RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 PARP10Q53GL7 1025 aa27.5■■□□□ 1.99
PCGF3-204ENST00000427463 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
PCGF3-204ENST00000427463 HOXA10P31260 410 aaPredicted RBP27.49■■□□□ 1.99
PCGF3-204ENST00000427463 RPGRQ92834 1020 aaKnown RBP27.49■■□□□ 1.99
PCGF3-204ENST00000427463 PPP1R42Q7Z4L9 355 aa27.48■■□□□ 1.99
PCGF3-204ENST00000427463 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
PCGF3-204ENST00000427463 C3orf67Q6ZVT6 689 aa27.47■■□□□ 1.99
PCGF3-204ENST00000427463 COPS6Q7L5N1 327 aa27.47■■□□□ 1.99
PCGF3-204ENST00000427463 PCNTO95613 3336 aa27.47■■□□□ 1.99
PCGF3-204ENST00000427463 XAGE3Q8WTP9 111 aa27.46■■□□□ 1.99
PCGF3-204ENST00000427463 DDX21Q9NR30 783 aaKnown RBP eCLIP27.46■■□□□ 1.99
PCGF3-204ENST00000427463 ZNF541Q9H0D2 1346 aa27.45■■□□□ 1.99
PCGF3-204ENST00000427463 AIMP1Q12904 312 aaKnown RBP27.45■■□□□ 1.98
PCGF3-204ENST00000427463 KLRG1Q96E93 195 aa27.45■■□□□ 1.98
PCGF3-204ENST00000427463 L3MBTL3Q96JM7 780 aaPredicted RBP27.45■■□□□ 1.98
PCGF3-204ENST00000427463 PSMD1Q99460 953 aa27.45■■□□□ 1.98
PCGF3-204ENST00000427463 UTP14AQ9BVJ6 771 aaKnown RBP27.45■■□□□ 1.98
PCGF3-204ENST00000427463 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
PCGF3-204ENST00000427463 SYNE4Q8N205 404 aa27.44■■□□□ 1.98
PCGF3-204ENST00000427463 CRAMP1Q96RY5 1269 aa27.44■■□□□ 1.98
PCGF3-204ENST00000427463 COL4A5P29400 1685 aa27.43■■□□□ 1.98
PCGF3-204ENST00000427463 HOXB7P09629 217 aa27.43■■□□□ 1.98
PCGF3-204ENST00000427463 CC2D2BQ6DHV5 1058 aa27.43■■□□□ 1.98
PCGF3-204ENST00000427463 RBM17Q96I25 401 aaKnown RBP27.43■■□□□ 1.98
PCGF3-204ENST00000427463 CHPF2Q9P2E5 772 aa27.43■■□□□ 1.98
PCGF3-204ENST00000427463 RNF123Q5XPI4 1314 aa27.42■■□□□ 1.98
PCGF3-204ENST00000427463 HSP90AB3PQ58FF7 597 aa27.42■■□□□ 1.98
PCGF3-204ENST00000427463 SLC10A5Q5PT55 438 aa27.42■■□□□ 1.98
PCGF3-204ENST00000427463 SLC51AQ86UW1 340 aa27.42■■□□□ 1.98
PCGF3-204ENST00000427463 CFAP44Q96MT7 982 aa27.42■■□□□ 1.98
PCGF3-204ENST00000427463 IQCA1LA6NCM1 817 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 POTEIP0CG38 1075 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 HDGFL1Q5TGJ6 251 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 NLRP10Q86W26 655 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 NLRP3Q96P20 1036 aa27.41■■□□□ 1.98
PCGF3-204ENST00000427463 TAF1P21675 1872 aa27.4■■□□□ 1.98
PCGF3-204ENST00000427463 FZD9O00144 591 aa27.4■■□□□ 1.98
PCGF3-204ENST00000427463 PPEF1O14829 653 aaPredicted RBP27.4■■□□□ 1.98
PCGF3-204ENST00000427463 DDX60Q8IY21 1712 aaKnown RBP27.4■■□□□ 1.98
PCGF3-204ENST00000427463 TCIRG1Q13488 830 aa27.39■■□□□ 1.98
PCGF3-204ENST00000427463 CHADLQ6NUI6 762 aa27.39■■□□□ 1.98
PCGF3-204ENST00000427463 JMYQ8N9B5 988 aa27.39■■□□□ 1.98
PCGF3-204ENST00000427463 MBIPQ9NS73 344 aa27.39■■□□□ 1.98
PCGF3-204ENST00000427463 ADAMTSL1Q8N6G6 1762 aa27.39■■□□□ 1.98
PCGF3-204ENST00000427463 APAF1O14727 1248 aa27.38■■□□□ 1.97
PCGF3-204ENST00000427463 GRIPAP1Q4V328 841 aa27.38■■□□□ 1.97
PCGF3-204ENST00000427463 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
PCGF3-204ENST00000427463 ZNF853P0CG23 659 aa27.37■■□□□ 1.97
PCGF3-204ENST00000427463 DUSP27Q5VZP5 1158 aa27.37■■□□□ 1.97
PCGF3-204ENST00000427463 DBF4Q9UBU7 674 aaPredicted RBP27.37■■□□□ 1.97
PCGF3-204ENST00000427463 ABCC4O15439 1325 aa27.37■■□□□ 1.97
PCGF3-204ENST00000427463 TCERG1O14776 1098 aaKnown RBP27.35■■□□□ 1.97
PCGF3-204ENST00000427463 PLBD2Q8NHP8 589 aa27.35■■□□□ 1.97
PCGF3-204ENST00000427463 JDP2Q8WYK2 163 aa27.35■■□□□ 1.97
PCGF3-204ENST00000427463 HCLS1P14317 486 aaPredicted RBP27.34■■□□□ 1.97
PCGF3-204ENST00000427463 LDHDQ86WU2 507 aa27.34■■□□□ 1.97
PCGF3-204ENST00000427463 IFT57Q9NWB7 429 aa27.34■■□□□ 1.97
PCGF3-204ENST00000427463 TRMT112Q9UI30 125 aaKnown RBP27.34■■□□□ 1.97
PCGF3-204ENST00000427463 SH3TC1Q8TE82 1336 aa27.34■■□□□ 1.97
PCGF3-204ENST00000427463 GPC2Q8N158 579 aa27.33■■□□□ 1.97
PCGF3-204ENST00000427463 HACL1Q9UJ83 578 aa27.33■■□□□ 1.97
PCGF3-204ENST00000427463 ATP6V0A2Q9Y487 856 aa27.33■■□□□ 1.97
PCGF3-204ENST00000427463 LTBP1Q14766 1721 aa27.33■■□□□ 1.96
PCGF3-204ENST00000427463 IFFO2Q5TF58 517 aa27.32■■□□□ 1.96
PCGF3-204ENST00000427463 ANKRD13DQ6ZTN6 518 aa27.32■■□□□ 1.96
PCGF3-204ENST00000427463 HYPKQ9NX55 129 aa27.32■■□□□ 1.96
PCGF3-204ENST00000427463 LRRC37AA6NMS7 1700 aa27.32■■□□□ 1.96
PCGF3-204ENST00000427463 LARGE2Q8N3Y3 721 aa27.31■■□□□ 1.96
PCGF3-204ENST00000427463 EPHX2P34913 555 aa27.3■■□□□ 1.96
PCGF3-204ENST00000427463 GNAI1P63096 354 aa27.3■■□□□ 1.96
PCGF3-204ENST00000427463 CALD1Q05682 793 aaKnown RBP27.3■■□□□ 1.96
PCGF3-204ENST00000427463 ZNF428Q96B54 188 aa27.3■■□□□ 1.96
PCGF3-204ENST00000427463 ISCA1Q9BUE6 129 aa27.3■■□□□ 1.96
PCGF3-204ENST00000427463 EIF6P56537 245 aaKnown RBP27.29■■□□□ 1.96
PCGF3-204ENST00000427463 EAPPQ56P03 285 aaPredicted RBP27.29■■□□□ 1.96
PCGF3-204ENST00000427463 PASKQ96RG2 1323 aa27.28■■□□□ 1.96
PCGF3-204ENST00000427463 TMX4Q9H1E5 349 aaPredicted RBP27.28■■□□□ 1.96
PCGF3-204ENST00000427463 BBOX1O75936 387 aa27.27■■□□□ 1.96
PCGF3-204ENST00000427463 CCDC184Q52MB2 194 aa27.27■■□□□ 1.96
PCGF3-204ENST00000427463 CREBZFQ9NS37 354 aa27.27■■□□□ 1.96
PCGF3-204ENST00000427463 ATP5J2-PTCD1G3V325 749 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 PPIP5K2O43314 1243 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 GRAPQ13588 217 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 AOC3Q16853 763 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 DDX46Q7L014 1031 aaKnown RBP27.26■■□□□ 1.95
PCGF3-204ENST00000427463 NIM1KQ8IY84 436 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 GRAPLQ8TC17 118 aaPredicted RBP27.26■■□□□ 1.95
PCGF3-204ENST00000427463 RTFDC1Q9BY42 306 aaPredicted RBP27.26■■□□□ 1.95
PCGF3-204ENST00000427463 GJA3Q9Y6H8 435 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.95
PCGF3-204ENST00000427463 ELL2O00472 640 aaPredicted RBP27.25■■□□□ 1.95
PCGF3-204ENST00000427463 PNMA8AQ86V59 439 aaPredicted RBP27.25■■□□□ 1.95
PCGF3-204ENST00000427463 SP8Q8IXZ3 490 aa27.25■■□□□ 1.95
PCGF3-204ENST00000427463 FAM89AQ96GI7 184 aa27.25■■□□□ 1.95
PCGF3-204ENST00000427463 COL4A1P02462 1669 aa27.24■■□□□ 1.95
PCGF3-204ENST00000427463 ITGBL1O95965 494 aaPredicted RBP27.24■■□□□ 1.95
PCGF3-204ENST00000427463 VPS33BQ9H267 617 aa27.24■■□□□ 1.95
PCGF3-204ENST00000427463 SCNN1DP51172 638 aa27.23■■□□□ 1.95
PCGF3-204ENST00000427463 TRIM28Q13263 835 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms