RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 BABAM1Q9NWV8 329 aa24.56■■□□□ 1.52
AC004540.1-203ENST00000421862 HSPA1AP0DMV8 641 aaKnown RBP24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 HSPA1BP0DMV9 641 aaKnown RBP24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 GPTP24298 496 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 PDIA6Q15084 440 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 SUSD4Q5VX71 490 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 SYNE4Q8N205 404 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 TSPYL4Q9UJ04 414 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 LRRC37AA6NMS7 1700 aa24.55■■□□□ 1.52
AC004540.1-203ENST00000421862 RALBP1Q15311 655 aa24.54■■□□□ 1.52
AC004540.1-203ENST00000421862 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
AC004540.1-203ENST00000421862 HACL1Q9UJ83 578 aa24.53■■□□□ 1.52
AC004540.1-203ENST00000421862 CNTNAP1P78357 1384 aa24.53■■□□□ 1.52
AC004540.1-203ENST00000421862 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 PARP10Q53GL7 1025 aa24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 GPC2Q8N158 579 aa24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 RPGRQ92834 1020 aaKnown RBP24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 CRAMP1Q96RY5 1269 aa24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 RNF123Q5XPI4 1314 aa24.52■■□□□ 1.52
AC004540.1-203ENST00000421862 TRPM7Q96QT4 1865 aa24.51■■□□□ 1.51
AC004540.1-203ENST00000421862 THSD7BQ9C0I4 1608 aa24.51■■□□□ 1.51
AC004540.1-203ENST00000421862 RIPK4P57078 832 aa24.51■■□□□ 1.51
AC004540.1-203ENST00000421862 ITGBL1O95965 494 aaPredicted RBP24.5■■□□□ 1.51
AC004540.1-203ENST00000421862 EPHX2P34913 555 aa24.5■■□□□ 1.51
AC004540.1-203ENST00000421862 TMPOP42166 694 aaKnown RBP24.5■■□□□ 1.51
AC004540.1-203ENST00000421862 LMOD3Q0VAK6 560 aa24.5■■□□□ 1.51
AC004540.1-203ENST00000421862 C3orf67Q6ZVT6 689 aa24.5■■□□□ 1.51
AC004540.1-203ENST00000421862 TAF1P21675 1872 aa24.49■■□□□ 1.51
AC004540.1-203ENST00000421862 PROSER3Q2NL68 480 aa24.49■■□□□ 1.51
AC004540.1-203ENST00000421862 PPP1R42Q7Z4L9 355 aa24.49■■□□□ 1.51
AC004540.1-203ENST00000421862 SLC51AQ86UW1 340 aa24.49■■□□□ 1.51
AC004540.1-203ENST00000421862 PPEF1O14829 653 aaPredicted RBP24.48■■□□□ 1.51
AC004540.1-203ENST00000421862 PNMA8AQ86V59 439 aaPredicted RBP24.48■■□□□ 1.51
AC004540.1-203ENST00000421862 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
AC004540.1-203ENST00000421862 RBM17Q96I25 401 aaKnown RBP24.48■■□□□ 1.51
AC004540.1-203ENST00000421862 MKRN1Q9UHC7 482 aaKnown RBP24.48■■□□□ 1.51
AC004540.1-203ENST00000421862 MYBBP1AQ9BQG0 1328 aaKnown RBP24.47■■□□□ 1.51
AC004540.1-203ENST00000421862 DUOX1Q9NRD9 1551 aa24.46■■□□□ 1.51
AC004540.1-203ENST00000421862 EAPPQ56P03 285 aaPredicted RBP24.46■■□□□ 1.51
AC004540.1-203ENST00000421862 SLC10A5Q5PT55 438 aa24.46■■□□□ 1.51
AC004540.1-203ENST00000421862 ANXA1P04083 346 aa24.45■■□□□ 1.5
AC004540.1-203ENST00000421862 EIF2S2P20042 333 aaKnown RBP24.45■■□□□ 1.5
AC004540.1-203ENST00000421862 ABCC4O15439 1325 aa24.44■■□□□ 1.5
AC004540.1-203ENST00000421862 TMEM88BA6NKF7 163 aa24.44■■□□□ 1.5
AC004540.1-203ENST00000421862 TNS4Q8IZW8 715 aa24.44■■□□□ 1.5
AC004540.1-203ENST00000421862 NLRP3Q96P20 1036 aa24.44■■□□□ 1.5
AC004540.1-203ENST00000421862 UTP14AQ9BVJ6 771 aaKnown RBP24.44■■□□□ 1.5
AC004540.1-203ENST00000421862 EIF6P56537 245 aaKnown RBP24.43■■□□□ 1.5
AC004540.1-203ENST00000421862 SCNN1DP51172 638 aa24.42■■□□□ 1.5
AC004540.1-203ENST00000421862 HSP90AB3PQ58FF7 597 aa24.42■■□□□ 1.5
AC004540.1-203ENST00000421862 LARGE2Q8N3Y3 721 aa24.42■■□□□ 1.5
AC004540.1-203ENST00000421862 ATP6V0A2Q9Y487 856 aa24.42■■□□□ 1.5
AC004540.1-203ENST00000421862 CHL1O00533 1208 aa24.41■■□□□ 1.5
AC004540.1-203ENST00000421862 NLRP10Q86W26 655 aa24.41■■□□□ 1.5
AC004540.1-203ENST00000421862 VPS33BQ9H267 617 aa24.41■■□□□ 1.5
AC004540.1-203ENST00000421862 MAP1SQ66K74 1059 aaPredicted RBP24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 COPS6Q7L5N1 327 aa24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 XAGE3Q8WTP9 111 aa24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 RTFDC1Q9BY42 306 aaPredicted RBP24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 DDX21Q9NR30 783 aaKnown RBP eCLIP24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 TRIM35Q9UPQ4 493 aa24.4■■□□□ 1.5
AC004540.1-203ENST00000421862 CNTROBQ8N137 903 aa24.39■■□□□ 1.49
AC004540.1-203ENST00000421862 CLEC11AQ9Y240 323 aa24.39■■□□□ 1.49
AC004540.1-203ENST00000421862 COL4A1P02462 1669 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 RASSF10A6NK89 507 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 LMOD1P29536 600 aaPredicted RBP24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 KRT24Q2M2I5 525 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 NIM1KQ8IY84 436 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 CCDC146Q8IYE0 955 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 RUNDC1Q96C34 613 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 GJA3Q9Y6H8 435 aa24.38■■□□□ 1.49
AC004540.1-203ENST00000421862 PPIP5K2O43314 1243 aa24.37■■□□□ 1.49
AC004540.1-203ENST00000421862 HOXB7P09629 217 aa24.37■■□□□ 1.49
AC004540.1-203ENST00000421862 VEGFBP49765 207 aa24.37■■□□□ 1.49
AC004540.1-203ENST00000421862 TCIRG1Q13488 830 aa24.37■■□□□ 1.49
AC004540.1-203ENST00000421862 TCERG1O14776 1098 aaKnown RBP24.36■■□□□ 1.49
AC004540.1-203ENST00000421862 AOC3Q16853 763 aa24.36■■□□□ 1.49
AC004540.1-203ENST00000421862 NECTIN2Q92692 538 aa24.36■■□□□ 1.49
AC004540.1-203ENST00000421862 SH3TC1Q8TE82 1336 aa24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 FOXN1O15353 648 aa24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 EPS15P42566 896 aa24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 AIMP1Q12904 312 aaKnown RBP24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 CHPF2Q9P2E5 772 aa24.35■■□□□ 1.49
AC004540.1-203ENST00000421862 BBOX1O75936 387 aa24.34■■□□□ 1.49
AC004540.1-203ENST00000421862 USP50Q70EL3 339 aaPredicted RBP24.34■■□□□ 1.49
AC004540.1-203ENST00000421862 SP8Q8IXZ3 490 aa24.34■■□□□ 1.49
AC004540.1-203ENST00000421862 CDHR2Q9BYE9 1310 aa24.34■■□□□ 1.49
AC004540.1-203ENST00000421862 HCLS1P14317 486 aaPredicted RBP24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 GRAPQ13588 217 aa24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 NEUROD2Q15784 382 aa24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 TRMT112Q9UI30 125 aaKnown RBP24.33■■□□□ 1.49
AC004540.1-203ENST00000421862 KIAA2012Q0VF49 1180 aa24.32■■□□□ 1.48
AC004540.1-203ENST00000421862 WDR43Q15061 677 aaKnown RBP eCLIP24.32■■□□□ 1.48
AC004540.1-203ENST00000421862 HDGFL1Q5TGJ6 251 aa24.32■■□□□ 1.48
AC004540.1-203ENST00000421862 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
AC004540.1-203ENST00000421862 GPRC5DQ9NZD1 345 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms