RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 GLTPD2A6NH11 291 aa27.98■■■□□ 2.07
CDCP1-202ENST00000425231 RRAGCQ9HB90 399 aa27.98■■■□□ 2.07
CDCP1-202ENST00000425231 CEP350Q5VT06 3117 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 ANKRD36CQ5JPF3 1778 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 TCIRG1Q13488 830 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 CCDC93Q567U6 631 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 HSP90AB3PQ58FF7 597 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 OLFM4Q6UX06 510 aa27.97■■■□□ 2.07
CDCP1-202ENST00000425231 UTP14AQ9BVJ6 771 aaKnown RBP27.97■■■□□ 2.07
CDCP1-202ENST00000425231 HOXA10P31260 410 aaPredicted RBP27.96■■■□□ 2.07
CDCP1-202ENST00000425231 SLC10A5Q5PT55 438 aa27.95■■■□□ 2.07
CDCP1-202ENST00000425231 C3orf67Q6ZVT6 689 aa27.95■■■□□ 2.07
CDCP1-202ENST00000425231 NLRP10Q86W26 655 aa27.95■■■□□ 2.07
CDCP1-202ENST00000425231 ELL2O00472 640 aaPredicted RBP27.94■■■□□ 2.06
CDCP1-202ENST00000425231 HSPA6P17066 643 aa27.94■■■□□ 2.06
CDCP1-202ENST00000425231 CCDC27Q2M243 656 aa27.94■■■□□ 2.06
CDCP1-202ENST00000425231 PLBD2Q8NHP8 589 aa27.94■■■□□ 2.06
CDCP1-202ENST00000425231 HYPKQ9NX55 129 aa27.94■■■□□ 2.06
CDCP1-202ENST00000425231 ANKRD13DQ6ZTN6 518 aa27.93■■■□□ 2.06
CDCP1-202ENST00000425231 C8orf58Q8NAV2 365 aa27.93■■■□□ 2.06
CDCP1-202ENST00000425231 RPGRQ92834 1020 aaKnown RBP27.93■■■□□ 2.06
CDCP1-202ENST00000425231 RNF123Q5XPI4 1314 aa27.92■■■□□ 2.06
CDCP1-202ENST00000425231 FKBP4Q02790 459 aaKnown RBP eCLIP27.92■■■□□ 2.06
CDCP1-202ENST00000425231 WWC1Q8IX03 1113 aa27.92■■■□□ 2.06
CDCP1-202ENST00000425231 RTKN2Q8IZC4 609 aa27.92■■■□□ 2.06
CDCP1-202ENST00000425231 NLRP3Q96P20 1036 aa27.92■■■□□ 2.06
CDCP1-202ENST00000425231 CRAMP1Q96RY5 1269 aa27.92■■■□□ 2.06
CDCP1-202ENST00000425231 SNED1Q8TER0 1413 aa27.91■■■□□ 2.06
CDCP1-202ENST00000425231 RBM46Q8TBY0 533 aaKnown RBP27.91■■■□□ 2.06
CDCP1-202ENST00000425231 NCBP3Q53F19 620 aaKnown RBP27.9■■■□□ 2.06
CDCP1-202ENST00000425231 DPY19L2Q6NUT2 758 aa27.9■■■□□ 2.06
CDCP1-202ENST00000425231 C16orf71Q8IYS4 520 aaPredicted RBP27.9■■■□□ 2.06
CDCP1-202ENST00000425231 SYNE4Q8N205 404 aa27.9■■■□□ 2.06
CDCP1-202ENST00000425231 RBM17Q96I25 401 aaKnown RBP27.89■■■□□ 2.06
CDCP1-202ENST00000425231 TRMT112Q9UI30 125 aaKnown RBP27.89■■■□□ 2.06
CDCP1-202ENST00000425231 POTECB2RU33 542 aa27.88■■■□□ 2.05
CDCP1-202ENST00000425231 VEGFAP15692 232 aaPredicted RBP27.88■■■□□ 2.05
CDCP1-202ENST00000425231 ISCA1Q9BUE6 129 aa27.88■■■□□ 2.05
CDCP1-202ENST00000425231 TSPYL6Q8N831 410 aa27.87■■■□□ 2.05
CDCP1-202ENST00000425231 TSR2Q969E8 191 aaKnown RBP27.87■■■□□ 2.05
CDCP1-202ENST00000425231 PHAXQ9H814 394 aaKnown RBP27.87■■■□□ 2.05
CDCP1-202ENST00000425231 ZNF277Q9NRM2 450 aaPredicted RBP27.87■■■□□ 2.05
CDCP1-202ENST00000425231 HCLS1P14317 486 aaPredicted RBP27.86■■■□□ 2.05
CDCP1-202ENST00000425231 CC2D2BQ6DHV5 1058 aa27.86■■■□□ 2.05
CDCP1-202ENST00000425231 SH3TC1Q8TE82 1336 aa27.86■■■□□ 2.05
CDCP1-202ENST00000425231 WDR90Q96KV7 1748 aa27.86■■■□□ 2.05
CDCP1-202ENST00000425231 ZNF428Q96B54 188 aa27.85■■■□□ 2.05
CDCP1-202ENST00000425231 LAMB2P55268 1798 aa27.85■■■□□ 2.05
CDCP1-202ENST00000425231 ATP5J2-PTCD1G3V325 749 aa27.84■■■□□ 2.05
CDCP1-202ENST00000425231 SLC51AQ86UW1 340 aa27.84■■■□□ 2.05
CDCP1-202ENST00000425231 PSMD1Q99460 953 aa27.84■■■□□ 2.05
CDCP1-202ENST00000425231 IL16Q14005 1332 aa27.83■■■□□ 2.05
CDCP1-202ENST00000425231 PPEF1O14829 653 aaPredicted RBP27.83■■■□□ 2.05
CDCP1-202ENST00000425231 DDNO94850 711 aaPredicted RBP27.83■■■□□ 2.05
CDCP1-202ENST00000425231 FSTL1Q12841 308 aa27.83■■■□□ 2.05
CDCP1-202ENST00000425231 TRIM28Q13263 835 aaKnown RBP27.83■■■□□ 2.05
CDCP1-202ENST00000425231 CCDC30Q5VVM6 783 aa27.83■■■□□ 2.05
CDCP1-202ENST00000425231 IARSP41252 1262 aaKnown RBP27.82■■■□□ 2.04
CDCP1-202ENST00000425231 RIC3Q7Z5B4 369 aa27.82■■■□□ 2.04
CDCP1-202ENST00000425231 CHMP4AQ9BY43 222 aa27.82■■■□□ 2.04
CDCP1-202ENST00000425231 ABCC4O15439 1325 aa27.81■■■□□ 2.04
CDCP1-202ENST00000425231 GRIPAP1Q4V328 841 aa27.81■■■□□ 2.04
CDCP1-202ENST00000425231 TCERG1O14776 1098 aaKnown RBP27.8■■■□□ 2.04
CDCP1-202ENST00000425231 GOLGA2Q08379 1002 aa27.8■■■□□ 2.04
CDCP1-202ENST00000425231 FAM89AQ96GI7 184 aa27.8■■■□□ 2.04
CDCP1-202ENST00000425231 ATP6V0A2Q9Y487 856 aa27.79■■■□□ 2.04
CDCP1-202ENST00000425231 DDX60Q8IY21 1712 aaKnown RBP27.79■■■□□ 2.04
CDCP1-202ENST00000425231 APLP1P51693 650 aa27.78■■■□□ 2.04
CDCP1-202ENST00000425231 SALL2Q9Y467 1007 aaPredicted RBP27.78■■■□□ 2.04
CDCP1-202ENST00000425231 FZD9O00144 591 aa27.77■■■□□ 2.04
CDCP1-202ENST00000425231 BBOX1O75936 387 aa27.77■■■□□ 2.04
CDCP1-202ENST00000425231 SMC1BQ8NDV3 1235 aa27.77■■■□□ 2.04
CDCP1-202ENST00000425231 ZNF541Q9H0D2 1346 aa27.77■■■□□ 2.04
CDCP1-202ENST00000425231 TWISTNBQ3B726 338 aaPredicted RBP27.76■■■□□ 2.04
CDCP1-202ENST00000425231 WDR63Q8IWG1 891 aa27.76■■■□□ 2.04
CDCP1-202ENST00000425231 DDX46Q7L014 1031 aaKnown RBP27.75■■■□□ 2.03
CDCP1-202ENST00000425231 FAM9BQ8IZU0 186 aa27.75■■■□□ 2.03
CDCP1-202ENST00000425231 COL4A5P29400 1685 aa27.75■■■□□ 2.03
CDCP1-202ENST00000425231 SF3B3Q15393 1217 aaKnown RBP27.75■■■□□ 2.03
CDCP1-202ENST00000425231 RTL5Q5HYW3 569 aaPredicted RBP27.75■■■□□ 2.03
CDCP1-202ENST00000425231 L3MBTL3Q96JM7 780 aaPredicted RBP27.75■■■□□ 2.03
CDCP1-202ENST00000425231 MYD88Q99836 296 aa27.75■■■□□ 2.03
CDCP1-202ENST00000425231 TAF1P21675 1872 aa27.74■■■□□ 2.03
CDCP1-202ENST00000425231 GRAPQ13588 217 aa27.74■■■□□ 2.03
CDCP1-202ENST00000425231 SP8Q8IXZ3 490 aa27.74■■■□□ 2.03
CDCP1-202ENST00000425231 GRAPLQ8TC17 118 aaPredicted RBP27.74■■■□□ 2.03
CDCP1-202ENST00000425231 FANCIQ9NVI1 1328 aa27.73■■■□□ 2.03
CDCP1-202ENST00000425231 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
CDCP1-202ENST00000425231 ZBTB38Q8NAP3 1195 aaPredicted RBP27.73■■■□□ 2.03
CDCP1-202ENST00000425231 JDP2Q8WYK2 163 aa27.73■■■□□ 2.03
CDCP1-202ENST00000425231 METTL22Q9BUU2 404 aaPredicted RBP27.73■■■□□ 2.03
CDCP1-202ENST00000425231 TMX4Q9H1E5 349 aaPredicted RBP27.73■■■□□ 2.03
CDCP1-202ENST00000425231 IRS4O14654 1257 aaPredicted RBP27.72■■■□□ 2.03
CDCP1-202ENST00000425231 CCDC191Q8NCU4 936 aa27.72■■■□□ 2.03
CDCP1-202ENST00000425231 STK31Q9BXU1 1019 aa27.71■■■□□ 2.03
CDCP1-202ENST00000425231 RTFDC1Q9BY42 306 aaPredicted RBP27.71■■■□□ 2.03
CDCP1-202ENST00000425231 KSR2Q6VAB6 950 aa27.7■■■□□ 2.03
CDCP1-202ENST00000425231 LARGE2Q8N3Y3 721 aa27.7■■■□□ 2.03
CDCP1-202ENST00000425231 DNAJC5GQ8N7S2 189 aa27.7■■■□□ 2.03
CDCP1-202ENST00000425231 MAP3K2Q9Y2U5 619 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms