RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
IGHV3-47-201ENST00000425060 C21orf2O43822 256 aa23.11■■□□□ 1.29
IGHV3-47-201ENST00000425060 PRELPP51888 382 aa23.11■■□□□ 1.29
IGHV3-47-201ENST00000425060 C9orf131Q5VYM1 1079 aa23.11■■□□□ 1.29
IGHV3-47-201ENST00000425060 PRPF40BQ6NWY9 871 aaKnown RBP23.11■■□□□ 1.29
IGHV3-47-201ENST00000425060 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
IGHV3-47-201ENST00000425060 ARFGEF2Q9Y6D5 1785 aa23.1■■□□□ 1.29
IGHV3-47-201ENST00000425060 NFKBIEO00221 500 aa23.1■■□□□ 1.29
IGHV3-47-201ENST00000425060 SBF1O95248 1867 aa23.1■■□□□ 1.29
IGHV3-47-201ENST00000425060 RASSF7Q02833 373 aa23.09■■□□□ 1.29
IGHV3-47-201ENST00000425060 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
IGHV3-47-201ENST00000425060 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.29
IGHV3-47-201ENST00000425060 TRIM28Q13263 835 aaKnown RBP23.08■■□□□ 1.29
IGHV3-47-201ENST00000425060 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
IGHV3-47-201ENST00000425060 VAMP4O75379 141 aa23.07■■□□□ 1.28
IGHV3-47-201ENST00000425060 ALDH1B1P30837 517 aa23.07■■□□□ 1.28
IGHV3-47-201ENST00000425060 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
IGHV3-47-201ENST00000425060 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
IGHV3-47-201ENST00000425060 SYNE4Q8N205 404 aa23.07■■□□□ 1.28
IGHV3-47-201ENST00000425060 ATP5J2-PTCD1G3V325 749 aa23.06■■□□□ 1.28
IGHV3-47-201ENST00000425060 RIC3Q7Z5B4 369 aa23.06■■□□□ 1.28
IGHV3-47-201ENST00000425060 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
IGHV3-47-201ENST00000425060 TRMT112Q9UI30 125 aaKnown RBP23.06■■□□□ 1.28
IGHV3-47-201ENST00000425060 FER1L6Q2WGJ9 1857 aa23.06■■□□□ 1.28
IGHV3-47-201ENST00000425060 CACNA1SQ13698 1873 aa23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 TCERG1O14776 1098 aaKnown RBP23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 LMNB1P20700 586 aa23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 NLRP3Q96P20 1036 aa23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 LTBP3Q9NS15 1303 aa23.05■■□□□ 1.28
IGHV3-47-201ENST00000425060 SOGA3Q5TF21 947 aa23.04■■□□□ 1.28
IGHV3-47-201ENST00000425060 STK31Q9BXU1 1019 aa23.04■■□□□ 1.28
IGHV3-47-201ENST00000425060 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
IGHV3-47-201ENST00000425060 SLC4A2P04920 1241 aa23.03■■□□□ 1.28
IGHV3-47-201ENST00000425060 G2E3Q7L622 706 aa23.03■■□□□ 1.28
IGHV3-47-201ENST00000425060 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
IGHV3-47-201ENST00000425060 GPBP1L1Q9HC44 474 aaPredicted RBP23.03■■□□□ 1.28
IGHV3-47-201ENST00000425060 HCLS1P14317 486 aaPredicted RBP23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 OLFM4Q6UX06 510 aa23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 ZNF526Q8TF50 670 aaPredicted RBP23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 RPGRQ92834 1020 aaKnown RBP23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 ZNF428Q96B54 188 aa23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 METTL22Q9BUU2 404 aaPredicted RBP23.02■■□□□ 1.28
IGHV3-47-201ENST00000425060 DDX58O95786 925 aaKnown RBP23.01■■□□□ 1.27
IGHV3-47-201ENST00000425060 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
IGHV3-47-201ENST00000425060 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
IGHV3-47-201ENST00000425060 RBM17Q96I25 401 aaKnown RBP23.01■■□□□ 1.27
IGHV3-47-201ENST00000425060 MYD88Q99836 296 aa23.01■■□□□ 1.27
IGHV3-47-201ENST00000425060 SNED1Q8TER0 1413 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 CCDC93Q567U6 631 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 FAM89AQ96GI7 184 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 TAOK3Q9H2K8 898 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 MAP3K2Q9Y2U5 619 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 ZC3H4Q9UPT8 1303 aaKnown RBP23■■□□□ 1.27
IGHV3-47-201ENST00000425060 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
IGHV3-47-201ENST00000425060 PI4KAP2A4QPH2 592 aa22.99■■□□□ 1.27
IGHV3-47-201ENST00000425060 PI4KAP1Q8N8J0 262 aa22.99■■□□□ 1.27
IGHV3-47-201ENST00000425060 CCDC191Q8NCU4 936 aa22.99■■□□□ 1.27
IGHV3-47-201ENST00000425060 LAMB2P55268 1798 aa22.99■■□□□ 1.27
IGHV3-47-201ENST00000425060 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
IGHV3-47-201ENST00000425060 FLIIQ13045 1269 aa22.97■■□□□ 1.27
IGHV3-47-201ENST00000425060 RTKN2Q8IZC4 609 aa22.97■■□□□ 1.27
IGHV3-47-201ENST00000425060 MIER1Q8N108 512 aa22.97■■□□□ 1.27
IGHV3-47-201ENST00000425060 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
IGHV3-47-201ENST00000425060 CACNA1FO60840 1977 aa22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 KIF3CO14782 793 aa22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 CC2D2BQ6DHV5 1058 aa22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 ABCC4O15439 1325 aa22.96■■□□□ 1.27
IGHV3-47-201ENST00000425060 SLFN5Q08AF3 891 aa22.95■■□□□ 1.26
IGHV3-47-201ENST00000425060 SLC51AQ86UW1 340 aa22.95■■□□□ 1.26
IGHV3-47-201ENST00000425060 DICER1Q9UPY3 1922 aaKnown RBP22.95■■□□□ 1.26
IGHV3-47-201ENST00000425060 E9PSI1 815 aa22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 IRS4O14654 1257 aaPredicted RBP22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 PPEF1O14829 653 aaPredicted RBP22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 PCCAP05165 728 aaPredicted RBP22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 CWC25Q9NXE8 425 aaPredicted RBP22.94■■□□□ 1.26
IGHV3-47-201ENST00000425060 PSMD1Q99460 953 aa22.93■■□□□ 1.26
IGHV3-47-201ENST00000425060 NMRK2Q9NPI5 230 aa22.93■■□□□ 1.26
IGHV3-47-201ENST00000425060 GLTPD2A6NH11 291 aa22.92■■□□□ 1.26
IGHV3-47-201ENST00000425060 BBOX1O75936 387 aa22.92■■□□□ 1.26
IGHV3-47-201ENST00000425060 GRIPAP1Q4V328 841 aa22.92■■□□□ 1.26
IGHV3-47-201ENST00000425060 TRMT2AQ8IZ69 625 aaKnown RBP22.92■■□□□ 1.26
IGHV3-47-201ENST00000425060 ATP6V0A2Q9Y487 856 aa22.92■■□□□ 1.26
IGHV3-47-201ENST00000425060 TIAM2Q8IVF5 1701 aa22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 KDM2BQ8NHM5 1336 aa22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 FKBP5Q13451 457 aaPredicted RBP22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 GRAPQ13588 217 aa22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 CDCA7LQ96GN5 454 aa22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 ZNF277Q9NRM2 450 aaPredicted RBP22.91■■□□□ 1.26
IGHV3-47-201ENST00000425060 NEURL1BA8MQ27 555 aa22.9■■□□□ 1.26
IGHV3-47-201ENST00000425060 NEXNQ0ZGT2 675 aa22.9■■□□□ 1.26
IGHV3-47-201ENST00000425060 CWF19L2Q2TBE0 894 aaKnown RBP22.9■■□□□ 1.26
IGHV3-47-201ENST00000425060 SP8Q8IXZ3 490 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms