RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 YBX3P16989 372 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■■□ 25.7
SMIM12-203ENST00000426886 KCNA3P22001 575 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
SMIM12-203ENST00000426886 ADCY9O60503 1353 aa16■□□□□ 0.15
SMIM12-203ENST00000426886 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
SMIM12-203ENST00000426886 CWF19L2Q2TBE0 894 aaKnown RBP15.99■□□□□ 0.15
SMIM12-203ENST00000426886 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
SMIM12-203ENST00000426886 ISCA1Q9BUE6 129 aa15.99■□□□□ 0.15
SMIM12-203ENST00000426886 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
SMIM12-203ENST00000426886 PDE6BP35913 854 aa15.99■□□□□ 0.15
SMIM12-203ENST00000426886 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
SMIM12-203ENST00000426886 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
SMIM12-203ENST00000426886 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
SMIM12-203ENST00000426886 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
SMIM12-203ENST00000426886 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
SMIM12-203ENST00000426886 ABCC12Q96J65 1359 aa15.98■□□□□ 0.15
SMIM12-203ENST00000426886 DNAAF4Q8WXU2 420 aa15.98■□□□□ 0.15
SMIM12-203ENST00000426886 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
SMIM12-203ENST00000426886 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
SMIM12-203ENST00000426886 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
SMIM12-203ENST00000426886 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
SMIM12-203ENST00000426886 N4BP2Q86UW6 1770 aaPredicted RBP15.96■□□□□ 0.15
SMIM12-203ENST00000426886 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.14
SMIM12-203ENST00000426886 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.14
SMIM12-203ENST00000426886 BCAR3O75815 825 aa15.95■□□□□ 0.14
SMIM12-203ENST00000426886 SRGNP10124 158 aa15.95■□□□□ 0.14
SMIM12-203ENST00000426886 TRIM28Q13263 835 aaKnown RBP15.95■□□□□ 0.14
SMIM12-203ENST00000426886 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
SMIM12-203ENST00000426886 NOB1Q9ULX3 412 aaKnown RBP15.95■□□□□ 0.14
SMIM12-203ENST00000426886 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
SMIM12-203ENST00000426886 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
SMIM12-203ENST00000426886 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
SMIM12-203ENST00000426886 NEURL1BA8MQ27 555 aa15.94■□□□□ 0.14
SMIM12-203ENST00000426886 TTLL6Q8N841 843 aa15.94■□□□□ 0.14
SMIM12-203ENST00000426886 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
SMIM12-203ENST00000426886 FRAT1Q92837 279 aaPredicted RBP15.94■□□□□ 0.14
SMIM12-203ENST00000426886 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
SMIM12-203ENST00000426886 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
SMIM12-203ENST00000426886 IRS4O14654 1257 aaPredicted RBP15.93■□□□□ 0.14
SMIM12-203ENST00000426886 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
SMIM12-203ENST00000426886 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
SMIM12-203ENST00000426886 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
SMIM12-203ENST00000426886 ARFGEF2Q9Y6D5 1785 aa15.92■□□□□ 0.14
SMIM12-203ENST00000426886 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
SMIM12-203ENST00000426886 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
SMIM12-203ENST00000426886 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
SMIM12-203ENST00000426886 LINS1Q8NG48 757 aa15.92■□□□□ 0.14
SMIM12-203ENST00000426886 C21orf2O43822 256 aa15.91■□□□□ 0.14
SMIM12-203ENST00000426886 NPR1P16066 1061 aa15.91■□□□□ 0.14
SMIM12-203ENST00000426886 GCKRQ14397 625 aa15.91■□□□□ 0.14
SMIM12-203ENST00000426886 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
SMIM12-203ENST00000426886 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
SMIM12-203ENST00000426886 KLRG2A4D1S0 409 aaPredicted RBP15.91■□□□□ 0.14
SMIM12-203ENST00000426886 ANKRD31Q8N7Z5 1873 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
SMIM12-203ENST00000426886 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 PCCAP05165 728 aaPredicted RBP15.9■□□□□ 0.14
SMIM12-203ENST00000426886 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
SMIM12-203ENST00000426886 OLFM4Q6UX06 510 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 PTPRCP08575 1304 aa15.9■□□□□ 0.14
SMIM12-203ENST00000426886 CRY2Q49AN0 593 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 STYK1Q6J9G0 422 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 SLC51AQ86UW1 340 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 SRCIN1Q9C0H9 1055 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
SMIM12-203ENST00000426886 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
SMIM12-203ENST00000426886 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
SMIM12-203ENST00000426886 TNNQ9UQP3 1299 aa15.88■□□□□ 0.13
SMIM12-203ENST00000426886 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
SMIM12-203ENST00000426886 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
SMIM12-203ENST00000426886 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
SMIM12-203ENST00000426886 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
SMIM12-203ENST00000426886 H7C1W4 665 aa15.87■□□□□ 0.13
SMIM12-203ENST00000426886 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
SMIM12-203ENST00000426886 CACNA1FO60840 1977 aa15.86■□□□□ 0.13
SMIM12-203ENST00000426886 PDE8AO60658 829 aa15.86■□□□□ 0.13
SMIM12-203ENST00000426886 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
SMIM12-203ENST00000426886 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
SMIM12-203ENST00000426886 KIF16BQ96L93 1317 aa15.85■□□□□ 0.13
SMIM12-203ENST00000426886 GRM8O00222 908 aa15.85■□□□□ 0.13
SMIM12-203ENST00000426886 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
SMIM12-203ENST00000426886 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
SMIM12-203ENST00000426886 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
SMIM12-203ENST00000426886 API5Q9BZZ5 524 aaKnown RBP15.85■□□□□ 0.13
SMIM12-203ENST00000426886 ABCC4O15439 1325 aa15.84■□□□□ 0.13
SMIM12-203ENST00000426886 RASSF7Q02833 373 aa15.84■□□□□ 0.13
SMIM12-203ENST00000426886 IPO8O15397 1037 aaKnown RBP15.84■□□□□ 0.13
SMIM12-203ENST00000426886 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
SMIM12-203ENST00000426886 TRIM27P14373 513 aa15.84■□□□□ 0.13
SMIM12-203ENST00000426886 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
SMIM12-203ENST00000426886 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.13
SMIM12-203ENST00000426886 CASP7P55210 303 aa15.83■□□□□ 0.13
SMIM12-203ENST00000426886 SF3B3Q15393 1217 aaKnown RBP15.83■□□□□ 0.13
SMIM12-203ENST00000426886 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.13
SMIM12-203ENST00000426886 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.13
SMIM12-203ENST00000426886 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.13
SMIM12-203ENST00000426886 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms