RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 UTP14AQ9BVJ6 771 aaKnown RBP13.87□□□□□ -0.19
ATG4B-210ENST00000428861 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
ATG4B-210ENST00000428861 SLX4Q8IY92 1834 aa13.86□□□□□ -0.19
ATG4B-210ENST00000428861 C21orf2O43822 256 aa13.86□□□□□ -0.19
ATG4B-210ENST00000428861 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
ATG4B-210ENST00000428861 HSP90AB3PQ58FF7 597 aa13.86□□□□□ -0.19
ATG4B-210ENST00000428861 PRPF40BQ6NWY9 871 aaKnown RBP13.86□□□□□ -0.19
ATG4B-210ENST00000428861 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
ATG4B-210ENST00000428861 NFKBIEO00221 500 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 NPR1P16066 1061 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 C7orf43Q8WVR3 580 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 CNKSR1Q969H4 720 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 ANKRD36CQ5JPF3 1778 aa13.85□□□□□ -0.19
ATG4B-210ENST00000428861 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
ATG4B-210ENST00000428861 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-210ENST00000428861 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
ATG4B-210ENST00000428861 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
ATG4B-210ENST00000428861 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.19
ATG4B-210ENST00000428861 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
ATG4B-210ENST00000428861 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
ATG4B-210ENST00000428861 MYD88Q99836 296 aa13.83□□□□□ -0.2
ATG4B-210ENST00000428861 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
ATG4B-210ENST00000428861 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.2
ATG4B-210ENST00000428861 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
ATG4B-210ENST00000428861 HOXA10P31260 410 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-210ENST00000428861 TRIM28Q13263 835 aaKnown RBP13.82□□□□□ -0.2
ATG4B-210ENST00000428861 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
ATG4B-210ENST00000428861 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
ATG4B-210ENST00000428861 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
ATG4B-210ENST00000428861 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
ATG4B-210ENST00000428861 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 IGKV5-2P06315 115 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 SLFN5Q08AF3 891 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-210ENST00000428861 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-210ENST00000428861 JARID2Q92833 1246 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-210ENST00000428861 METTL22Q9BUU2 404 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-210ENST00000428861 RNF181Q9P0P0 153 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
ATG4B-210ENST00000428861 SBF1O95248 1867 aa13.8□□□□□ -0.2
ATG4B-210ENST00000428861 FLIIQ13045 1269 aa13.8□□□□□ -0.2
ATG4B-210ENST00000428861 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
ATG4B-210ENST00000428861 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
ATG4B-210ENST00000428861 SNED1Q8TER0 1413 aa13.8□□□□□ -0.2
ATG4B-210ENST00000428861 FER1L6Q2WGJ9 1857 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 E9PSI1 815 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
ATG4B-210ENST00000428861 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 ABCC4O15439 1325 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 COL4A1P02462 1669 aa13.79□□□□□ -0.2
ATG4B-210ENST00000428861 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
ATG4B-210ENST00000428861 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
ATG4B-210ENST00000428861 LMNB1P20700 586 aa13.78□□□□□ -0.2
ATG4B-210ENST00000428861 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
ATG4B-210ENST00000428861 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
ATG4B-210ENST00000428861 RBM17Q96I25 401 aaKnown RBP13.78□□□□□ -0.2
ATG4B-210ENST00000428861 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
ATG4B-210ENST00000428861 LAMB2P55268 1798 aa13.78□□□□□ -0.2
ATG4B-210ENST00000428861 IRS4O14654 1257 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-210ENST00000428861 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
ATG4B-210ENST00000428861 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-210ENST00000428861 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.21
ATG4B-210ENST00000428861 TAOK3Q9H2K8 898 aa13.77□□□□□ -0.21
ATG4B-210ENST00000428861 LTBP3Q9NS15 1303 aa13.77□□□□□ -0.21
ATG4B-210ENST00000428861 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-210ENST00000428861 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
ATG4B-210ENST00000428861 F6X3S4 739 aa13.76□□□□□ -0.21
ATG4B-210ENST00000428861 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-210ENST00000428861 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-210ENST00000428861 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-210ENST00000428861 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
ATG4B-210ENST00000428861 SOGA3Q5TF21 947 aa13.75□□□□□ -0.21
ATG4B-210ENST00000428861 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
ATG4B-210ENST00000428861 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-210ENST00000428861 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-210ENST00000428861 TAF1P21675 1872 aa13.74□□□□□ -0.21
ATG4B-210ENST00000428861 CCDC88AQ3V6T2 1871 aa13.74□□□□□ -0.21
ATG4B-210ENST00000428861 KIF3CO14782 793 aa13.74□□□□□ -0.21
ATG4B-210ENST00000428861 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATG4B-210ENST00000428861 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
ATG4B-210ENST00000428861 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
ATG4B-210ENST00000428861 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
ATG4B-210ENST00000428861 NMRK2Q9NPI5 230 aa13.74□□□□□ -0.21
ATG4B-210ENST00000428861 CASP7P55210 303 aa13.73□□□□□ -0.21
ATG4B-210ENST00000428861 GRAPQ13588 217 aa13.73□□□□□ -0.21
ATG4B-210ENST00000428861 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
ATG4B-210ENST00000428861 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
ATG4B-210ENST00000428861 GRAPLQ8TC17 118 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-210ENST00000428861 CCDC85AQ96PX6 553 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-210ENST00000428861 SEC31BQ9NQW1 1179 aa13.73□□□□□ -0.21
ATG4B-210ENST00000428861 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
ATG4B-210ENST00000428861 COL4A5P29400 1685 aa13.72□□□□□ -0.21
ATG4B-210ENST00000428861 H7C1W4 665 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms