RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 NBPF7P0C2Y1 421 aaPredicted RBP22.38■■□□□ 1.17
AC055811.2-201ENST00000427497 ATP8B2P98198 1209 aa22.38■■□□□ 1.17
AC055811.2-201ENST00000427497 CD2APQ9Y5K6 639 aa22.38■■□□□ 1.17
AC055811.2-201ENST00000427497 UTYO14607 1347 aa22.38■■□□□ 1.17
AC055811.2-201ENST00000427497 CWF19L2Q2TBE0 894 aaKnown RBP22.37■■□□□ 1.17
AC055811.2-201ENST00000427497 TRAPPC3LQ5T215 181 aa22.37■■□□□ 1.17
AC055811.2-201ENST00000427497 BACH2Q9BYV9 841 aa22.37■■□□□ 1.17
AC055811.2-201ENST00000427497 STARD3NLO95772 234 aa22.36■■□□□ 1.17
AC055811.2-201ENST00000427497 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
AC055811.2-201ENST00000427497 ADRA2BP18089 450 aa22.36■■□□□ 1.17
AC055811.2-201ENST00000427497 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
AC055811.2-201ENST00000427497 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
AC055811.2-201ENST00000427497 RPS6KA4O75676 772 aa22.35■■□□□ 1.17
AC055811.2-201ENST00000427497 C4AP0C0L4 1744 aa22.35■■□□□ 1.17
AC055811.2-201ENST00000427497 PNMA6EA0A0J9YXQ4 647 aa22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 TTLL7Q6ZT98 887 aa22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 ARHGEF1Q92888 912 aaKnown RBP22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 MYD88Q99836 296 aa22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 LNPKQ9C0E8 428 aa22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
AC055811.2-201ENST00000427497 GRM8O00222 908 aa22.33■■□□□ 1.17
AC055811.2-201ENST00000427497 CRKLP46109 303 aaKnown RBP22.33■■□□□ 1.17
AC055811.2-201ENST00000427497 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.17
AC055811.2-201ENST00000427497 HDAC5Q9UQL6 1122 aa22.33■■□□□ 1.17
AC055811.2-201ENST00000427497 FAM161AQ3B820 660 aa22.33■■□□□ 1.16
AC055811.2-201ENST00000427497 SSH3Q8TE77 659 aa22.33■■□□□ 1.16
AC055811.2-201ENST00000427497 GCKRQ14397 625 aa22.32■■□□□ 1.16
AC055811.2-201ENST00000427497 YBX3P16989 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
AC055811.2-201ENST00000427497 MTX1Q13505 466 aa22.31■■□□□ 1.16
AC055811.2-201ENST00000427497 POLA2Q14181 598 aa22.31■■□□□ 1.16
AC055811.2-201ENST00000427497 C8orf34Q49A92 452 aa22.31■■□□□ 1.16
AC055811.2-201ENST00000427497 MMP10P09238 476 aa22.3■■□□□ 1.16
AC055811.2-201ENST00000427497 RFC4P35249 363 aa22.3■■□□□ 1.16
AC055811.2-201ENST00000427497 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
AC055811.2-201ENST00000427497 GYS1P13807 737 aa22.29■■□□□ 1.16
AC055811.2-201ENST00000427497 PPP1R42Q7Z4L9 355 aa22.29■■□□□ 1.16
AC055811.2-201ENST00000427497 GRIN3BO60391 1043 aa22.28■■□□□ 1.16
AC055811.2-201ENST00000427497 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
AC055811.2-201ENST00000427497 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
AC055811.2-201ENST00000427497 KIF13BQ9NQT8 1826 aa22.28■■□□□ 1.16
AC055811.2-201ENST00000427497 KAZALD1Q96I82 304 aa22.27■■□□□ 1.16
AC055811.2-201ENST00000427497 COL15A1P39059 1388 aa22.27■■□□□ 1.16
AC055811.2-201ENST00000427497 SUCLG2Q96I99 432 aa22.26■■□□□ 1.15
AC055811.2-201ENST00000427497 ZBTB1Q9Y2K1 713 aa22.26■■□□□ 1.15
AC055811.2-201ENST00000427497 ZBTB3Q9H5J0 574 aa22.26■■□□□ 1.15
AC055811.2-201ENST00000427497 CCDC87Q9NVE4 849 aa22.26■■□□□ 1.15
AC055811.2-201ENST00000427497 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
AC055811.2-201ENST00000427497 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
AC055811.2-201ENST00000427497 EXOC6BQ9Y2D4 811 aa22.25■■□□□ 1.15
AC055811.2-201ENST00000427497 IL6STP40189 918 aaPredicted RBP22.24■■□□□ 1.15
AC055811.2-201ENST00000427497 USP42Q9H9J4 1324 aaKnown RBP22.24■■□□□ 1.15
AC055811.2-201ENST00000427497 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 SRP68Q9UHB9 627 aaKnown RBP22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 MAP3K15Q6ZN16 1313 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 CASP7P55210 303 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 ISCA1Q9BUE6 129 aa22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 BICC1Q9H694 974 aaKnown RBP22.23■■□□□ 1.15
AC055811.2-201ENST00000427497 TRIM28Q13263 835 aaKnown RBP22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 TCIRG1Q13488 830 aa22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
AC055811.2-201ENST00000427497 A0A087WZG4 1122 aa22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 H7C1W4 665 aa22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 LRRCC1Q9C099 1032 aa22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 NOP58Q9Y2X3 529 aaKnown RBP22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 PARP3Q9Y6F1 533 aa22.21■■□□□ 1.15
AC055811.2-201ENST00000427497 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.15
AC055811.2-201ENST00000427497 RAB11FIP3O75154 756 aa22.2■■□□□ 1.15
AC055811.2-201ENST00000427497 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.15
AC055811.2-201ENST00000427497 APBB1O00213 710 aa22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 BMP2KLQ5H9B9 411 aa22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 GIGYF2Q6Y7W6 1299 aaKnown RBP22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 UBE3BQ7Z3V4 1068 aa22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 C16orf71Q8IYS4 520 aaPredicted RBP22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
AC055811.2-201ENST00000427497 SURF6O75683 361 aaKnown RBP22.19■■□□□ 1.14
AC055811.2-201ENST00000427497 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
AC055811.2-201ENST00000427497 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
AC055811.2-201ENST00000427497 TGFB2P61812 414 aa22.18■■□□□ 1.14
AC055811.2-201ENST00000427497 RABL6Q3YEC7 729 aaPredicted RBP22.18■■□□□ 1.14
AC055811.2-201ENST00000427497 NUP98P52948 1817 aa22.18■■□□□ 1.14
AC055811.2-201ENST00000427497 ZPR1O75312 459 aa22.17■■□□□ 1.14
AC055811.2-201ENST00000427497 HSP90AB4PQ58FF6 505 aa22.17■■□□□ 1.14
AC055811.2-201ENST00000427497 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
AC055811.2-201ENST00000427497 SALL3Q9BXA9 1300 aa22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 DDR1Q08345 913 aa22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 HLFQ16534 295 aa22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 HSP90AB3PQ58FF7 597 aa22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 DZIP3Q86Y13 1208 aaKnown RBP22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 JARID2Q92833 1246 aaPredicted RBP22.16■■□□□ 1.14
AC055811.2-201ENST00000427497 OSBPL3Q9H4L5 887 aa22.15■■□□□ 1.14
AC055811.2-201ENST00000427497 BRCA1P38398 1863 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms