RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 LRRC23Q53EV4 343 aaPredicted RBP7.41□□□□□ -1.22
SBNO1-202ENST00000420886 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 TRIM4Q9C037 500 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 JADE2Q9NQC1 790 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 ANKRD30BQ9BXX2 1392 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 KIF4AO95239 1232 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 SLMAPQ14BN4 828 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 RALYLQ86SE5 291 aaKnown RBP7.41□□□□□ -1.22
SBNO1-202ENST00000420886 F13A1P00488 732 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 CTAGE1Q96RT6 745 aa7.41□□□□□ -1.22
SBNO1-202ENST00000420886 YEATS4O95619 227 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 SLC3A2P08195 630 aaKnown RBP7.4□□□□□ -1.22
SBNO1-202ENST00000420886 TADA2BQ86TJ2 420 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 DZIP1Q86YF9 867 aaKnown RBP7.4□□□□□ -1.22
SBNO1-202ENST00000420886 TRIM27P14373 513 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 CPLX4Q7Z7G2 160 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 ARMC2Q8NEN0 867 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 CDC25BP30305 580 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.4□□□□□ -1.225e-7■■□□□ 13.8
SBNO1-202ENST00000420886 ANKRD50Q9ULJ7 1429 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 PCK1P35558 622 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 CCDC6Q16204 474 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
SBNO1-202ENST00000420886 MYH6P13533 1939 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 MRFAP1L1Q96HT8 127 aa7.4□□□□□ -1.22
SBNO1-202ENST00000420886 CDKL5O76039 1030 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 UBTFL1P0CB47 393 aaPredicted RBP7.4□□□□□ -1.23
SBNO1-202ENST00000420886 CCDC129Q6ZRS4 1044 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 FEZ2Q9UHY8 353 aaPredicted RBP7.4□□□□□ -1.23
SBNO1-202ENST00000420886 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.23
SBNO1-202ENST00000420886 NLRP5P59047 1200 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 SOX12O15370 315 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 TAF4BQ92750 862 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 PCDHB15Q9Y5E8 787 aa7.4□□□□□ -1.23
SBNO1-202ENST00000420886 SAMD15Q9P1V8 674 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 GOLGA6BA6NDN3 693 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 LRRC8AQ8IWT6 810 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 DONSONQ9NYP3 566 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 EIF3CLB5ME19 914 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 EIF3CQ99613 913 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 NBPF3Q9H094 633 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 DNAJC25Q9H1X3 360 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 MXRA7P84157 204 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 ZBTB17Q13105 803 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 NPHP3Q7Z494 1330 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 PPP1R12AO14974 1030 aaPredicted RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 G3BP1Q13283 466 aaKnown RBP eCLIP7.39□□□□□ -1.234e-6■■■■□ 21.1
SBNO1-202ENST00000420886 ZMAT2Q96NC0 199 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 LIG3P49916 1009 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 GPT2Q8TD30 523 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 ERICH2A1L162 156 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 SPECC1Q5M775 1068 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 NFXL1Q6ZNB6 911 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 WDHD1O75717 1129 aaPredicted RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 MAP7Q14244 749 aa7.39□□□□□ -1.23
SBNO1-202ENST00000420886 SART3Q15020 963 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 TSR2Q969E8 191 aaKnown RBP7.39□□□□□ -1.23
SBNO1-202ENST00000420886 SMIM24O75264 130 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 ANKRD7Q92527 254 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 ARHGEF12Q9NZN5 1544 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 GUCY2CP25092 1073 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 STK3Q13188 491 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 CACNA2D3Q8IZS8 1091 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 RABGGTAQ92696 567 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 TTC14Q96N46 770 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 TAOK3Q9H2K8 898 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 RPGRIP1LQ68CZ1 1315 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 KDM5CP41229 1560 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 LRRD1A4D1F6 860 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 RHOXF2BP0C7M4 288 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 PNMA6AP0CW24 399 aaPredicted RBP7.38□□□□□ -1.23
SBNO1-202ENST00000420886 MTHFSP49914 203 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 VAV2P52735 878 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 KIAA1524Q8TCG1 905 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 PDLIM2Q96JY6 352 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 RHOXF2Q9BQY4 288 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 CEP104O60308 925 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 HLTFQ14527 1009 aaKnown RBP eCLIP7.38□□□□□ -1.23
SBNO1-202ENST00000420886 KLHL10Q6JEL2 608 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 FSIP1Q8NA03 581 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 SAAL1Q96ER3 474 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 DACT1Q9NYF0 836 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 TTC41PQ6P2S7 1318 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 DAPK1P53355 1430 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 MYCNP04198 464 aaPredicted RBP7.38□□□□□ -1.23
SBNO1-202ENST00000420886 CCDC40Q4G0X9 1142 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.38□□□□□ -1.23
SBNO1-202ENST00000420886 PHLPP2Q6ZVD8 1323 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 CYP2C19P33261 490 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 IQCA1Q86XH1 822 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 CEP131Q9UPN4 1083 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 NESP48681 1621 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 TRIM7Q9C029 511 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 MAP3K9P80192 1104 aa7.38□□□□□ -1.23
SBNO1-202ENST00000420886 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms