RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 PI4K2BQ8TCG2 481 aa20.15■□□□□ 0.82
CMTM3-202ENST00000424011 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
CMTM3-202ENST00000424011 CCDC191Q8NCU4 936 aa20.14■□□□□ 0.82
CMTM3-202ENST00000424011 NAP1L5Q96NT1 182 aaPredicted RBP20.14■□□□□ 0.82
CMTM3-202ENST00000424011 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.81
CMTM3-202ENST00000424011 RABEP1Q15276 862 aa20.14■□□□□ 0.81
CMTM3-202ENST00000424011 CNTROBQ8N137 903 aa20.14■□□□□ 0.81
CMTM3-202ENST00000424011 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
CMTM3-202ENST00000424011 AFF2P51816 1311 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 CHMLP26374 656 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 ESYT1Q9BSJ8 1104 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 H7C1W4 665 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 SYTL4Q96C24 671 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-202ENST00000424011 COPRSQ9NQ92 184 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
CMTM3-202ENST00000424011 TUBGCP6Q96RT7 1819 aa20.12■□□□□ 0.81
CMTM3-202ENST00000424011 K7ELQ4 463 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-202ENST00000424011 EPB41L2O43491 1005 aaKnown RBP20.11■□□□□ 0.81
CMTM3-202ENST00000424011 CASP7P55210 303 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 DNAJC10Q8IXB1 793 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 ITGB4P16144 1822 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-202ENST00000424011 ZBTB3Q9H5J0 574 aa20.11■□□□□ 0.81
CMTM3-202ENST00000424011 AACSQ86V21 672 aa20.1■□□□□ 0.81
CMTM3-202ENST00000424011 AFDNP55196 1824 aaKnown RBP20.1■□□□□ 0.81
CMTM3-202ENST00000424011 SASH1O94885 1247 aa20.1■□□□□ 0.81
CMTM3-202ENST00000424011 MCCP23508 829 aa20.1■□□□□ 0.81
CMTM3-202ENST00000424011 CLCN1P35523 988 aa20.1■□□□□ 0.81
CMTM3-202ENST00000424011 NUP188Q5SRE5 1749 aa20.09■□□□□ 0.81
CMTM3-202ENST00000424011 SIL1Q9H173 461 aa20.08■□□□□ 0.81
CMTM3-202ENST00000424011 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.81
CMTM3-202ENST00000424011 TRPC5Q9UL62 973 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-202ENST00000424011 MCM4P33991 863 aa20.08■□□□□ 0.8
CMTM3-202ENST00000424011 RFX5P48382 616 aaPredicted RBP20.08■□□□□ 0.8
CMTM3-202ENST00000424011 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.8
CMTM3-202ENST00000424011 TCIRG1Q13488 830 aa20.08■□□□□ 0.8
CMTM3-202ENST00000424011 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.8
CMTM3-202ENST00000424011 ISCA1Q9BUE6 129 aa20.07■□□□□ 0.8
CMTM3-202ENST00000424011 A0A0G2JS52 829 aa20.07■□□□□ 0.8
CMTM3-202ENST00000424011 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
CMTM3-202ENST00000424011 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
CMTM3-202ENST00000424011 ATRNO75882 1429 aa20.06■□□□□ 0.8
CMTM3-202ENST00000424011 KAT6BQ8WYB5 2073 aa20.06■□□□□ 0.8
CMTM3-202ENST00000424011 CYP19A1P11511 503 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-202ENST00000424011 LMBR1LQ6UX01 489 aa20.06■□□□□ 0.8
CMTM3-202ENST00000424011 EAF2Q96CJ1 260 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-202ENST00000424011 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-202ENST00000424011 DOT1LQ8TEK3 1739 aa20.06■□□□□ 0.8
CMTM3-202ENST00000424011 ONECUT3O60422 494 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-202ENST00000424011 FOXO4P98177 505 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 ST18O60284 1047 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 HSP90AB3PQ58FF7 597 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 ANO2Q9NQ90 1003 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 CIZ1Q9ULV3 898 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-202ENST00000424011 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
CMTM3-202ENST00000424011 ANAPC15P60006 121 aa20.04■□□□□ 0.8
CMTM3-202ENST00000424011 KLHDC4Q8TBB5 520 aa20.04■□□□□ 0.8
CMTM3-202ENST00000424011 RUFY2Q8WXA3 655 aa20.04■□□□□ 0.8
CMTM3-202ENST00000424011 MAP4K4O95819 1239 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-202ENST00000424011 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
CMTM3-202ENST00000424011 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
CMTM3-202ENST00000424011 GIGYF2Q6Y7W6 1299 aaKnown RBP20.03■□□□□ 0.8
CMTM3-202ENST00000424011 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
CMTM3-202ENST00000424011 HIP1O00291 1037 aa20.02■□□□□ 0.8
CMTM3-202ENST00000424011 KCNQ2O43526 872 aa20.02■□□□□ 0.8
CMTM3-202ENST00000424011 CCDC8Q9H0W5 538 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-202ENST00000424011 SGSM2O43147 1006 aa20.02■□□□□ 0.79
CMTM3-202ENST00000424011 IL6STP40189 918 aaPredicted RBP20.02■□□□□ 0.79
CMTM3-202ENST00000424011 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.79
CMTM3-202ENST00000424011 DIAPH3Q9NSV4 1193 aa20.02■□□□□ 0.79
CMTM3-202ENST00000424011 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
CMTM3-202ENST00000424011 PCCAP05165 728 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-202ENST00000424011 TNNI3KQ59H18 835 aa20.01■□□□□ 0.79
CMTM3-202ENST00000424011 KIAA1211Q6ZU35 1233 aa20.01■□□□□ 0.79
CMTM3-202ENST00000424011 ARXQ96QS3 562 aa20.01■□□□□ 0.79
CMTM3-202ENST00000424011 FPGT-TNNI3KV9GXZ4 949 aa20.01■□□□□ 0.79
CMTM3-202ENST00000424011 ZBTB38Q8NAP3 1195 aaPredicted RBP20■□□□□ 0.79
CMTM3-202ENST00000424011 TJP1Q07157 1748 aa19.99■□□□□ 0.79
CMTM3-202ENST00000424011 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
CMTM3-202ENST00000424011 TFCP2Q12800 502 aa19.99■□□□□ 0.79
CMTM3-202ENST00000424011 IL17RAQ96F46 866 aa19.99■□□□□ 0.79
CMTM3-202ENST00000424011 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
CMTM3-202ENST00000424011 PLA2G12BQ9BX93 195 aa19.99■□□□□ 0.79
CMTM3-202ENST00000424011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.99■□□□□ 0.79
CMTM3-202ENST00000424011 SEPT12Q8IYM1 358 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 IL25Q9H293 177 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 GPR108Q9NPR9 543 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 ZBTB1Q9Y2K1 713 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 CIAO1O76071 339 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 MCM2P49736 904 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-202ENST00000424011 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
CMTM3-202ENST00000424011 ATP5JP18859 108 aa19.97■□□□□ 0.79
CMTM3-202ENST00000424011 CWC27Q6UX04 472 aaKnown RBP19.97■□□□□ 0.79
CMTM3-202ENST00000424011 TLR7Q9NYK1 1049 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms