RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 NEURL1BA8MQ27 555 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 ATP5J2-PTCD1G3V325 749 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 GTF2E1P29083 439 aaPredicted RBP30.47■■■□□ 2.47
APOE-202ENST00000425718 ST5P78524 1137 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 BEND3Q5T5X7 828 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 CNBD1Q8NA66 436 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 UBN2Q6ZU65 1347 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 DDR1Q08345 913 aa30.46■■■□□ 2.47
APOE-202ENST00000425718 DZIP1LQ8IYY4 767 aaKnown RBP30.46■■■□□ 2.47
APOE-202ENST00000425718 SGIP1Q9BQI5 828 aa30.46■■■□□ 2.47
APOE-202ENST00000425718 IGKV5-2P06315 115 aa30.44■■■□□ 2.46
APOE-202ENST00000425718 PTGER2P43116 358 aa30.44■■■□□ 2.46
APOE-202ENST00000425718 TRMT112Q9UI30 125 aaKnown RBP30.44■■■□□ 2.46
APOE-202ENST00000425718 KIF13BQ9NQT8 1826 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 PDE3AQ14432 1141 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 SUSD4Q5VX71 490 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 INTS3Q68E01 1043 aaKnown RBP30.43■■■□□ 2.46
APOE-202ENST00000425718 ZBTB38Q8NAP3 1195 aaPredicted RBP30.43■■■□□ 2.46
APOE-202ENST00000425718 PDZRN3Q9UPQ7 1066 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 HDAC5Q9UQL6 1122 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 SH3TC1Q8TE82 1336 aa30.43■■■□□ 2.46
APOE-202ENST00000425718 NTSR2O95665 410 aa30.42■■■□□ 2.46
APOE-202ENST00000425718 PCCAP05165 728 aaPredicted RBP30.42■■■□□ 2.46
APOE-202ENST00000425718 GCKRQ14397 625 aa30.42■■■□□ 2.46
APOE-202ENST00000425718 MYH3P11055 1940 aa30.41■■■□□ 2.46
APOE-202ENST00000425718 LAMB2P55268 1798 aa30.41■■■□□ 2.46
APOE-202ENST00000425718 RIC1Q4ADV7 1423 aa30.41■■■□□ 2.46
APOE-202ENST00000425718 CWF19L2Q2TBE0 894 aaKnown RBP30.41■■■□□ 2.46
APOE-202ENST00000425718 RRP1P56182 461 aaKnown RBP30.4■■■□□ 2.46
APOE-202ENST00000425718 CHMP4BQ9H444 224 aaKnown RBP30.4■■■□□ 2.46
APOE-202ENST00000425718 C9orf78Q9NZ63 289 aaPredicted RBP30.4■■■□□ 2.46
APOE-202ENST00000425718 PPP1R1BQ9UD71 204 aaPredicted RBP30.4■■■□□ 2.46
APOE-202ENST00000425718 PRR5LQ6MZQ0 368 aa30.39■■■□□ 2.46
APOE-202ENST00000425718 FAM177BA6PVY3 158 aa30.38■■■□□ 2.45
APOE-202ENST00000425718 CLUAP1Q96AJ1 413 aa30.38■■■□□ 2.45
APOE-202ENST00000425718 CDHR2Q9BYE9 1310 aa30.38■■■□□ 2.45
APOE-202ENST00000425718 C10orf71Q711Q0 1435 aa30.38■■■□□ 2.45
APOE-202ENST00000425718 GRM8O00222 908 aa30.37■■■□□ 2.45
APOE-202ENST00000425718 PDE6BP35913 854 aa30.36■■■□□ 2.45
APOE-202ENST00000425718 SLC10A5Q5PT55 438 aa30.36■■■□□ 2.45
APOE-202ENST00000425718 BRIP1Q9BX63 1249 aa30.36■■■□□ 2.45
APOE-202ENST00000425718 CD2APQ9Y5K6 639 aa30.36■■■□□ 2.45
APOE-202ENST00000425718 H7C1W4 665 aa30.35■■■□□ 2.45
APOE-202ENST00000425718 ANKRD31Q8N7Z5 1873 aa30.34■■■□□ 2.45
APOE-202ENST00000425718 DDX60Q8IY21 1712 aaKnown RBP30.33■■■□□ 2.45
APOE-202ENST00000425718 UTYO14607 1347 aa30.33■■■□□ 2.45
APOE-202ENST00000425718 GNAI3P08754 354 aa30.33■■■□□ 2.45
APOE-202ENST00000425718 ERFEQ4G0M1 354 aa30.33■■■□□ 2.45
APOE-202ENST00000425718 TMEM57Q8N5G2 664 aa30.33■■■□□ 2.45
APOE-202ENST00000425718 IRS4O14654 1257 aaPredicted RBP30.32■■■□□ 2.44
APOE-202ENST00000425718 PLIN1O60240 522 aa30.32■■■□□ 2.44
APOE-202ENST00000425718 NUTM1Q86Y26 1132 aa30.32■■■□□ 2.44
APOE-202ENST00000425718 ITPRIPQ8IWB1 547 aa30.32■■■□□ 2.44
APOE-202ENST00000425718 FAM89AQ96GI7 184 aa30.32■■■□□ 2.44
APOE-202ENST00000425718 NLRP3Q96P20 1036 aa30.32■■■□□ 2.44
APOE-202ENST00000425718 TGFB2P61812 414 aa30.31■■■□□ 2.44
APOE-202ENST00000425718 UBE3BQ7Z3V4 1068 aa30.31■■■□□ 2.44
APOE-202ENST00000425718 DDX19BQ9UMR2 479 aa30.31■■■□□ 2.44
APOE-202ENST00000425718 PDE8AO60658 829 aa30.3■■■□□ 2.44
APOE-202ENST00000425718 MVPQ14764 893 aaKnown RBP30.29■■■□□ 2.44
APOE-202ENST00000425718 PLA2G12BQ9BX93 195 aa30.29■■■□□ 2.44
APOE-202ENST00000425718 SUPT16HQ9Y5B9 1047 aaKnown RBP30.29■■■□□ 2.44
APOE-202ENST00000425718 UBTFL1P0CB47 393 aaPredicted RBP30.28■■■□□ 2.44
APOE-202ENST00000425718 PANK1Q8TE04 598 aa30.28■■■□□ 2.44
APOE-202ENST00000425718 USP44Q9H0E7 712 aa30.28■■■□□ 2.44
APOE-202ENST00000425718 TNNQ9UQP3 1299 aa30.28■■■□□ 2.44
APOE-202ENST00000425718 ABCC12Q96J65 1359 aa30.28■■■□□ 2.44
APOE-202ENST00000425718 RLBP1P12271 317 aa30.27■■■□□ 2.44
APOE-202ENST00000425718 DLEC1Q9Y238 1755 aa30.27■■■□□ 2.44
APOE-202ENST00000425718 KLRG2A4D1S0 409 aaPredicted RBP30.26■■■□□ 2.43
APOE-202ENST00000425718 H0YIN7 160 aa30.26■■■□□ 2.43
APOE-202ENST00000425718 CASP7P55210 303 aa30.26■■■□□ 2.43
APOE-202ENST00000425718 RTL5Q5HYW3 569 aaPredicted RBP30.25■■■□□ 2.43
APOE-202ENST00000425718 KLHL34Q8N239 644 aa30.25■■■□□ 2.43
APOE-202ENST00000425718 HCLS1P14317 486 aaPredicted RBP30.24■■■□□ 2.43
APOE-202ENST00000425718 TNRC6CQ9HCJ0 1690 aaKnown RBP30.23■■■□□ 2.43
APOE-202ENST00000425718 SF3B3Q15393 1217 aaKnown RBP30.23■■■□□ 2.43
APOE-202ENST00000425718 CCDC152Q4G0S7 254 aa30.23■■■□□ 2.43
APOE-202ENST00000425718 NBPF7P0C2Y1 421 aaPredicted RBP30.22■■■□□ 2.43
APOE-202ENST00000425718 CRY2Q49AN0 593 aa30.22■■■□□ 2.43
APOE-202ENST00000425718 RPGRQ92834 1020 aaKnown RBP30.22■■■□□ 2.43
APOE-202ENST00000425718 COG6Q9Y2V7 657 aa30.22■■■□□ 2.43
APOE-202ENST00000425718 NPR1P16066 1061 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 CTSWP56202 376 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 C2CD5Q86YS7 1000 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 SYNE4Q8N205 404 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 CCDC24Q8N4L8 307 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 MASTLQ96GX5 879 aa30.21■■■□□ 2.43
APOE-202ENST00000425718 FHDC1Q9C0D6 1143 aaPredicted RBP30.21■■■□□ 2.43
APOE-202ENST00000425718 KIAA1551Q9HCM1 1747 aa30.2■■■□□ 2.43
APOE-202ENST00000425718 GNAI2P04899 355 aa30.2■■■□□ 2.43
APOE-202ENST00000425718 AAMPQ13685 434 aa30.2■■■□□ 2.43
APOE-202ENST00000425718 STYK1Q6J9G0 422 aa30.2■■■□□ 2.43
APOE-202ENST00000425718 RBM17Q96I25 401 aaKnown RBP30.2■■■□□ 2.43
APOE-202ENST00000425718 MEIS3Q99687 375 aa30.2■■■□□ 2.43
APOE-202ENST00000425718 COL11A2P13942 1736 aaPredicted RBP30.19■■■□□ 2.42
APOE-202ENST00000425718 ZBTB7BO15156 539 aaPredicted RBP30.19■■■□□ 2.42
APOE-202ENST00000425718 JARID2Q92833 1246 aaPredicted RBP30.19■■■□□ 2.42
APOE-202ENST00000425718 BRCA1P38398 1863 aaKnown RBP30.19■■■□□ 2.42
APOE-202ENST00000425718 RTL9Q8NET4 1388 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms