RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 HYPKQ9NX55 129 aa22.77■■□□□ 1.24
NUP50-208ENST00000430547 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
NUP50-208ENST00000430547 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
NUP50-208ENST00000430547 CCDC27Q2M243 656 aa22.75■■□□□ 1.23
NUP50-208ENST00000430547 CRY2Q49AN0 593 aa22.75■■□□□ 1.23
NUP50-208ENST00000430547 C16orf71Q8IYS4 520 aaPredicted RBP22.75■■□□□ 1.23
NUP50-208ENST00000430547 CHMP4AQ9BY43 222 aa22.75■■□□□ 1.23
NUP50-208ENST00000430547 RNF123Q5XPI4 1314 aa22.75■■□□□ 1.23
NUP50-208ENST00000430547 PRELPP51888 382 aa22.74■■□□□ 1.23
NUP50-208ENST00000430547 TCIRG1Q13488 830 aa22.74■■□□□ 1.23
NUP50-208ENST00000430547 PLBD2Q8NHP8 589 aa22.74■■□□□ 1.23
NUP50-208ENST00000430547 LAMB2P55268 1798 aa22.73■■□□□ 1.23
NUP50-208ENST00000430547 ANKRD13DQ6ZTN6 518 aa22.73■■□□□ 1.23
NUP50-208ENST00000430547 WWC1Q8IX03 1113 aa22.73■■□□□ 1.23
NUP50-208ENST00000430547 NLRP3Q96P20 1036 aa22.73■■□□□ 1.23
NUP50-208ENST00000430547 NLRP10Q86W26 655 aa22.72■■□□□ 1.23
NUP50-208ENST00000430547 C7orf43Q8WVR3 580 aa22.72■■□□□ 1.23
NUP50-208ENST00000430547 RBM17Q96I25 401 aaKnown RBP22.72■■□□□ 1.23
NUP50-208ENST00000430547 TRMT112Q9UI30 125 aaKnown RBP22.72■■□□□ 1.23
NUP50-208ENST00000430547 TOMM70O94826 608 aa22.71■■□□□ 1.23
NUP50-208ENST00000430547 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
NUP50-208ENST00000430547 DPY19L2Q6NUT2 758 aa22.71■■□□□ 1.23
NUP50-208ENST00000430547 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
NUP50-208ENST00000430547 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
NUP50-208ENST00000430547 GLTPD2A6NH11 291 aa22.7■■□□□ 1.22
NUP50-208ENST00000430547 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
NUP50-208ENST00000430547 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.22
NUP50-208ENST00000430547 RRAGCQ9HB90 399 aa22.7■■□□□ 1.22
NUP50-208ENST00000430547 SH3TC1Q8TE82 1336 aa22.69■■□□□ 1.22
NUP50-208ENST00000430547 HOXA10P31260 410 aaPredicted RBP22.69■■□□□ 1.22
NUP50-208ENST00000430547 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
NUP50-208ENST00000430547 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
NUP50-208ENST00000430547 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
NUP50-208ENST00000430547 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
NUP50-208ENST00000430547 IL16Q14005 1332 aa22.68■■□□□ 1.22
NUP50-208ENST00000430547 SLC10A5Q5PT55 438 aa22.68■■□□□ 1.22
NUP50-208ENST00000430547 CRAMP1Q96RY5 1269 aa22.68■■□□□ 1.22
NUP50-208ENST00000430547 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
NUP50-208ENST00000430547 CC2D2BQ6DHV5 1058 aa22.67■■□□□ 1.22
NUP50-208ENST00000430547 OLFM4Q6UX06 510 aa22.67■■□□□ 1.22
NUP50-208ENST00000430547 TMX4Q9H1E5 349 aaPredicted RBP22.67■■□□□ 1.22
NUP50-208ENST00000430547 DDX60Q8IY21 1712 aaKnown RBP22.67■■□□□ 1.22
NUP50-208ENST00000430547 PPEF1O14829 653 aaPredicted RBP22.66■■□□□ 1.22
NUP50-208ENST00000430547 C3orf67Q6ZVT6 689 aa22.66■■□□□ 1.22
NUP50-208ENST00000430547 STK31Q9BXU1 1019 aa22.66■■□□□ 1.22
NUP50-208ENST00000430547 PHAXQ9H814 394 aaKnown RBP22.66■■□□□ 1.22
NUP50-208ENST00000430547 WDR90Q96KV7 1748 aa22.65■■□□□ 1.22
NUP50-208ENST00000430547 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
NUP50-208ENST00000430547 DDX58O95786 925 aaKnown RBP22.65■■□□□ 1.22
NUP50-208ENST00000430547 HCLS1P14317 486 aaPredicted RBP22.65■■□□□ 1.22
NUP50-208ENST00000430547 HSPA6P17066 643 aa22.65■■□□□ 1.22
NUP50-208ENST00000430547 TSPYL6Q8N831 410 aa22.65■■□□□ 1.22
NUP50-208ENST00000430547 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
NUP50-208ENST00000430547 ZNF428Q96B54 188 aa22.65■■□□□ 1.22
NUP50-208ENST00000430547 ZNF277Q9NRM2 450 aaPredicted RBP22.65■■□□□ 1.22
NUP50-208ENST00000430547 CACNA1FO60840 1977 aa22.64■■□□□ 1.21
NUP50-208ENST00000430547 TCERG1O14776 1098 aaKnown RBP22.64■■□□□ 1.21
NUP50-208ENST00000430547 VEGFAP15692 232 aaPredicted RBP22.64■■□□□ 1.21
NUP50-208ENST00000430547 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
NUP50-208ENST00000430547 ISCA1Q9BUE6 129 aa22.64■■□□□ 1.21
NUP50-208ENST00000430547 TWISTNBQ3B726 338 aaPredicted RBP22.63■■□□□ 1.21
NUP50-208ENST00000430547 WDR63Q8IWG1 891 aa22.63■■□□□ 1.21
NUP50-208ENST00000430547 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
NUP50-208ENST00000430547 PSMD1Q99460 953 aa22.63■■□□□ 1.21
NUP50-208ENST00000430547 ABCC4O15439 1325 aa22.62■■□□□ 1.21
NUP50-208ENST00000430547 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
NUP50-208ENST00000430547 DDX46Q7L014 1031 aaKnown RBP22.62■■□□□ 1.21
NUP50-208ENST00000430547 TAF1P21675 1872 aa22.62■■□□□ 1.21
NUP50-208ENST00000430547 FAM89AQ96GI7 184 aa22.61■■□□□ 1.21
NUP50-208ENST00000430547 MYD88Q99836 296 aa22.61■■□□□ 1.21
NUP50-208ENST00000430547 FANCIQ9NVI1 1328 aa22.6■■□□□ 1.21
NUP50-208ENST00000430547 TRIM28Q13263 835 aaKnown RBP22.6■■□□□ 1.21
NUP50-208ENST00000430547 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
NUP50-208ENST00000430547 SNED1Q8TER0 1413 aa22.59■■□□□ 1.21
NUP50-208ENST00000430547 FSTL1Q12841 308 aa22.59■■□□□ 1.21
NUP50-208ENST00000430547 JDP2Q8WYK2 163 aa22.59■■□□□ 1.21
NUP50-208ENST00000430547 SCN4AP35499 1836 aa22.59■■□□□ 1.21
NUP50-208ENST00000430547 BBOX1O75936 387 aa22.58■■□□□ 1.21
NUP50-208ENST00000430547 DDNO94850 711 aaPredicted RBP22.58■■□□□ 1.21
NUP50-208ENST00000430547 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
NUP50-208ENST00000430547 SMC1BQ8NDV3 1235 aa22.58■■□□□ 1.21
NUP50-208ENST00000430547 ATP6V0A2Q9Y487 856 aa22.58■■□□□ 1.21
NUP50-208ENST00000430547 GRAPQ13588 217 aa22.57■■□□□ 1.2
NUP50-208ENST00000430547 GRAPLQ8TC17 118 aaPredicted RBP22.57■■□□□ 1.2
NUP50-208ENST00000430547 METTL22Q9BUU2 404 aaPredicted RBP22.57■■□□□ 1.2
NUP50-208ENST00000430547 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
NUP50-208ENST00000430547 APLP1P51693 650 aa22.56■■□□□ 1.2
NUP50-208ENST00000430547 ZBTB38Q8NAP3 1195 aaPredicted RBP22.56■■□□□ 1.2
NUP50-208ENST00000430547 CCDC191Q8NCU4 936 aa22.56■■□□□ 1.2
NUP50-208ENST00000430547 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
NUP50-208ENST00000430547 CWC25Q9NXE8 425 aaPredicted RBP22.56■■□□□ 1.2
NUP50-208ENST00000430547 MAP3K2Q9Y2U5 619 aa22.56■■□□□ 1.2
NUP50-208ENST00000430547 CEP350Q5VT06 3117 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 SLC4A2P04920 1241 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 NEXNQ0ZGT2 675 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 KSR2Q6VAB6 950 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 SUPT20HQ8NEM7 779 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 ZNF541Q9H0D2 1346 aa22.55■■□□□ 1.2
NUP50-208ENST00000430547 PI4KAP2A4QPH2 592 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms