RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 GZF1Q9H116 711 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-205ENST00000429662 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-205ENST00000429662 NFAT5O94916 1531 aa10.65□□□□□ -0.7
GABPB1-205ENST00000429662 DLG5Q8TDM6 1919 aa10.65□□□□□ -0.7
GABPB1-205ENST00000429662 GNAI3P08754 354 aa10.65□□□□□ -0.71
GABPB1-205ENST00000429662 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.71
GABPB1-205ENST00000429662 JMYQ8N9B5 988 aa10.65□□□□□ -0.71
GABPB1-205ENST00000429662 ANP32BQ92688 251 aaKnown RBP10.65□□□□□ -0.71
GABPB1-205ENST00000429662 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.71
GABPB1-205ENST00000429662 FLT4P35916 1363 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 KDRP35968 1356 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 ERC2O15083 957 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 DCTN1Q14203 1278 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 SLC16A10Q8TF71 515 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 STK31Q9BXU1 1019 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 SRCIN1Q9C0H9 1055 aa10.64□□□□□ -0.71
GABPB1-205ENST00000429662 DOT1LQ8TEK3 1739 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 GRIN3BO60391 1043 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 BAG4O95429 457 aaKnown RBP10.63□□□□□ -0.71
GABPB1-205ENST00000429662 GNAI2P04899 355 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 SDSP20132 328 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 MCCP23508 829 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 PSEN1P49768 467 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 TRIM44Q96DX7 344 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-205ENST00000429662 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
GABPB1-205ENST00000429662 TAF1LQ8IZX4 1826 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 AOX1Q06278 1338 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 APLP1P51693 650 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 ANAPC15P60006 121 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 CCDC173Q0VFZ6 552 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 MCM10Q7L590 875 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-205ENST00000429662 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
GABPB1-205ENST00000429662 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-205ENST00000429662 RRAGDQ9NQL2 400 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-205ENST00000429662 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
GABPB1-205ENST00000429662 CD2BP2O95400 341 aaKnown RBP10.61□□□□□ -0.71
GABPB1-205ENST00000429662 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-205ENST00000429662 ZNF445P59923 1031 aa10.61□□□□□ -0.71
GABPB1-205ENST00000429662 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
GABPB1-205ENST00000429662 HSP90AB2PQ58FF8 381 aa10.61□□□□□ -0.71
GABPB1-205ENST00000429662 KIF13BQ9NQT8 1826 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 C5P01031 1676 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
GABPB1-205ENST00000429662 SSFA2P28290 1259 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 PDE1AP54750 535 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 ATP8B2P98198 1209 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 IL17RAQ96F46 866 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 MEIS3Q99687 375 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
GABPB1-205ENST00000429662 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 DDX49Q9Y6V7 483 aaKnown RBP10.6□□□□□ -0.71
GABPB1-205ENST00000429662 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
GABPB1-205ENST00000429662 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 ESPNB1AK53 854 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 AMPHP49418 695 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 HTRA3P83110 453 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
GABPB1-205ENST00000429662 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-205ENST00000429662 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 PPP1R9BQ96SB3 815 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
GABPB1-205ENST00000429662 KAT6BQ8WYB5 2073 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 RAB11FIP3O75154 756 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 ARHGEF25Q86VW2 580 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
GABPB1-205ENST00000429662 PANK2Q9BZ23 570 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 LTN1O94822 1766 aa10.58□□□□□ -0.72
GABPB1-205ENST00000429662 POLD1P28340 1107 aa10.57□□□□□ -0.72
GABPB1-205ENST00000429662 KCNQ4P56696 695 aa10.57□□□□□ -0.72
GABPB1-205ENST00000429662 KLRG1Q96E93 195 aa10.57□□□□□ -0.72
GABPB1-205ENST00000429662 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-205ENST00000429662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.72
GABPB1-205ENST00000429662 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
GABPB1-205ENST00000429662 UBR3Q6ZT12 1888 aa10.57□□□□□ -0.72
GABPB1-205ENST00000429662 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 SNPHO15079 494 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 MBD3O95983 291 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 HOXB7P09629 217 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-205ENST00000429662 FLIIQ13045 1269 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 TAF7Q15545 349 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-205ENST00000429662 KRT24Q2M2I5 525 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 EYA1Q99502 592 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 ESYT1Q9BSJ8 1104 aa10.56□□□□□ -0.72
GABPB1-205ENST00000429662 FAM208AQ9UK61 1670 aaKnown RBP10.56□□□□□ -0.72
GABPB1-205ENST00000429662 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 MX1P20591 662 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
GABPB1-205ENST00000429662 CUL4AQ13619 759 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 MCTP1Q6DN14 999 aa10.55□□□□□ -0.72
GABPB1-205ENST00000429662 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms