RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 IQCA1LA6NCM1 817 aa22.73■■□□□ 1.23
MSH6-203ENST00000420813 PSMD1Q99460 953 aa22.73■■□□□ 1.23
MSH6-203ENST00000420813 LAMB2P55268 1798 aa22.72■■□□□ 1.23
MSH6-203ENST00000420813 CHL1O00533 1208 aa22.72■■□□□ 1.23
MSH6-203ENST00000420813 NEUROD2Q15784 382 aa22.72■■□□□ 1.23
MSH6-203ENST00000420813 PROSER3Q2NL68 480 aa22.72■■□□□ 1.23
MSH6-203ENST00000420813 IARSP41252 1262 aaKnown RBP22.71■■□□□ 1.23
MSH6-203ENST00000420813 GRIPAP1Q4V328 841 aa22.71■■□□□ 1.23
MSH6-203ENST00000420813 SYNE4Q8N205 404 aa22.71■■□□□ 1.23
MSH6-203ENST00000420813 CRAMP1Q96RY5 1269 aa22.71■■□□□ 1.23
MSH6-203ENST00000420813 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
MSH6-203ENST00000420813 RNF123Q5XPI4 1314 aa22.71■■□□□ 1.23
MSH6-203ENST00000420813 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
MSH6-203ENST00000420813 RBM17Q96I25 401 aaKnown RBP22.7■■□□□ 1.22
MSH6-203ENST00000420813 ZNF541Q9H0D2 1346 aa22.69■■□□□ 1.22
MSH6-203ENST00000420813 ANXA1P04083 346 aa22.69■■□□□ 1.22
MSH6-203ENST00000420813 HSP90AB3PQ58FF7 597 aa22.69■■□□□ 1.22
MSH6-203ENST00000420813 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
MSH6-203ENST00000420813 DDX21Q9NR30 783 aaKnown RBP eCLIP22.69■■□□□ 1.22
MSH6-203ENST00000420813 ADAMTS8Q9UP79 889 aa22.69■■□□□ 1.22
MSH6-203ENST00000420813 FZD9O00144 591 aa22.68■■□□□ 1.22
MSH6-203ENST00000420813 SLC10A5Q5PT55 438 aa22.68■■□□□ 1.22
MSH6-203ENST00000420813 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
MSH6-203ENST00000420813 NLRP3Q96P20 1036 aa22.68■■□□□ 1.22
MSH6-203ENST00000420813 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
MSH6-203ENST00000420813 HOXB7P09629 217 aa22.67■■□□□ 1.22
MSH6-203ENST00000420813 TAF1DQ9H5J8 278 aaPredicted RBP22.67■■□□□ 1.22
MSH6-203ENST00000420813 ADAMTSL1Q8N6G6 1762 aa22.66■■□□□ 1.22
MSH6-203ENST00000420813 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
MSH6-203ENST00000420813 XAGE3Q8WTP9 111 aa22.66■■□□□ 1.22
MSH6-203ENST00000420813 JDP2Q8WYK2 163 aa22.66■■□□□ 1.22
MSH6-203ENST00000420813 PPEF1O14829 653 aaPredicted RBP22.65■■□□□ 1.22
MSH6-203ENST00000420813 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
MSH6-203ENST00000420813 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
MSH6-203ENST00000420813 KRT24Q2M2I5 525 aa22.65■■□□□ 1.22
MSH6-203ENST00000420813 C3orf67Q6ZVT6 689 aa22.65■■□□□ 1.22
MSH6-203ENST00000420813 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
MSH6-203ENST00000420813 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
MSH6-203ENST00000420813 AIMP1Q12904 312 aaKnown RBP22.64■■□□□ 1.21
MSH6-203ENST00000420813 TCIRG1Q13488 830 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 NLRP10Q86W26 655 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 GPC2Q8N158 579 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 CFAP44Q96MT7 982 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 HACL1Q9UJ83 578 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 COL4A5P29400 1685 aa22.64■■□□□ 1.21
MSH6-203ENST00000420813 PCNTO95613 3336 aa22.63■■□□□ 1.21
MSH6-203ENST00000420813 CHPF2Q9P2E5 772 aa22.63■■□□□ 1.21
MSH6-203ENST00000420813 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
MSH6-203ENST00000420813 CREBZFQ9NS37 354 aa22.62■■□□□ 1.21
MSH6-203ENST00000420813 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
MSH6-203ENST00000420813 TMX4Q9H1E5 349 aaPredicted RBP22.61■■□□□ 1.21
MSH6-203ENST00000420813 DBF4Q9UBU7 674 aaPredicted RBP22.61■■□□□ 1.21
MSH6-203ENST00000420813 ATP6V0A2Q9Y487 856 aa22.61■■□□□ 1.21
MSH6-203ENST00000420813 ABCC4O15439 1325 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 SH3TC1Q8TE82 1336 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 PASKQ96RG2 1323 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 EPHX2P34913 555 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 EIF6P56537 245 aaKnown RBP22.6■■□□□ 1.21
MSH6-203ENST00000420813 PNMA8AQ86V59 439 aaPredicted RBP22.6■■□□□ 1.21
MSH6-203ENST00000420813 LARGE2Q8N3Y3 721 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 VPS33BQ9H267 617 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 TAF1P21675 1872 aa22.6■■□□□ 1.21
MSH6-203ENST00000420813 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
MSH6-203ENST00000420813 TRMT112Q9UI30 125 aaKnown RBP22.59■■□□□ 1.21
MSH6-203ENST00000420813 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
MSH6-203ENST00000420813 BBOX1O75936 387 aa22.58■■□□□ 1.21
MSH6-203ENST00000420813 EAPPQ56P03 285 aaPredicted RBP22.58■■□□□ 1.21
MSH6-203ENST00000420813 MBIPQ9NS73 344 aa22.58■■□□□ 1.21
MSH6-203ENST00000420813 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 LTBP1Q14766 1721 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 ZNF853P0CG23 659 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 HCLS1P14317 486 aaPredicted RBP22.57■■□□□ 1.2
MSH6-203ENST00000420813 DUSP27Q5VZP5 1158 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 ANKRD13DQ6ZTN6 518 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 SLC51AQ86UW1 340 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 HYPKQ9NX55 129 aa22.57■■□□□ 1.2
MSH6-203ENST00000420813 ITGBL1O95965 494 aaPredicted RBP22.56■■□□□ 1.2
MSH6-203ENST00000420813 CALD1Q05682 793 aaKnown RBP22.56■■□□□ 1.2
MSH6-203ENST00000420813 SP8Q8IXZ3 490 aa22.56■■□□□ 1.2
MSH6-203ENST00000420813 NIM1KQ8IY84 436 aa22.56■■□□□ 1.2
MSH6-203ENST00000420813 SUPT20HQ8NEM7 779 aa22.56■■□□□ 1.2
MSH6-203ENST00000420813 RTFDC1Q9BY42 306 aaPredicted RBP22.56■■□□□ 1.2
MSH6-203ENST00000420813 IFT57Q9NWB7 429 aa22.56■■□□□ 1.2
MSH6-203ENST00000420813 APAF1O14727 1248 aa22.55■■□□□ 1.2
MSH6-203ENST00000420813 PPIP5K2O43314 1243 aa22.55■■□□□ 1.2
MSH6-203ENST00000420813 DDX46Q7L014 1031 aaKnown RBP22.55■■□□□ 1.2
MSH6-203ENST00000420813 ISCA1Q9BUE6 129 aa22.55■■□□□ 1.2
MSH6-203ENST00000420813 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
MSH6-203ENST00000420813 GJA3Q9Y6H8 435 aa22.55■■□□□ 1.2
MSH6-203ENST00000420813 LMOD1P29536 600 aaPredicted RBP22.54■■□□□ 1.2
MSH6-203ENST00000420813 GNAI1P63096 354 aa22.54■■□□□ 1.2
MSH6-203ENST00000420813 GRAPQ13588 217 aa22.54■■□□□ 1.2
MSH6-203ENST00000420813 GRAPLQ8TC17 118 aaPredicted RBP22.54■■□□□ 1.2
MSH6-203ENST00000420813 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
MSH6-203ENST00000420813 SCNN1DP51172 638 aa22.52■■□□□ 1.2
MSH6-203ENST00000420813 AOC3Q16853 763 aa22.52■■□□□ 1.2
MSH6-203ENST00000420813 DPP8Q6V1X1 898 aaPredicted RBP22.52■■□□□ 1.2
MSH6-203ENST00000420813 CNTNAP1P78357 1384 aa22.51■■□□□ 1.19
MSH6-203ENST00000420813 TMEM88BA6NKF7 163 aa22.51■■□□□ 1.19
MSH6-203ENST00000420813 HSPA1AP0DMV8 641 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms