RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 PLBD2Q8NHP8 589 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 AFF2P51816 1311 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
HIPK2-203ENST00000428878 ERVV-2B6SEH9 535 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
HIPK2-203ENST00000428878 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
HIPK2-203ENST00000428878 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
HIPK2-203ENST00000428878 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 MEGF6O75095 1541 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 KDRP35968 1356 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
HIPK2-203ENST00000428878 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
HIPK2-203ENST00000428878 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
HIPK2-203ENST00000428878 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
HIPK2-203ENST00000428878 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
HIPK2-203ENST00000428878 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
HIPK2-203ENST00000428878 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
HIPK2-203ENST00000428878 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
HIPK2-203ENST00000428878 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
HIPK2-203ENST00000428878 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
HIPK2-203ENST00000428878 CHGBP05060 677 aa13.28□□□□□ -0.28
HIPK2-203ENST00000428878 ITGA6P23229 1130 aa13.28□□□□□ -0.28
HIPK2-203ENST00000428878 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
HIPK2-203ENST00000428878 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
HIPK2-203ENST00000428878 PI16Q6UXB8 463 aa13.27□□□□□ -0.28
HIPK2-203ENST00000428878 CHST3Q7LGC8 479 aa13.27□□□□□ -0.28
HIPK2-203ENST00000428878 APBA3O96018 575 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 NFKBIBQ15653 356 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 FAM227BQ96M60 508 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 LRP2BPQ9P2M1 347 aa13.27□□□□□ -0.29
HIPK2-203ENST00000428878 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
HIPK2-203ENST00000428878 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■□□□□ 9.4
HIPK2-203ENST00000428878 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
HIPK2-203ENST00000428878 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 FMN2Q9NZ56 1722 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 DEKP35659 375 aaKnown RBP13.26□□□□□ -0.29
HIPK2-203ENST00000428878 GREM2Q9H772 168 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
HIPK2-203ENST00000428878 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
HIPK2-203ENST00000428878 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
HIPK2-203ENST00000428878 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
HIPK2-203ENST00000428878 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■□□□ 12.9
HIPK2-203ENST00000428878 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
HIPK2-203ENST00000428878 HOXB7P09629 217 aa13.25□□□□□ -0.29
HIPK2-203ENST00000428878 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
HIPK2-203ENST00000428878 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
HIPK2-203ENST00000428878 TBC1D32Q96NH3 1257 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 UTP14AQ9BVJ6 771 aaKnown RBP13.24□□□□□ -0.29
HIPK2-203ENST00000428878 ADCY9O60503 1353 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
HIPK2-203ENST00000428878 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
HIPK2-203ENST00000428878 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
HIPK2-203ENST00000428878 CEBPZQ03701 1054 aaKnown RBP13.23□□□□□ -0.29
HIPK2-203ENST00000428878 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
HIPK2-203ENST00000428878 ADORA1P30542 326 aa13.23□□□□□ -0.29
HIPK2-203ENST00000428878 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
HIPK2-203ENST00000428878 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
HIPK2-203ENST00000428878 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
HIPK2-203ENST00000428878 PDIA6Q15084 440 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
HIPK2-203ENST00000428878 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
HIPK2-203ENST00000428878 GPR101Q96P66 508 aaPredicted RBP13.22□□□□□ -0.29
HIPK2-203ENST00000428878 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.29
HIPK2-203ENST00000428878 GNL2Q13823 731 aaKnown RBP13.21□□□□□ -0.29
HIPK2-203ENST00000428878 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
HIPK2-203ENST00000428878 SH3TC1Q8TE82 1336 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms