RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 RNF181Q9P0P0 153 aa23.44■■□□□ 1.34
SSR4P1-202ENST00000429427 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 FANCIQ9NVI1 1328 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 SYNE4Q8N205 404 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 ZNF428Q96B54 188 aa23.43■■□□□ 1.34
SSR4P1-202ENST00000429427 SLC51AQ86UW1 340 aa23.42■■□□□ 1.34
SSR4P1-202ENST00000429427 UTP14AQ9BVJ6 771 aaKnown RBP23.42■■□□□ 1.34
SSR4P1-202ENST00000429427 GPBP1L1Q9HC44 474 aaPredicted RBP23.42■■□□□ 1.34
SSR4P1-202ENST00000429427 HSP90AB3PQ58FF7 597 aa23.41■■□□□ 1.34
SSR4P1-202ENST00000429427 PPP1R42Q7Z4L9 355 aa23.41■■□□□ 1.34
SSR4P1-202ENST00000429427 WDR63Q8IWG1 891 aa23.41■■□□□ 1.34
SSR4P1-202ENST00000429427 ISCA1Q9BUE6 129 aa23.41■■□□□ 1.34
SSR4P1-202ENST00000429427 SNED1Q8TER0 1413 aa23.41■■□□□ 1.34
SSR4P1-202ENST00000429427 LMNB1P20700 586 aa23.4■■□□□ 1.34
SSR4P1-202ENST00000429427 ZNF521Q96K83 1311 aa23.39■■□□□ 1.34
SSR4P1-202ENST00000429427 TCERG1O14776 1098 aaKnown RBP23.39■■□□□ 1.33
SSR4P1-202ENST00000429427 HOXA10P31260 410 aaPredicted RBP23.39■■□□□ 1.33
SSR4P1-202ENST00000429427 SLC10A5Q5PT55 438 aa23.39■■□□□ 1.33
SSR4P1-202ENST00000429427 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
SSR4P1-202ENST00000429427 TWISTNBQ3B726 338 aaPredicted RBP23.38■■□□□ 1.33
SSR4P1-202ENST00000429427 LTBP3Q9NS15 1303 aa23.37■■□□□ 1.33
SSR4P1-202ENST00000429427 TIAM2Q8IVF5 1701 aa23.37■■□□□ 1.33
SSR4P1-202ENST00000429427 KIF3CO14782 793 aa23.37■■□□□ 1.33
SSR4P1-202ENST00000429427 CCDC30Q5VVM6 783 aa23.37■■□□□ 1.33
SSR4P1-202ENST00000429427 LAMB2P55268 1798 aa23.37■■□□□ 1.33
SSR4P1-202ENST00000429427 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
SSR4P1-202ENST00000429427 HCLS1P14317 486 aaPredicted RBP23.36■■□□□ 1.33
SSR4P1-202ENST00000429427 C1QTNF8P60827 252 aa23.36■■□□□ 1.33
SSR4P1-202ENST00000429427 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
SSR4P1-202ENST00000429427 CCDC88AQ3V6T2 1871 aa23.35■■□□□ 1.33
SSR4P1-202ENST00000429427 TAOK3Q9H2K8 898 aa23.35■■□□□ 1.33
SSR4P1-202ENST00000429427 NMRK2Q9NPI5 230 aa23.35■■□□□ 1.33
SSR4P1-202ENST00000429427 DDX60Q8IY21 1712 aaKnown RBP23.34■■□□□ 1.33
SSR4P1-202ENST00000429427 ALDH1B1P30837 517 aa23.34■■□□□ 1.33
SSR4P1-202ENST00000429427 G2E3Q7L622 706 aa23.34■■□□□ 1.33
SSR4P1-202ENST00000429427 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 EXOSC9Q06265 439 aaKnown RBP23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 TRIM28Q13263 835 aaKnown RBP23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 SOGA3Q5TF21 947 aa23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 RPGRQ92834 1020 aaKnown RBP23.33■■□□□ 1.33
SSR4P1-202ENST00000429427 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.32
SSR4P1-202ENST00000429427 VAMP4O75379 141 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 FAM89AQ96GI7 184 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 NLRP3Q96P20 1036 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 CRAMP1Q96RY5 1269 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 COL4A1P02462 1669 aa23.32■■□□□ 1.32
SSR4P1-202ENST00000429427 MYD88Q99836 296 aa23.31■■□□□ 1.32
SSR4P1-202ENST00000429427 ABCC4O15439 1325 aa23.31■■□□□ 1.32
SSR4P1-202ENST00000429427 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
SSR4P1-202ENST00000429427 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
SSR4P1-202ENST00000429427 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
SSR4P1-202ENST00000429427 RTL5Q5HYW3 569 aaPredicted RBP23.29■■□□□ 1.32
SSR4P1-202ENST00000429427 METTL22Q9BUU2 404 aaPredicted RBP23.29■■□□□ 1.32
SSR4P1-202ENST00000429427 MAP3K2Q9Y2U5 619 aa23.29■■□□□ 1.32
SSR4P1-202ENST00000429427 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 SLC4A2P04920 1241 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 STK31Q9BXU1 1019 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 CHMP4AQ9BY43 222 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 ZNF277Q9NRM2 450 aaPredicted RBP23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 COL4A5P29400 1685 aa23.28■■□□□ 1.32
SSR4P1-202ENST00000429427 PPEF1O14829 653 aaPredicted RBP23.27■■□□□ 1.32
SSR4P1-202ENST00000429427 IGKV5-2P06315 115 aa23.27■■□□□ 1.32
SSR4P1-202ENST00000429427 KSR2Q6VAB6 950 aa23.27■■□□□ 1.32
SSR4P1-202ENST00000429427 RTKN2Q8IZC4 609 aa23.27■■□□□ 1.32
SSR4P1-202ENST00000429427 GLTPD2A6NH11 291 aa23.26■■□□□ 1.31
SSR4P1-202ENST00000429427 TAF1P21675 1872 aa23.26■■□□□ 1.31
SSR4P1-202ENST00000429427 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 FLIIQ13045 1269 aa23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 ZBTB38Q8NAP3 1195 aaPredicted RBP23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 MYH16Q9H6N6 1097 aa23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 KDM2BQ8NHM5 1336 aa23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 CEP350Q5VT06 3117 aa23.25■■□□□ 1.31
SSR4P1-202ENST00000429427 IRS4O14654 1257 aaPredicted RBP23.24■■□□□ 1.31
SSR4P1-202ENST00000429427 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
SSR4P1-202ENST00000429427 PSMD1Q99460 953 aa23.24■■□□□ 1.31
SSR4P1-202ENST00000429427 RRAGCQ9HB90 399 aa23.24■■□□□ 1.31
SSR4P1-202ENST00000429427 POTECB2RU33 542 aa23.23■■□□□ 1.31
SSR4P1-202ENST00000429427 SF3B3Q15393 1217 aaKnown RBP23.23■■□□□ 1.31
SSR4P1-202ENST00000429427 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
SSR4P1-202ENST00000429427 PCCAP05165 728 aaPredicted RBP23.22■■□□□ 1.31
SSR4P1-202ENST00000429427 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
SSR4P1-202ENST00000429427 CC2D2BQ6DHV5 1058 aa23.22■■□□□ 1.31
SSR4P1-202ENST00000429427 CWC25Q9NXE8 425 aaPredicted RBP23.22■■□□□ 1.31
SSR4P1-202ENST00000429427 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
SSR4P1-202ENST00000429427 GRAPQ13588 217 aa23.21■■□□□ 1.31
SSR4P1-202ENST00000429427 GRAPLQ8TC17 118 aaPredicted RBP23.21■■□□□ 1.31
SSR4P1-202ENST00000429427 WDR90Q96KV7 1748 aa23.21■■□□□ 1.31
SSR4P1-202ENST00000429427 LRRC37AA6NMS7 1700 aa23.2■■□□□ 1.3
SSR4P1-202ENST00000429427 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.3
SSR4P1-202ENST00000429427 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
SSR4P1-202ENST00000429427 CELF1Q92879 486 aaKnown RBP23.2■■□□□ 1.3
SSR4P1-202ENST00000429427 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms