96B54 188 aa28.09■■■□□ 2.09
LINC00454-202ENST00000430978 RBM17Q96I25 401 aaKnown RBP28.09■■■□□ 2.09
LINC00454-202ENST00000430978 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
LINC00454-202ENST00000430978 DICER1Q9UPY3 1922 aaKnown RBP28.08■■■□□ 2.09
LINC00454-202ENST00000430978 ATP5J2-PTCD1G3V325 749 aa28.08■■■□□ 2.09
LINC00454-202ENST00000430978 STK31Q9BXU1 1019 aa28.08■■■□□ 2.09
LINC00454-202ENST00000430978 SH3TC1Q8TE82 1336 aa28.07■■■□□ 2.08
LINC00454-202ENST00000430978 LTBP3Q9NS15 1303 aa28.07■■■□□ 2.08
LINC00454-202ENST00000430978 ZC3H4Q9UPT8 1303 aaKnown RBP28.07■■■□□ 2.08
LINC00454-202ENST00000430978 DDX58O95786 925 aaKnown RBP28.06■■■□□ 2.08
LINC00454-202ENST00000430978 HCLS1P14317 486 aaPredicted RBP28.06■■■□□ 2.08
LINC00454-202ENST00000430978 HOXA10P31260 410 aaPredicted RBP28.06■■■□□ 2.08
LINC00454-202ENST00000430978 ISCA1Q9BUE6 129 aa28.06■■■□□ 2.08
LINC00454-202ENST00000430978 TIAM2Q8IVF5 1701 aa28.06■■■□□ 2.08
LINC00454-202ENST00000430978 FANCIQ9NVI1 1328 aa28.06■■■□□ 2.08
LINC00454-202ENST00000430978 TCERG1O14776 1098 aaKnown RBP28.05■■■□□ 2.08
LINC00454-202ENST00000430978 C3orf67Q6ZVT6 689 aa28.05■■■□□ 2.08
LINC00454-202ENST00000430978 RTKN2Q8IZC4 609 aa28.05■■■□□ 2.08
LINC00454-202ENST00000430978 SYNE4Q8N205 404 aa28.05■■■□□ 2.08
LINC00454-202ENST00000430978 NMRK2Q9NPI5 230 aa28.05■■■□□ 2.08
LINC00454-202ENST00000430978 KIF3CO14782 793 aa28.04■■■□□ 2.08
LINC00454-202ENST00000430978 OLFM4Q6UX06 510 aa28.04■■■□□ 2.08
LINC00454-202ENST00000430978 CRAMP1Q96RY5 1269 aa28.04■■■□□ 2.08
LINC00454-202ENST00000430978 LAMB2P55268 1798 aa28.03■■■□□ 2.08
LINC00454-202ENST00000430978 MYD88Q99836 296 aa28.02■■■□□ 2.08
LINC00454-202ENST00000430978 FKBP4Q02790 459 aaKnown RBP eCLIP28.01■■■□□ 2.07
LINC00454-202ENST00000430978 FAM89AQ96GI7 184 aa28.01■■■□□ 2.07
LINC00454-202ENST00000430978 SLC4A2P04920 1241 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 TRIM28Q13263 835 aaKnown RBP28■■■□□ 2.07
LINC00454-202ENST00000430978 RTL5Q5HYW3 569 aaPredicted RBP28■■■□□ 2.07
LINC00454-202ENST00000430978 CC2D2BQ6DHV5 1058 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 DPY19L2Q6NUT2 758 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 TMX4Q9H1E5 349 aaPredicted RBP28■■■□□ 2.07
LINC00454-202ENST00000430978 MYH16Q9H6N6 1097 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 RRAGCQ9HB90 399 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 CACNA1FO60840 1977 aa28■■■□□ 2.07
LINC00454-202ENST00000430978 GLTPD2A6NH11 291 aa27.99■■■□□ 2.07
LINC00454-202ENST00000430978 PPEF1O14829 653 aaPredicted RBP27.99■■■□□ 2.07
LINC00454-202ENST00000430978 EXOSC9Q06265 439 aaKnown RBP27.99■■■□□ 2.07
LINC00454-202ENST00000430978 C16orf71Q8IYS4 520 aaPredicted RBP27.99■■■□□ 2.07
LINC00454-202ENST00000430978 DDX46Q7L014 1031 aaKnown RBP27.97■■■□□ 2.07
LINC00454-202ENST00000430978 METTL22Q9BUU2 404 aaPredicted RBP27.97■■■□□ 2.07
LINC00454-202ENST00000430978 SPINK5Q9NQ38 1064 aaPredicted RBP27.97■■■□□ 2.07
LINC00454-202ENST00000430978 ZNF277Q9NRM2 450 aaPredicted RBP27.97■■■□□ 2.07
LINC00454-202ENST00000430978 MAP3K2Q9Y2U5 619 aa27.97■■■□□ 2.07
LINC00454-202ENST00000430978 DDX60Q8IY21 1712 aaKnown RBP27.97■■■□□ 2.07
LINC00454-202ENST00000430978 KSR2Q6VAB6 950 aa27.96■■■□□ 2.07
LINC00454-202ENST00000430978 ABCC4O15439 1325 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 PI4KAP2A4QPH2 592 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 VAMP4O75379 141 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 GRIPAP1Q4V328 841 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 PI4KAP1Q8N8J0 262 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 CCDC191Q8NCU4 936 aa27.95■■■□□ 2.07
LINC00454-202ENST00000430978 TAF1P21675 1872 aa27.95■■■□□ 2.06
LINC00454-202ENST00000430978 TOMM70O94826 608 aa27.94■■■□□ 2.06
LINC00454-202ENST00000430978 CCER2I3L3R5 266 aa27.93■■■□□ 2.06
LINC00454-202ENST00000430978 IRS4O14654 1257 aaPredicted RBP27.93■■■□□ 2.06
LINC00454-202ENST00000430978 BBOX1O75936 387 aa27.93■■■□□ 2.06
LINC00454-202ENST00000430978 NEXNQ0ZGT2 675 aa27.93■■■□□ 2.06
LINC00454-202ENST00000430978 G2E3Q7L622 706 aa27.93■■■□□ 2.06
LINC00454-202ENST00000430978 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
LINC00454-202ENST00000430978 PSMD1Q99460 953 aa27.93■■■□□ 2.06
LINC00454-202ENST00000430978 CWC25Q9NXE8 425 aaPredicted RBP27.93■■■□□ 2.06
LINC00454-202ENST00000430978 HSP90B1P14625 803 aaKnown RBP27.92■■■□□ 2.06
LINC00454-202ENST00000430978 IARSP41252 1262 aaKnown RBP27.92■■■□□ 2.06
LINC00454-202ENST00000430978 ATP6V0A2Q9Y487 856 aa27.92■■■□□ 2.06
LINC00454-202ENST00000430978 VEGFAP15692 232 aaPredicted RBP27.91■■■□□ 2.06
LINC00454-202ENST00000430978 GRAPQ13588 217 aa27.91■■■□□ 2.06
LINC00454-202ENST00000430978 GRAPLQ8TC17 118 aaPredicted RBP27.91■■■□□ 2.06
LINC00454-202ENST00000430978 FLIIQ13045 1269 aa27.9■■■□□ 2.06
LINC00454-202ENST00000430978 FKBP5Q13451 457 aaPredicted RBP27.9■■■□□ 2.06
LINC00454-202ENST00000430978 SF3B3Q15393 1217 aaKnown RBP27.9■■■□□ 2.06
LINC00454-202ENST00000430978 PCCAP05165 728 aaPredicted RBP27.89■■■□□ 2.05
LINC00454-202ENST00000430978 JDP2Q8WYK2 163 aa27.89■■■□□ 2.05
LINC00454-202ENST00000430978 JARID2Q92833 1246 aaPredicted RBP27.89■■■□□ 2.05
LINC00454-202ENST00000430978 ZNF521Q96K83 1311 aa27.88■■■□□ 2.05
LINC00454-202ENST00000430978 DDNO94850 711 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms