RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 RGS19P49795 217 aa22.36■■□□□ 1.17
CHCHD3-202ENST00000423635 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
CHCHD3-202ENST00000423635 USP50Q70EL3 339 aaPredicted RBP22.36■■□□□ 1.17
CHCHD3-202ENST00000423635 COL4A5P29400 1685 aa22.36■■□□□ 1.17
CHCHD3-202ENST00000423635 FMR1Q06787 632 aaKnown RBP eCLIP22.35■■□□□ 1.172e-8■■■■■ 60
CHCHD3-202ENST00000423635 CST9Q5W186 159 aa22.35■■□□□ 1.17
CHCHD3-202ENST00000423635 CFAP53Q96M91 514 aa22.35■■□□□ 1.17
CHCHD3-202ENST00000423635 GPR101Q96P66 508 aaPredicted RBP22.35■■□□□ 1.17
CHCHD3-202ENST00000423635 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
CHCHD3-202ENST00000423635 LTBP1Q14766 1721 aa22.35■■□□□ 1.17
CHCHD3-202ENST00000423635 TAF7Q15545 349 aaPredicted RBP22.34■■□□□ 1.17
CHCHD3-202ENST00000423635 NUTM1Q86Y26 1132 aa22.34■■□□□ 1.17
CHCHD3-202ENST00000423635 BEGAINQ9BUH8 593 aa22.34■■□□□ 1.17
CHCHD3-202ENST00000423635 ABCC12Q96J65 1359 aa22.34■■□□□ 1.17
CHCHD3-202ENST00000423635 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 DCTN1Q14203 1278 aa22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 CYP4F22Q6NT55 531 aa22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 LARGE2Q8N3Y3 721 aa22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 TLL2Q9Y6L7 1015 aa22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 THSD7BQ9C0I4 1608 aa22.33■■□□□ 1.17
CHCHD3-202ENST00000423635 MAP2K2P36507 400 aa22.32■■□□□ 1.16
CHCHD3-202ENST00000423635 CRAMP1Q96RY5 1269 aa22.32■■□□□ 1.16
CHCHD3-202ENST00000423635 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
CHCHD3-202ENST00000423635 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
CHCHD3-202ENST00000423635 RPGRQ92834 1020 aaKnown RBP22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 IBTKQ9P2D0 1353 aaPredicted RBP22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 U2AF1L5P0DN76 240 aaPredicted RBP22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 U2AF1Q01081 240 aaKnown RBP eCLIP22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 MLLT1Q03111 559 aaPredicted RBP22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 VPS33BQ9H267 617 aa22.31■■□□□ 1.16
CHCHD3-202ENST00000423635 CCDC85CA6NKD9 419 aa22.3■■□□□ 1.16
CHCHD3-202ENST00000423635 TRAF5O00463 557 aa22.3■■□□□ 1.16
CHCHD3-202ENST00000423635 PAXIP1Q6ZW49 1069 aaPredicted RBP22.3■■□□□ 1.16
CHCHD3-202ENST00000423635 RBM17Q96I25 401 aaKnown RBP22.3■■□□□ 1.16
CHCHD3-202ENST00000423635 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
CHCHD3-202ENST00000423635 SUSD4Q5VX71 490 aa22.29■■□□□ 1.16
CHCHD3-202ENST00000423635 NIM1KQ8IY84 436 aa22.29■■□□□ 1.16
CHCHD3-202ENST00000423635 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
CHCHD3-202ENST00000423635 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
CHCHD3-202ENST00000423635 ADARB2Q9NS39 739 aaKnown RBP22.29■■□□□ 1.16
CHCHD3-202ENST00000423635 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
CHCHD3-202ENST00000423635 TTLL7Q6ZT98 887 aa22.28■■□□□ 1.16
CHCHD3-202ENST00000423635 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
CHCHD3-202ENST00000423635 TRPM7Q96QT4 1865 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 NUP98P52948 1817 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 PPEF1O14829 653 aaPredicted RBP22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 SAPCD2Q86UD0 394 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 ZNF34Q8IZ26 560 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 HHIPL1Q96JK4 782 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 PGAP2Q9UHJ9 254 aa22.27■■□□□ 1.16
CHCHD3-202ENST00000423635 CA12O43570 354 aa22.26■■□□□ 1.15
CHCHD3-202ENST00000423635 GRM1Q13255 1194 aa22.26■■□□□ 1.15
CHCHD3-202ENST00000423635 KIF6Q6ZMV9 814 aa22.26■■□□□ 1.15
CHCHD3-202ENST00000423635 PPIP5K2O43314 1243 aa22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 AOC2O75106 756 aa22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 NTSR2O95665 410 aa22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 GPTP24298 496 aa22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
CHCHD3-202ENST00000423635 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 CXCL9Q07325 125 aa22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 GIGYF2Q6Y7W6 1299 aaKnown RBP22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 RTFDC1Q9BY42 306 aaPredicted RBP22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 ZNRF3Q9ULT6 936 aa22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 ATP6V0A2Q9Y487 856 aa22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 LAMB4A4D0S4 1761 aa22.24■■□□□ 1.15
CHCHD3-202ENST00000423635 TCERG1O14776 1098 aaKnown RBP22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 CELF2O95319 508 aaKnown RBP22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 PPP2R1AP30153 589 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 AOC3Q16853 763 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 C3orf67Q6ZVT6 689 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 ZBTB3Q9H5J0 574 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 TSKSQ9UJT2 592 aa22.23■■□□□ 1.15
CHCHD3-202ENST00000423635 MYL6BP14649 208 aa22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 BRPF1P55201 1214 aaPredicted RBP22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 SUPT20HQ8NEM7 779 aa22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 ZC3H15Q8WU90 426 aaKnown RBP22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 TMX4Q9H1E5 349 aaPredicted RBP22.22■■□□□ 1.15
CHCHD3-202ENST00000423635 PARP10Q53GL7 1025 aa22.21■■□□□ 1.15
CHCHD3-202ENST00000423635 MCOLN1Q9GZU1 580 aa22.2■■□□□ 1.14
CHCHD3-202ENST00000423635 CDHR2Q9BYE9 1310 aa22.2■■□□□ 1.14
CHCHD3-202ENST00000423635 GLIS2Q9BZE0 524 aaPredicted RBP22.19■■□□□ 1.14
CHCHD3-202ENST00000423635 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
CHCHD3-202ENST00000423635 BBOX1O75936 387 aa22.18■■□□□ 1.14
CHCHD3-202ENST00000423635 GMPSP49915 693 aaPredicted RBP22.18■■□□□ 1.14
CHCHD3-202ENST00000423635 HIRAP54198 1017 aaPredicted RBP22.18■■□□□ 1.14
CHCHD3-202ENST00000423635 SP8Q8IXZ3 490 aa22.18■■□□□ 1.14
CHCHD3-202ENST00000423635 PCDH10Q9P2E7 1040 aa22.18■■□□□ 1.14
CHCHD3-202ENST00000423635 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
CHCHD3-202ENST00000423635 CIAPIN1Q6FI81 312 aa22.17■■□□□ 1.14
CHCHD3-202ENST00000423635 CDC37L1Q7L3B6 337 aa22.17■■□□□ 1.14
CHCHD3-202ENST00000423635 ABCC4O15439 1325 aa22.17■■□□□ 1.14
CHCHD3-202ENST00000423635 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
CHCHD3-202ENST00000423635 TNIP1Q15025 636 aa22.16■■□□□ 1.14
CHCHD3-202ENST00000423635 LRP10Q7Z4F1 713 aa22.16■■□□□ 1.14
CHCHD3-202ENST00000423635 UTP14AQ9BVJ6 771 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms