RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 ADCY9O60503 1353 aa28.91■■■□□ 2.22
EPDR1-202ENST00000423717 NTSR2O95665 410 aa28.91■■■□□ 2.22
EPDR1-202ENST00000423717 NEXNQ0ZGT2 675 aa28.91■■■□□ 2.22
EPDR1-202ENST00000423717 MRPL50Q8N5N7 158 aaKnown RBP28.91■■■□□ 2.22
EPDR1-202ENST00000423717 SMC4Q9NTJ3 1288 aa28.91■■■□□ 2.22
EPDR1-202ENST00000423717 CT47B1P0C2W7 299 aaPredicted RBP28.9■■■□□ 2.22
EPDR1-202ENST00000423717 ZNF622Q969S3 477 aaKnown RBP eCLIP28.89■■■□□ 2.22
EPDR1-202ENST00000423717 IBTKQ9P2D0 1353 aaPredicted RBP28.88■■■□□ 2.21
EPDR1-202ENST00000423717 ALDH1L2Q3SY69 923 aa28.88■■■□□ 2.21
EPDR1-202ENST00000423717 RTL5Q5HYW3 569 aaPredicted RBP28.88■■■□□ 2.21
EPDR1-202ENST00000423717 DNAAF4Q8WXU2 420 aa28.88■■■□□ 2.21
EPDR1-202ENST00000423717 PIM2Q9P1W9 311 aa28.88■■■□□ 2.21
EPDR1-202ENST00000423717 BCS1LQ9Y276 419 aa28.88■■■□□ 2.21
EPDR1-202ENST00000423717 ABCC12Q96J65 1359 aa28.88■■■□□ 2.21
EPDR1-202ENST00000423717 F6X3S4 739 aa28.87■■■□□ 2.21
EPDR1-202ENST00000423717 KCNA3P22001 575 aa28.86■■■□□ 2.21
EPDR1-202ENST00000423717 FAM89AQ96GI7 184 aa28.85■■■□□ 2.21
EPDR1-202ENST00000423717 CWC25Q9NXE8 425 aaPredicted RBP28.85■■■□□ 2.21
EPDR1-202ENST00000423717 PDZRN3Q9UPQ7 1066 aa28.85■■■□□ 2.21
EPDR1-202ENST00000423717 SH3TC1Q8TE82 1336 aa28.85■■■□□ 2.21
EPDR1-202ENST00000423717 YBX3P16989 372 aaKnown RBP eCLIP28.84■■■□□ 2.21
EPDR1-202ENST00000423717 TRIM28Q13263 835 aaKnown RBP28.84■■■□□ 2.21
EPDR1-202ENST00000423717 SLC4A10Q6U841 1118 aa28.84■■■□□ 2.21
EPDR1-202ENST00000423717 SYNE4Q8N205 404 aa28.84■■■□□ 2.21
EPDR1-202ENST00000423717 CCDC191Q8NCU4 936 aa28.84■■■□□ 2.21
EPDR1-202ENST00000423717 COL11A2P13942 1736 aaPredicted RBP28.83■■■□□ 2.21
EPDR1-202ENST00000423717 HCLS1P14317 486 aaPredicted RBP28.83■■■□□ 2.21
EPDR1-202ENST00000423717 CWF19L2Q2TBE0 894 aaKnown RBP28.83■■■□□ 2.21
EPDR1-202ENST00000423717 DALRD3Q5D0E6 543 aaKnown RBP28.83■■■□□ 2.21
EPDR1-202ENST00000423717 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
EPDR1-202ENST00000423717 TNRC6CQ9HCJ0 1690 aaKnown RBP28.83■■■□□ 2.21
EPDR1-202ENST00000423717 IGKV5-2P06315 115 aa28.82■■■□□ 2.2
EPDR1-202ENST00000423717 JARID2Q92833 1246 aaPredicted RBP28.82■■■□□ 2.2
EPDR1-202ENST00000423717 NLRP3Q96P20 1036 aa28.82■■■□□ 2.2
EPDR1-202ENST00000423717 BRCA1P38398 1863 aaKnown RBP28.81■■■□□ 2.2
EPDR1-202ENST00000423717 DLEC1Q9Y238 1755 aa28.81■■■□□ 2.2
EPDR1-202ENST00000423717 RARSP54136 660 aaKnown RBP28.81■■■□□ 2.2
EPDR1-202ENST00000423717 MASTLQ96GX5 879 aa28.81■■■□□ 2.2
EPDR1-202ENST00000423717 CACNA1SQ13698 1873 aa28.8■■■□□ 2.2
EPDR1-202ENST00000423717 SRGNP10124 158 aa28.8■■■□□ 2.2
EPDR1-202ENST00000423717 TTLL6Q8N841 843 aa28.8■■■□□ 2.2
EPDR1-202ENST00000423717 RPGRQ92834 1020 aaKnown RBP28.8■■■□□ 2.2
EPDR1-202ENST00000423717 PTPRCP08575 1304 aa28.79■■■□□ 2.2
EPDR1-202ENST00000423717 NEURL1BA8MQ27 555 aa28.79■■■□□ 2.2
EPDR1-202ENST00000423717 ZBTB38Q8NAP3 1195 aaPredicted RBP28.79■■■□□ 2.2
EPDR1-202ENST00000423717 ZNF219Q9P2Y4 722 aaPredicted RBP28.79■■■□□ 2.2
EPDR1-202ENST00000423717 GRIN3BO60391 1043 aa28.78■■■□□ 2.2
EPDR1-202ENST00000423717 NPR1P16066 1061 aa28.78■■■□□ 2.2
EPDR1-202ENST00000423717 SLC10A5Q5PT55 438 aa28.78■■■□□ 2.2
EPDR1-202ENST00000423717 STYK1Q6J9G0 422 aa28.78■■■□□ 2.2
EPDR1-202ENST00000423717 LINS1Q8NG48 757 aa28.78■■■□□ 2.2
EPDR1-202ENST00000423717 NOB1Q9ULX3 412 aaKnown RBP28.78■■■□□ 2.2
EPDR1-202ENST00000423717 IRS4O14654 1257 aaPredicted RBP28.77■■■□□ 2.2
EPDR1-202ENST00000423717 C3orf67Q6ZVT6 689 aa28.77■■■□□ 2.2
EPDR1-202ENST00000423717 CNKSR1Q969H4 720 aa28.77■■■□□ 2.2
EPDR1-202ENST00000423717 PCCAP05165 728 aaPredicted RBP28.76■■■□□ 2.19
EPDR1-202ENST00000423717 KLRG2A4D1S0 409 aaPredicted RBP28.75■■■□□ 2.19
EPDR1-202ENST00000423717 BCAR3O75815 825 aa28.75■■■□□ 2.19
EPDR1-202ENST00000423717 RIC1Q4ADV7 1423 aa28.75■■■□□ 2.19
EPDR1-202ENST00000423717 GCKRQ14397 625 aa28.74■■■□□ 2.19
EPDR1-202ENST00000423717 BEND3Q5T5X7 828 aa28.74■■■□□ 2.19
EPDR1-202ENST00000423717 ARHGAP27Q6ZUM4 889 aa28.74■■■□□ 2.19
EPDR1-202ENST00000423717 FRAT1Q92837 279 aaPredicted RBP28.74■■■□□ 2.19
EPDR1-202ENST00000423717 RBM17Q96I25 401 aaKnown RBP28.74■■■□□ 2.19
EPDR1-202ENST00000423717 LAMB2P55268 1798 aa28.74■■■□□ 2.19
EPDR1-202ENST00000423717 DDX60Q8IY21 1712 aaKnown RBP28.74■■■□□ 2.19
EPDR1-202ENST00000423717 SRCIN1Q9C0H9 1055 aa28.73■■■□□ 2.19
EPDR1-202ENST00000423717 ARFGEF1Q9Y6D6 1849 aa28.72■■■□□ 2.19
EPDR1-202ENST00000423717 HSP90B1P14625 803 aaKnown RBP28.72■■■□□ 2.19
EPDR1-202ENST00000423717 ALDH1B1P30837 517 aa28.72■■■□□ 2.19
EPDR1-202ENST00000423717 CRY2Q49AN0 593 aa28.72■■■□□ 2.19
EPDR1-202ENST00000423717 UBE3BQ7Z3V4 1068 aa28.72■■■□□ 2.19
EPDR1-202ENST00000423717 KIF16BQ96L93 1317 aa28.71■■■□□ 2.19
EPDR1-202ENST00000423717 PRPF40BQ6NWY9 871 aaKnown RBP28.71■■■□□ 2.19
EPDR1-202ENST00000423717 C21orf2O43822 256 aa28.7■■■□□ 2.18
EPDR1-202ENST00000423717 API5Q9BZZ5 524 aaKnown RBP28.7■■■□□ 2.18
EPDR1-202ENST00000423717 SLX4Q8IY92 1834 aa28.7■■■□□ 2.18
EPDR1-202ENST00000423717 BRPF1P55201 1214 aaPredicted RBP28.69■■■□□ 2.18
EPDR1-202ENST00000423717 C9orf78Q9NZ63 289 aaPredicted RBP28.69■■■□□ 2.18
EPDR1-202ENST00000423717 H7C1W4 665 aa28.68■■■□□ 2.18
EPDR1-202ENST00000423717 PDE8AO60658 829 aa28.68■■■□□ 2.18
EPDR1-202ENST00000423717 ALDH1L1O75891 902 aa28.68■■■□□ 2.18
EPDR1-202ENST00000423717 DDX46Q7L014 1031 aaKnown RBP28.68■■■□□ 2.18
EPDR1-202ENST00000423717 CCDC85AQ96PX6 553 aaPredicted RBP28.68■■■□□ 2.18
EPDR1-202ENST00000423717 IPO8O15397 1037 aaKnown RBP28.67■■■□□ 2.18
EPDR1-202ENST00000423717 CDHR2Q9BYE9 1310 aa28.67■■■□□ 2.18
EPDR1-202ENST00000423717 HOXA10P31260 410 aaPredicted RBP28.66■■■□□ 2.18
EPDR1-202ENST00000423717 CRAMP1Q96RY5 1269 aa28.66■■■□□ 2.18
EPDR1-202ENST00000423717 GRM8O00222 908 aa28.64■■■□□ 2.18
EPDR1-202ENST00000423717 SF3B3Q15393 1217 aaKnown RBP28.64■■■□□ 2.18
EPDR1-202ENST00000423717 ABCC4O15439 1325 aa28.64■■■□□ 2.17
EPDR1-202ENST00000423717 TAF1P21675 1872 aa28.63■■■□□ 2.17
EPDR1-202ENST00000423717 PPEF1O14829 653 aaPredicted RBP28.62■■■□□ 2.17
EPDR1-202ENST00000423717 CCDC152Q4G0S7 254 aa28.62■■■□□ 2.17
EPDR1-202ENST00000423717 ARHGAP45Q92619 1136 aa28.62■■■□□ 2.17
EPDR1-202ENST00000423717 MYH3P11055 1940 aa28.61■■■□□ 2.17
EPDR1-202ENST00000423717 CHD4Q14839 1912 aa28.61■■■□□ 2.17
EPDR1-202ENST00000423717 CCT4P50991 539 aaKnown RBP28.61■■■□□ 2.17
EPDR1-202ENST00000423717 CTSWP56202 376 aa28.61■■■□□ 2.17
EPDR1-202ENST00000423717 ZKSCAN2Q63HK3 967 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms