RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
SNHG17-203ENST00000417578 ARHGAP27Q6ZUM4 889 aa20.75■□□□□ 0.91
SNHG17-203ENST00000417578 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
SNHG17-203ENST00000417578 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
SNHG17-203ENST00000417578 NPR1P16066 1061 aa20.74■□□□□ 0.91
SNHG17-203ENST00000417578 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
SNHG17-203ENST00000417578 ISCA1Q9BUE6 129 aa20.74■□□□□ 0.91
SNHG17-203ENST00000417578 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
SNHG17-203ENST00000417578 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
SNHG17-203ENST00000417578 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
SNHG17-203ENST00000417578 SLC10A5Q5PT55 438 aa20.73■□□□□ 0.91
SNHG17-203ENST00000417578 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
SNHG17-203ENST00000417578 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
SNHG17-203ENST00000417578 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
SNHG17-203ENST00000417578 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
SNHG17-203ENST00000417578 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
SNHG17-203ENST00000417578 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
SNHG17-203ENST00000417578 METTL22Q9BUU2 404 aaPredicted RBP20.71■□□□□ 0.91
SNHG17-203ENST00000417578 SH3TC1Q8TE82 1336 aa20.71■□□□□ 0.91
SNHG17-203ENST00000417578 PI4KAP2A4QPH2 592 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 FLIIQ13045 1269 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 CRY2Q49AN0 593 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 G2E3Q7L622 706 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 PI4KAP1Q8N8J0 262 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 MYD88Q99836 296 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 MAP3K2Q9Y2U5 619 aa20.7■□□□□ 0.9
SNHG17-203ENST00000417578 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
SNHG17-203ENST00000417578 CACNA1SQ13698 1873 aa20.69■□□□□ 0.9
SNHG17-203ENST00000417578 TNRC6CQ9HCJ0 1690 aaKnown RBP20.68■□□□□ 0.9
SNHG17-203ENST00000417578 NEXNQ0ZGT2 675 aa20.68■□□□□ 0.9
SNHG17-203ENST00000417578 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
SNHG17-203ENST00000417578 PRPF40BQ6NWY9 871 aaKnown RBP20.68■□□□□ 0.9
SNHG17-203ENST00000417578 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
SNHG17-203ENST00000417578 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
SNHG17-203ENST00000417578 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
SNHG17-203ENST00000417578 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
SNHG17-203ENST00000417578 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
SNHG17-203ENST00000417578 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
SNHG17-203ENST00000417578 ZNF428Q96B54 188 aa20.67■□□□□ 0.9
SNHG17-203ENST00000417578 RBM17Q96I25 401 aaKnown RBP20.67■□□□□ 0.9
SNHG17-203ENST00000417578 C21orf2O43822 256 aa20.66■□□□□ 0.9
SNHG17-203ENST00000417578 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
SNHG17-203ENST00000417578 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
SNHG17-203ENST00000417578 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
SNHG17-203ENST00000417578 ADCY9O60503 1353 aa20.65■□□□□ 0.9
SNHG17-203ENST00000417578 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
SNHG17-203ENST00000417578 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
SNHG17-203ENST00000417578 ZNF219Q9P2Y4 722 aaPredicted RBP20.65■□□□□ 0.9
SNHG17-203ENST00000417578 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNHG17-203ENST00000417578 SYNE4Q8N205 404 aa20.64■□□□□ 0.89
SNHG17-203ENST00000417578 ZBTB38Q8NAP3 1195 aaPredicted RBP20.64■□□□□ 0.89
SNHG17-203ENST00000417578 SBF1O95248 1867 aa20.63■□□□□ 0.89
SNHG17-203ENST00000417578 CT47B1P0C2W7 299 aaPredicted RBP20.63■□□□□ 0.89
SNHG17-203ENST00000417578 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
SNHG17-203ENST00000417578 PCCAP05165 728 aaPredicted RBP20.62■□□□□ 0.89
SNHG17-203ENST00000417578 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
SNHG17-203ENST00000417578 ZNF784Q8NCA9 323 aaPredicted RBP20.62■□□□□ 0.89
SNHG17-203ENST00000417578 C7orf43Q8WVR3 580 aa20.62■□□□□ 0.89
SNHG17-203ENST00000417578 LAMB2P55268 1798 aa20.62■□□□□ 0.89
SNHG17-203ENST00000417578 FER1L6Q2WGJ9 1857 aa20.61■□□□□ 0.89
SNHG17-203ENST00000417578 IRS4O14654 1257 aaPredicted RBP20.61■□□□□ 0.89
SNHG17-203ENST00000417578 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
SNHG17-203ENST00000417578 CCDC93Q567U6 631 aa20.61■□□□□ 0.89
SNHG17-203ENST00000417578 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
SNHG17-203ENST00000417578 C9orf131Q5VYM1 1079 aa20.61■□□□□ 0.89
SNHG17-203ENST00000417578 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
SNHG17-203ENST00000417578 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
SNHG17-203ENST00000417578 NEURL1BA8MQ27 555 aa20.6■□□□□ 0.89
SNHG17-203ENST00000417578 LMNB1P20700 586 aa20.6■□□□□ 0.89
SNHG17-203ENST00000417578 SF3B3Q15393 1217 aaKnown RBP20.6■□□□□ 0.89
SNHG17-203ENST00000417578 ALDH1L2Q3SY69 923 aa20.6■□□□□ 0.89
SNHG17-203ENST00000417578 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
SNHG17-203ENST00000417578 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
SNHG17-203ENST00000417578 CCDC88AQ3V6T2 1871 aa20.6■□□□□ 0.89
SNHG17-203ENST00000417578 LTBP3Q9NS15 1303 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 NFKBIEO00221 500 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 RASSF7Q02833 373 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 RTKN2Q8IZC4 609 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 MRPL50Q8N5N7 158 aaKnown RBP20.59■□□□□ 0.89
SNHG17-203ENST00000417578 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 TAOK3Q9H2K8 898 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
SNHG17-203ENST00000417578 BBOX1O75936 387 aa20.58■□□□□ 0.89
SNHG17-203ENST00000417578 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
SNHG17-203ENST00000417578 ABCC4O15439 1325 aa20.57■□□□□ 0.88
SNHG17-203ENST00000417578 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
SNHG17-203ENST00000417578 PPEF1O14829 653 aaPredicted RBP20.57■□□□□ 0.88
SNHG17-203ENST00000417578 PDE8AO60658 829 aa20.57■□□□□ 0.88
SNHG17-203ENST00000417578 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
SNHG17-203ENST00000417578 GRAPQ13588 217 aa20.56■□□□□ 0.88
SNHG17-203ENST00000417578 GCKRQ14397 625 aa20.56■□□□□ 0.88
SNHG17-203ENST00000417578 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
SNHG17-203ENST00000417578 PTPRCP08575 1304 aa20.55■□□□□ 0.88
SNHG17-203ENST00000417578 F6X3S4 739 aa20.55■□□□□ 0.88
SNHG17-203ENST00000417578 H7C1W4 665 aa20.55■□□□□ 0.88
SNHG17-203ENST00000417578 TMC4Q7Z404 712 aa20.55■□□□□ 0.88
SNHG17-203ENST00000417578 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
SNHG17-203ENST00000417578 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNHG17-203ENST00000417578 BEND3Q5T5X7 828 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms