RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PSMD1Q99460 953 aa23.23■■□□□ 1.31
GPC1-203ENST00000425056 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
GPC1-203ENST00000425056 CHL1O00533 1208 aa23.22■■□□□ 1.31
GPC1-203ENST00000425056 ANXA1P04083 346 aa23.22■■□□□ 1.31
GPC1-203ENST00000425056 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
GPC1-203ENST00000425056 ZNF541Q9H0D2 1346 aa23.22■■□□□ 1.31
GPC1-203ENST00000425056 IQCA1LA6NCM1 817 aa23.21■■□□□ 1.31
GPC1-203ENST00000425056 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
GPC1-203ENST00000425056 CC2D2BQ6DHV5 1058 aa23.21■■□□□ 1.31
GPC1-203ENST00000425056 LAMB2P55268 1798 aa23.21■■□□□ 1.31
GPC1-203ENST00000425056 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.3
GPC1-203ENST00000425056 SYNE4Q8N205 404 aa23.2■■□□□ 1.3
GPC1-203ENST00000425056 CRAMP1Q96RY5 1269 aa23.2■■□□□ 1.3
GPC1-203ENST00000425056 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
GPC1-203ENST00000425056 PCNTO95613 3336 aa23.2■■□□□ 1.3
GPC1-203ENST00000425056 POTEIP0CG38 1075 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 POTEJP0CG39 1038 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 KRT24Q2M2I5 525 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 CHADLQ6NUI6 762 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 C3orf67Q6ZVT6 689 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
GPC1-203ENST00000425056 COL4A5P29400 1685 aa23.19■■□□□ 1.3
GPC1-203ENST00000425056 FZD9O00144 591 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 GRIPAP1Q4V328 841 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 COPS6Q7L5N1 327 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 XAGE3Q8WTP9 111 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 RBM17Q96I25 401 aaKnown RBP23.18■■□□□ 1.3
GPC1-203ENST00000425056 UTP14AQ9BVJ6 771 aaKnown RBP23.18■■□□□ 1.3
GPC1-203ENST00000425056 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
GPC1-203ENST00000425056 ADAMTSL1Q8N6G6 1762 aa23.18■■□□□ 1.3
GPC1-203ENST00000425056 HOXB7P09629 217 aa23.17■■□□□ 1.3
GPC1-203ENST00000425056 HSP90AB3PQ58FF7 597 aa23.17■■□□□ 1.3
GPC1-203ENST00000425056 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
GPC1-203ENST00000425056 TAF1DQ9H5J8 278 aaPredicted RBP23.17■■□□□ 1.3
GPC1-203ENST00000425056 PPEF1O14829 653 aaPredicted RBP23.16■■□□□ 1.3
GPC1-203ENST00000425056 NLRP3Q96P20 1036 aa23.16■■□□□ 1.3
GPC1-203ENST00000425056 AIMP1Q12904 312 aaKnown RBP23.15■■□□□ 1.3
GPC1-203ENST00000425056 LDHDQ86WU2 507 aa23.15■■□□□ 1.3
GPC1-203ENST00000425056 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
GPC1-203ENST00000425056 SLC51AQ86UW1 340 aa23.14■■□□□ 1.29
GPC1-203ENST00000425056 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
GPC1-203ENST00000425056 CHPF2Q9P2E5 772 aa23.14■■□□□ 1.29
GPC1-203ENST00000425056 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 GPC2Q8N158 579 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 HACL1Q9UJ83 578 aa23.13■■□□□ 1.29
GPC1-203ENST00000425056 ABCC4O15439 1325 aa23.12■■□□□ 1.29
GPC1-203ENST00000425056 DDX60Q8IY21 1712 aaKnown RBP23.11■■□□□ 1.29
GPC1-203ENST00000425056 CREBZFQ9NS37 354 aa23.11■■□□□ 1.29
GPC1-203ENST00000425056 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
GPC1-203ENST00000425056 EPHX2P34913 555 aa23.1■■□□□ 1.29
GPC1-203ENST00000425056 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
GPC1-203ENST00000425056 ATP6V0A2Q9Y487 856 aa23.1■■□□□ 1.29
GPC1-203ENST00000425056 LTBP1Q14766 1721 aa23.1■■□□□ 1.29
GPC1-203ENST00000425056 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
GPC1-203ENST00000425056 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
GPC1-203ENST00000425056 PLBD2Q8NHP8 589 aa23.09■■□□□ 1.29
GPC1-203ENST00000425056 MBIPQ9NS73 344 aa23.09■■□□□ 1.29
GPC1-203ENST00000425056 TRMT112Q9UI30 125 aaKnown RBP23.09■■□□□ 1.29
GPC1-203ENST00000425056 LRRC37AA6NMS7 1700 aa23.08■■□□□ 1.29
GPC1-203ENST00000425056 TCERG1O14776 1098 aaKnown RBP23.08■■□□□ 1.29
GPC1-203ENST00000425056 ZNF853P0CG23 659 aa23.08■■□□□ 1.29
GPC1-203ENST00000425056 HCLS1P14317 486 aaPredicted RBP23.08■■□□□ 1.29
GPC1-203ENST00000425056 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
GPC1-203ENST00000425056 EAPPQ56P03 285 aaPredicted RBP23.08■■□□□ 1.29
GPC1-203ENST00000425056 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
GPC1-203ENST00000425056 PNMA8AQ86V59 439 aaPredicted RBP23.08■■□□□ 1.29
GPC1-203ENST00000425056 TMX4Q9H1E5 349 aaPredicted RBP23.07■■□□□ 1.28
GPC1-203ENST00000425056 APAF1O14727 1248 aa23.06■■□□□ 1.28
GPC1-203ENST00000425056 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
GPC1-203ENST00000425056 ANKRD13DQ6ZTN6 518 aa23.06■■□□□ 1.28
GPC1-203ENST00000425056 RTFDC1Q9BY42 306 aaPredicted RBP23.06■■□□□ 1.28
GPC1-203ENST00000425056 VPS33BQ9H267 617 aa23.06■■□□□ 1.28
GPC1-203ENST00000425056 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
GPC1-203ENST00000425056 TAF1P21675 1872 aa23.06■■□□□ 1.28
GPC1-203ENST00000425056 PPIP5K2O43314 1243 aa23.05■■□□□ 1.28
GPC1-203ENST00000425056 BBOX1O75936 387 aa23.05■■□□□ 1.28
GPC1-203ENST00000425056 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
GPC1-203ENST00000425056 ISCA1Q9BUE6 129 aa23.05■■□□□ 1.28
GPC1-203ENST00000425056 IFT57Q9NWB7 429 aa23.05■■□□□ 1.28
GPC1-203ENST00000425056 SCNN1DP51172 638 aa23.04■■□□□ 1.28
GPC1-203ENST00000425056 CALD1Q05682 793 aaKnown RBP23.04■■□□□ 1.28
GPC1-203ENST00000425056 GRAPQ13588 217 aa23.04■■□□□ 1.28
GPC1-203ENST00000425056 AOC3Q16853 763 aa23.04■■□□□ 1.28
GPC1-203ENST00000425056 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
GPC1-203ENST00000425056 SUPT20HQ8NEM7 779 aa23.04■■□□□ 1.28
GPC1-203ENST00000425056 GRAPLQ8TC17 118 aaPredicted RBP23.04■■□□□ 1.28
GPC1-203ENST00000425056 GJA3Q9Y6H8 435 aa23.04■■□□□ 1.28
GPC1-203ENST00000425056 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
GPC1-203ENST00000425056 DUOX1Q9NRD9 1551 aa23.03■■□□□ 1.28
GPC1-203ENST00000425056 SP8Q8IXZ3 490 aa23.03■■□□□ 1.28
GPC1-203ENST00000425056 HSPA1AP0DMV8 641 aaKnown RBP23.02■■□□□ 1.28
GPC1-203ENST00000425056 HSPA1BP0DMV9 641 aaKnown RBP23.02■■□□□ 1.28
GPC1-203ENST00000425056 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
GPC1-203ENST00000425056 GNAI1P63096 354 aa23.02■■□□□ 1.28
GPC1-203ENST00000425056 CLEC11AQ9Y240 323 aa23.02■■□□□ 1.28
GPC1-203ENST00000425056 DPP8Q6V1X1 898 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms