RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
LINC01006-202ENST00000418309 PROSER3Q2NL68 480 aa18.48■□□□□ 0.55
LINC01006-202ENST00000418309 CRY2Q49AN0 593 aa18.48■□□□□ 0.55
LINC01006-202ENST00000418309 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
LINC01006-202ENST00000418309 KLRG1Q96E93 195 aa18.48■□□□□ 0.55
LINC01006-202ENST00000418309 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
LINC01006-202ENST00000418309 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
LINC01006-202ENST00000418309 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
LINC01006-202ENST00000418309 NTSR2O95665 410 aa18.46■□□□□ 0.55
LINC01006-202ENST00000418309 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
LINC01006-202ENST00000418309 TRIM35Q9UPQ4 493 aa18.46■□□□□ 0.55
LINC01006-202ENST00000418309 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
LINC01006-202ENST00000418309 CHL1O00533 1208 aa18.45■□□□□ 0.54
LINC01006-202ENST00000418309 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
LINC01006-202ENST00000418309 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
LINC01006-202ENST00000418309 KRT24Q2M2I5 525 aa18.45■□□□□ 0.54
LINC01006-202ENST00000418309 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
LINC01006-202ENST00000418309 XAGE3Q8WTP9 111 aa18.45■□□□□ 0.54
LINC01006-202ENST00000418309 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
LINC01006-202ENST00000418309 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
LINC01006-202ENST00000418309 IQCA1LA6NCM1 817 aa18.44■□□□□ 0.54
LINC01006-202ENST00000418309 HOXA10P31260 410 aaPredicted RBP18.44■□□□□ 0.54
LINC01006-202ENST00000418309 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
LINC01006-202ENST00000418309 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
LINC01006-202ENST00000418309 HSP90AB3PQ58FF7 597 aa18.43■□□□□ 0.54
LINC01006-202ENST00000418309 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
LINC01006-202ENST00000418309 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
LINC01006-202ENST00000418309 JDP2Q8WYK2 163 aa18.43■□□□□ 0.54
LINC01006-202ENST00000418309 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
LINC01006-202ENST00000418309 TMX4Q9H1E5 349 aaPredicted RBP18.43■□□□□ 0.54
LINC01006-202ENST00000418309 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
LINC01006-202ENST00000418309 PPEF1O14829 653 aaPredicted RBP18.42■□□□□ 0.54
LINC01006-202ENST00000418309 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
LINC01006-202ENST00000418309 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
LINC01006-202ENST00000418309 C3orf67Q6ZVT6 689 aa18.42■□□□□ 0.54
LINC01006-202ENST00000418309 PSMD1Q99460 953 aa18.42■□□□□ 0.54
LINC01006-202ENST00000418309 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
LINC01006-202ENST00000418309 RIC1Q4ADV7 1423 aa18.41■□□□□ 0.54
LINC01006-202ENST00000418309 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
LINC01006-202ENST00000418309 CHPF2Q9P2E5 772 aa18.41■□□□□ 0.54
LINC01006-202ENST00000418309 FZD9O00144 591 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 GRIPAP1Q4V328 841 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
LINC01006-202ENST00000418309 SLC10A5Q5PT55 438 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 JMYQ8N9B5 988 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
LINC01006-202ENST00000418309 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
LINC01006-202ENST00000418309 SCN4AP35499 1836 aa18.39■□□□□ 0.54
LINC01006-202ENST00000418309 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
LINC01006-202ENST00000418309 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
LINC01006-202ENST00000418309 LARGE2Q8N3Y3 721 aa18.39■□□□□ 0.53
LINC01006-202ENST00000418309 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
LINC01006-202ENST00000418309 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.53
LINC01006-202ENST00000418309 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
LINC01006-202ENST00000418309 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
LINC01006-202ENST00000418309 LDHDQ86WU2 507 aa18.38■□□□□ 0.53
LINC01006-202ENST00000418309 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
LINC01006-202ENST00000418309 GJA3Q9Y6H8 435 aa18.38■□□□□ 0.53
LINC01006-202ENST00000418309 APAF1O14727 1248 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 HOXB7P09629 217 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 EPHX2P34913 555 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 SLC51AQ86UW1 340 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 GPC2Q8N158 579 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
LINC01006-202ENST00000418309 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 ANKRD36CQ5JPF3 1778 aa18.37■□□□□ 0.53
LINC01006-202ENST00000418309 PLBD2Q8NHP8 589 aa18.36■□□□□ 0.53
LINC01006-202ENST00000418309 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
LINC01006-202ENST00000418309 SNED1Q8TER0 1413 aa18.36■□□□□ 0.53
LINC01006-202ENST00000418309 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
LINC01006-202ENST00000418309 ATP6V0A2Q9Y487 856 aa18.36■□□□□ 0.53
LINC01006-202ENST00000418309 ABCC4O15439 1325 aa18.35■□□□□ 0.53
LINC01006-202ENST00000418309 BBOX1O75936 387 aa18.35■□□□□ 0.53
LINC01006-202ENST00000418309 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
LINC01006-202ENST00000418309 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
LINC01006-202ENST00000418309 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
LINC01006-202ENST00000418309 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
LINC01006-202ENST00000418309 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
LINC01006-202ENST00000418309 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
LINC01006-202ENST00000418309 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
LINC01006-202ENST00000418309 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
LINC01006-202ENST00000418309 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
LINC01006-202ENST00000418309 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
LINC01006-202ENST00000418309 GNAI1P63096 354 aa18.33■□□□□ 0.52
LINC01006-202ENST00000418309 SUPT20HQ8NEM7 779 aa18.33■□□□□ 0.52
LINC01006-202ENST00000418309 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
LINC01006-202ENST00000418309 AOC3Q16853 763 aa18.32■□□□□ 0.52
LINC01006-202ENST00000418309 DPP8Q6V1X1 898 aaPredicted RBP18.32■□□□□ 0.52
LINC01006-202ENST00000418309 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
LINC01006-202ENST00000418309 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
LINC01006-202ENST00000418309 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
LINC01006-202ENST00000418309 LAMB2P55268 1798 aa18.32■□□□□ 0.52
LINC01006-202ENST00000418309 COL4A5P29400 1685 aa18.31■□□□□ 0.52
LINC01006-202ENST00000418309 GRAPQ13588 217 aa18.31■□□□□ 0.52
LINC01006-202ENST00000418309 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
LINC01006-202ENST00000418309 MPNDQ8N594 471 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms