RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 TAF1DQ9H5J8 278 aaPredicted RBP16.89■□□□□ 0.29
PRAME-207ENST00000420709 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
PRAME-207ENST00000420709 PDIA6Q15084 440 aa16.88■□□□□ 0.29
PRAME-207ENST00000420709 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
PRAME-207ENST00000420709 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
PRAME-207ENST00000420709 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
PRAME-207ENST00000420709 ERBB4Q15303 1308 aa16.88■□□□□ 0.29
PRAME-207ENST00000420709 COL4A5P29400 1685 aa16.88■□□□□ 0.29
PRAME-207ENST00000420709 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
PRAME-207ENST00000420709 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
PRAME-207ENST00000420709 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
PRAME-207ENST00000420709 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
PRAME-207ENST00000420709 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
PRAME-207ENST00000420709 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
PRAME-207ENST00000420709 FZD9O00144 591 aa16.86■□□□□ 0.29
PRAME-207ENST00000420709 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
PRAME-207ENST00000420709 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
PRAME-207ENST00000420709 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
PRAME-207ENST00000420709 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
PRAME-207ENST00000420709 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
PRAME-207ENST00000420709 PSMD1Q99460 953 aa16.86■□□□□ 0.29
PRAME-207ENST00000420709 HACL1Q9UJ83 578 aa16.86■□□□□ 0.29
PRAME-207ENST00000420709 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
PRAME-207ENST00000420709 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
PRAME-207ENST00000420709 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
PRAME-207ENST00000420709 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
PRAME-207ENST00000420709 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
PRAME-207ENST00000420709 LAS1LQ9Y4W2 734 aaKnown RBP16.85■□□□□ 0.29
PRAME-207ENST00000420709 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
PRAME-207ENST00000420709 EPHX2P34913 555 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 JDP2Q8WYK2 163 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
PRAME-207ENST00000420709 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 PASKQ96RG2 1323 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
PRAME-207ENST00000420709 CC2D2BQ6DHV5 1058 aa16.83■□□□□ 0.28
PRAME-207ENST00000420709 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
PRAME-207ENST00000420709 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
PRAME-207ENST00000420709 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PRAME-207ENST00000420709 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
PRAME-207ENST00000420709 LAMB2P55268 1798 aa16.82■□□□□ 0.28
PRAME-207ENST00000420709 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
PRAME-207ENST00000420709 GPC2Q8N158 579 aa16.82■□□□□ 0.28
PRAME-207ENST00000420709 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
PRAME-207ENST00000420709 NLRP3Q96P20 1036 aa16.82■□□□□ 0.28
PRAME-207ENST00000420709 LTBP1Q14766 1721 aa16.82■□□□□ 0.28
PRAME-207ENST00000420709 ABCC4O15439 1325 aa16.81■□□□□ 0.28
PRAME-207ENST00000420709 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
PRAME-207ENST00000420709 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.288e-17■□□□□ 8.1
PRAME-207ENST00000420709 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
PRAME-207ENST00000420709 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
PRAME-207ENST00000420709 CNTNAP1P78357 1384 aa16.8■□□□□ 0.28
PRAME-207ENST00000420709 CAPN15O75808 1086 aa16.8■□□□□ 0.28
PRAME-207ENST00000420709 ITGBL1O95965 494 aaPredicted RBP16.8■□□□□ 0.28
PRAME-207ENST00000420709 NLRP10Q86W26 655 aa16.8■□□□□ 0.28
PRAME-207ENST00000420709 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
PRAME-207ENST00000420709 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
PRAME-207ENST00000420709 CHL1O00533 1208 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 AOC3Q16853 763 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 PNMA8AQ86V59 439 aaPredicted RBP16.79■□□□□ 0.28
PRAME-207ENST00000420709 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRAME-207ENST00000420709 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
PRAME-207ENST00000420709 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 EPS15P42566 896 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 HSP90AB3PQ58FF7 597 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 NIM1KQ8IY84 436 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 TRMT112Q9UI30 125 aaKnown RBP16.78■□□□□ 0.28
PRAME-207ENST00000420709 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
PRAME-207ENST00000420709 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
PRAME-207ENST00000420709 SCNN1DP51172 638 aa16.77■□□□□ 0.28
PRAME-207ENST00000420709 GRIPAP1Q4V328 841 aa16.77■□□□□ 0.28
PRAME-207ENST00000420709 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
PRAME-207ENST00000420709 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
PRAME-207ENST00000420709 TAF1P21675 1872 aa16.77■□□□□ 0.27
PRAME-207ENST00000420709 VEGFBP49765 207 aa16.76■□□□□ 0.27
PRAME-207ENST00000420709 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.274e-26■□□□□ 9.3
PRAME-207ENST00000420709 SH3TC1Q8TE82 1336 aa16.74■□□□□ 0.27
PRAME-207ENST00000420709 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
PRAME-207ENST00000420709 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
PRAME-207ENST00000420709 FOXN1O15353 648 aa16.74■□□□□ 0.27
PRAME-207ENST00000420709 DPP8Q6V1X1 898 aaPredicted RBP16.74■□□□□ 0.27
PRAME-207ENST00000420709 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
PRAME-207ENST00000420709 BBOX1O75936 387 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 GRAPQ13588 217 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 DUSP27Q5VZP5 1158 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 MPNDQ8N594 471 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 GRAPLQ8TC17 118 aaPredicted RBP16.73■□□□□ 0.27
PRAME-207ENST00000420709 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
PRAME-207ENST00000420709 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
PRAME-207ENST00000420709 CXCL9Q07325 125 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms