RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 ANAPC15P60006 121 aa16.95■□□□□ 0.3
RBM39-212ENST00000429968 PTH1RQ03431 593 aa16.95■□□□□ 0.3
RBM39-212ENST00000429968 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
RBM39-212ENST00000429968 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
RBM39-212ENST00000429968 A1BGP04217 495 aa16.94■□□□□ 0.3
RBM39-212ENST00000429968 CASP7P55210 303 aa16.94■□□□□ 0.3
RBM39-212ENST00000429968 MCCP23508 829 aa16.94■□□□□ 0.3
RBM39-212ENST00000429968 SNX14Q9Y5W7 946 aa16.94■□□□□ 0.3
RBM39-212ENST00000429968 G3BP1Q13283 466 aaKnown RBP eCLIP16.93■□□□□ 0.3
RBM39-212ENST00000429968 ERC1Q8IUD2 1116 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
RBM39-212ENST00000429968 ITGB4P16144 1822 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.33e-9■■□□□ 12.4
RBM39-212ENST00000429968 IL2RBP14784 551 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 CPA1P15085 419 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 PTPN12Q05209 780 aaKnown RBP16.93■□□□□ 0.3
RBM39-212ENST00000429968 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
RBM39-212ENST00000429968 LARP6Q9BRS8 491 aaKnown RBP16.93■□□□□ 0.3
RBM39-212ENST00000429968 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
RBM39-212ENST00000429968 CUL4AQ13619 759 aa16.92■□□□□ 0.3
RBM39-212ENST00000429968 FOXD4L5Q5VV16 416 aaPredicted RBP16.92■□□□□ 0.3
RBM39-212ENST00000429968 FOXD4L4Q8WXT5 416 aaPredicted RBP16.92■□□□□ 0.3
RBM39-212ENST00000429968 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
RBM39-212ENST00000429968 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
RBM39-212ENST00000429968 A0A087WZG4 1122 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
RBM39-212ENST00000429968 GAS2L3Q86XJ1 694 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 NDUFB9Q9Y6M9 179 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 TNS2Q63HR2 1409 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 TCHHQ07283 1943 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 RABL6Q3YEC7 729 aaPredicted RBP16.91■□□□□ 0.3
RBM39-212ENST00000429968 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
RBM39-212ENST00000429968 DTNBO60941 627 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 CHGBP05060 677 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 NUCB2P80303 420 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
RBM39-212ENST00000429968 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 ERVV-2B6SEH9 535 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 TTC14Q96N46 770 aa16.9■□□□□ 0.3
RBM39-212ENST00000429968 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
RBM39-212ENST00000429968 TFCP2Q12800 502 aa16.89■□□□□ 0.29
RBM39-212ENST00000429968 ADCK5Q3MIX3 580 aa16.89■□□□□ 0.29
RBM39-212ENST00000429968 COPRSQ9NQ92 184 aa16.89■□□□□ 0.29
RBM39-212ENST00000429968 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
RBM39-212ENST00000429968 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 FOXO4P98177 505 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
RBM39-212ENST00000429968 EVI5LQ96CN4 794 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
RBM39-212ENST00000429968 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 LMBRD1Q9NUN5 540 aa16.88■□□□□ 0.29
RBM39-212ENST00000429968 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 TAF6LQ9Y6J9 622 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 COL15A1P39059 1388 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 LARGE1O95461 756 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 AK2P54819 239 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 EVA1CP58658 441 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
RBM39-212ENST00000429968 RUFY3Q7L099 469 aa16.87■□□□□ 0.29
RBM39-212ENST00000429968 H7C1W4 665 aa16.86■□□□□ 0.29
RBM39-212ENST00000429968 MCM2P49736 904 aa16.86■□□□□ 0.29
RBM39-212ENST00000429968 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
RBM39-212ENST00000429968 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
RBM39-212ENST00000429968 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
RBM39-212ENST00000429968 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
RBM39-212ENST00000429968 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
RBM39-212ENST00000429968 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 BRD1O95696 1058 aa16.84■□□□□ 0.29
RBM39-212ENST00000429968 CASTP20810 708 aaKnown RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
RBM39-212ENST00000429968 NSFL1CQ9UNZ2 370 aaKnown RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 GPT2Q8TD30 523 aa16.84■□□□□ 0.29
RBM39-212ENST00000429968 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
RBM39-212ENST00000429968 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
RBM39-212ENST00000429968 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
RBM39-212ENST00000429968 ROBO1Q9Y6N7 1651 aa16.83■□□□□ 0.29
RBM39-212ENST00000429968 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
RBM39-212ENST00000429968 ATG9AQ7Z3C6 839 aa16.83■□□□□ 0.28
RBM39-212ENST00000429968 PIGBQ92521 554 aa16.83■□□□□ 0.28
RBM39-212ENST00000429968 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
RBM39-212ENST00000429968 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
RBM39-212ENST00000429968 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
RBM39-212ENST00000429968 RBM8AQ9Y5S9 174 aaKnown RBP16.83■□□□□ 0.28
RBM39-212ENST00000429968 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
RBM39-212ENST00000429968 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
RBM39-212ENST00000429968 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
RBM39-212ENST00000429968 KCNB2Q92953 911 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms