RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FAM196AQ6ZSG2 479 aa25.88■■□□□ 1.73
GPC1-202ENST00000420138 RREB1Q92766 1687 aa25.88■■□□□ 1.73
GPC1-202ENST00000420138 LY75O60449 1722 aa25.88■■□□□ 1.73
GPC1-202ENST00000420138 FOXO4P98177 505 aa25.88■■□□□ 1.73
GPC1-202ENST00000420138 RFX5P48382 616 aaPredicted RBP25.87■■□□□ 1.73
GPC1-202ENST00000420138 STAP2Q9UGK3 403 aa25.87■■□□□ 1.73
GPC1-202ENST00000420138 EP400Q96L91 3159 aa25.85■■□□□ 1.73
GPC1-202ENST00000420138 ERVV-1B6SEH8 477 aa25.85■■□□□ 1.73
GPC1-202ENST00000420138 MX1P20591 662 aa25.85■■□□□ 1.73
GPC1-202ENST00000420138 TSHZ3Q63HK5 1081 aa25.84■■□□□ 1.73
GPC1-202ENST00000420138 DZIP3Q86Y13 1208 aaKnown RBP25.84■■□□□ 1.73
GPC1-202ENST00000420138 BCL11BQ9C0K0 894 aaPredicted RBP25.84■■□□□ 1.73
GPC1-202ENST00000420138 RTL5Q5HYW3 569 aaPredicted RBP25.84■■□□□ 1.73
GPC1-202ENST00000420138 POTEAQ6S8J7 498 aa25.84■■□□□ 1.73
GPC1-202ENST00000420138 KLHDC4Q8TBB5 520 aa25.84■■□□□ 1.73
GPC1-202ENST00000420138 ARXQ96QS3 562 aa25.84■■□□□ 1.73
GPC1-202ENST00000420138 TBC1D2BQ9UPU7 963 aa25.84■■□□□ 1.73
GPC1-202ENST00000420138 MYH14Q7Z406 1995 aaKnown RBP25.83■■□□□ 1.73
GPC1-202ENST00000420138 SASH1O94885 1247 aa25.83■■□□□ 1.73
GPC1-202ENST00000420138 SDSP20132 328 aa25.83■■□□□ 1.73
GPC1-202ENST00000420138 TBC1D9Q6ZT07 1266 aa25.83■■□□□ 1.73
GPC1-202ENST00000420138 COPRSQ9NQ92 184 aa25.83■■□□□ 1.73
GPC1-202ENST00000420138 PTPN12Q05209 780 aaKnown RBP25.82■■□□□ 1.72
GPC1-202ENST00000420138 NUTM1Q86Y26 1132 aa25.82■■□□□ 1.72
GPC1-202ENST00000420138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.82■■□□□ 1.72
GPC1-202ENST00000420138 LMBR1LQ6UX01 489 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 NLRP10Q86W26 655 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 ERC1Q8IUD2 1116 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 LINC00116Q8NCU8 138 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 DDRGK1Q96HY6 314 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 OS9Q13438 667 aaPredicted RBP25.81■■□□□ 1.72
GPC1-202ENST00000420138 HSP90AB3PQ58FF7 597 aa25.81■■□□□ 1.72
GPC1-202ENST00000420138 PCCAP05165 728 aaPredicted RBP25.8■■□□□ 1.72
GPC1-202ENST00000420138 TBC1D32Q96NH3 1257 aa25.8■■□□□ 1.72
GPC1-202ENST00000420138 AOX1Q06278 1338 aa25.79■■□□□ 1.72
GPC1-202ENST00000420138 CDC45O75419 566 aa25.79■■□□□ 1.72
GPC1-202ENST00000420138 KCNQ4P56696 695 aa25.79■■□□□ 1.72
GPC1-202ENST00000420138 GPTP24298 496 aa25.79■■□□□ 1.72
GPC1-202ENST00000420138 G3BP1Q13283 466 aaKnown RBP eCLIP25.79■■□□□ 1.72
GPC1-202ENST00000420138 ZBTB38Q8NAP3 1195 aaPredicted RBP25.79■■□□□ 1.72
GPC1-202ENST00000420138 TRIM37O94972 964 aa25.78■■□□□ 1.72
GPC1-202ENST00000420138 MFAP1P55081 439 aaKnown RBP25.78■■□□□ 1.72
GPC1-202ENST00000420138 ZNF34Q8IZ26 560 aa25.78■■□□□ 1.72
GPC1-202ENST00000420138 SIL1Q9H173 461 aa25.78■■□□□ 1.72
GPC1-202ENST00000420138 USP42Q9H9J4 1324 aaKnown RBP25.77■■□□□ 1.72
GPC1-202ENST00000420138 CAMTA2O94983 1202 aa25.77■■□□□ 1.72
GPC1-202ENST00000420138 PI4K2BQ8TCG2 481 aa25.77■■□□□ 1.72
GPC1-202ENST00000420138 FAM89AQ96GI7 184 aa25.77■■□□□ 1.72
GPC1-202ENST00000420138 UBN2Q6ZU65 1347 aa25.77■■□□□ 1.72
GPC1-202ENST00000420138 CLASRPQ8N2M8 674 aaKnown RBP25.77■■□□□ 1.72
GPC1-202ENST00000420138 PLA2G12BQ9BX93 195 aa25.77■■□□□ 1.72
GPC1-202ENST00000420138 UPF2Q9HAU5 1272 aaKnown RBP25.77■■□□□ 1.72
GPC1-202ENST00000420138 CCNL1Q9UK58 526 aaPredicted RBP25.76■■□□□ 1.71
GPC1-202ENST00000420138 CNTNAP4Q9C0A0 1308 aa25.75■■□□□ 1.71
GPC1-202ENST00000420138 CDHR2Q9BYE9 1310 aa25.75■■□□□ 1.71
GPC1-202ENST00000420138 SYNE4Q8N205 404 aa25.74■■□□□ 1.71
GPC1-202ENST00000420138 ANKRD36CQ5JPF3 1778 aa25.74■■□□□ 1.71
GPC1-202ENST00000420138 NUP98P52948 1817 aa25.74■■□□□ 1.71
GPC1-202ENST00000420138 EAF2Q96CJ1 260 aaPredicted RBP25.74■■□□□ 1.71
GPC1-202ENST00000420138 TUBGCP6Q96RT7 1819 aa25.74■■□□□ 1.71
GPC1-202ENST00000420138 CSF1RP07333 972 aa25.72■■□□□ 1.71
GPC1-202ENST00000420138 C22orf23Q9BZE7 217 aa25.72■■□□□ 1.71
GPC1-202ENST00000420138 RC3H1Q5TC82 1133 aaKnown RBP25.71■■□□□ 1.71
GPC1-202ENST00000420138 TTC41PQ6P2S7 1318 aa25.71■■□□□ 1.71
GPC1-202ENST00000420138 AACSQ86V21 672 aa25.7■■□□□ 1.71
GPC1-202ENST00000420138 CHMP3Q9Y3E7 222 aa25.7■■□□□ 1.71
GPC1-202ENST00000420138 C4BP0C0L5 1744 aa25.7■■□□□ 1.7
GPC1-202ENST00000420138 ATG9AQ7Z3C6 839 aa25.7■■□□□ 1.7
GPC1-202ENST00000420138 TRMT112Q9UI30 125 aaKnown RBP25.69■■□□□ 1.7
GPC1-202ENST00000420138 IFIT2P09913 472 aaKnown RBP25.68■■□□□ 1.7
GPC1-202ENST00000420138 TFCP2Q12800 502 aa25.68■■□□□ 1.7
GPC1-202ENST00000420138 SUSD4Q5VX71 490 aa25.68■■□□□ 1.7
GPC1-202ENST00000420138 TLR7Q9NYK1 1049 aaKnown RBP25.68■■□□□ 1.7
GPC1-202ENST00000420138 RBM25P49756 843 aaKnown RBP25.67■■□□□ 1.7
GPC1-202ENST00000420138 ECHDC1Q9NTX5 307 aa25.67■■□□□ 1.7
GPC1-202ENST00000420138 TNS1Q9HBL0 1735 aaKnown RBP25.67■■□□□ 1.7
GPC1-202ENST00000420138 SMIM5Q71RC9 77 aa25.67■■□□□ 1.7
GPC1-202ENST00000420138 ZNF594Q96JF6 807 aaPredicted RBP25.67■■□□□ 1.7
GPC1-202ENST00000420138 CCDC8Q9H0W5 538 aaPredicted RBP25.67■■□□□ 1.7
GPC1-202ENST00000420138 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
GPC1-202ENST00000420138 IRS4O14654 1257 aaPredicted RBP25.66■■□□□ 1.7
GPC1-202ENST00000420138 RPS6KA4O75676 772 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 TTLL11Q8NHH1 800 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 TRIM6-TRIM34B2RNG4 842 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 GLRX3O76003 335 aaKnown RBP25.65■■□□□ 1.7
GPC1-202ENST00000420138 LRRC24Q50LG9 513 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 TNNI3KQ59H18 835 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 FPGT-TNNI3KV9GXZ4 949 aa25.65■■□□□ 1.7
GPC1-202ENST00000420138 EYA2O00167 538 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 CIAO1O76071 339 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 PARP10Q53GL7 1025 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 CLEC4GQ6UXB4 293 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
GPC1-202ENST00000420138 CTSWP56202 376 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 CCDC57Q2TAC2 916 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 AMIGO3Q86WK7 504 aa25.63■■□□□ 1.69
GPC1-202ENST00000420138 PUS3Q9BZE2 481 aaKnown RBP25.63■■□□□ 1.69
GPC1-202ENST00000420138 LRRC4BQ9NT99 713 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms