RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
ABCA13-202ENST00000417403 LTBP1Q14766 1721 aa8.44□□□□□ -1.06
ABCA13-202ENST00000417403 OTUD7AQ8TE49 926 aaPredicted RBP8.44□□□□□ -1.06
ABCA13-202ENST00000417403 AKAP11Q9UKA4 1901 aa8.44□□□□□ -1.06
ABCA13-202ENST00000417403 KCNQ4P56696 695 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 CAMTA2O94983 1202 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 CRKLP46109 303 aaKnown RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 BACH2Q9BYV9 841 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 RWDD1Q9H446 243 aaPredicted RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 CNTNAP4Q9C0A0 1308 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 GSPT1P15170 499 aaKnown RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 AIMP1Q12904 312 aaKnown RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 POTEAQ6S8J7 498 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 C16orf71Q8IYS4 520 aaPredicted RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 NOP58Q9Y2X3 529 aaKnown RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
ABCA13-202ENST00000417403 MAP3K15Q6ZN16 1313 aa8.43□□□□□ -1.06
ABCA13-202ENST00000417403 GRM8O00222 908 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 GNAI2P04899 355 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 SMIM5Q71RC9 77 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 CHD1LQ86WJ1 897 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 GCC1Q96CN9 775 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 MYO5AQ9Y4I1 1855 aaKnown RBP8.42□□□□□ -1.06
ABCA13-202ENST00000417403 SEC24BO95487 1268 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 IL6STP40189 918 aaPredicted RBP8.42□□□□□ -1.06
ABCA13-202ENST00000417403 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 BICC1Q9H694 974 aaKnown RBP8.42□□□□□ -1.06
ABCA13-202ENST00000417403 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 MYD88Q99836 296 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 LRRC37AA6NMS7 1700 aa8.42□□□□□ -1.06
ABCA13-202ENST00000417403 SYNE4Q8N205 404 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 FBXO41Q8TF61 875 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 TEX13AQ9BXU3 409 aaPredicted RBP8.41□□□□□ -1.06
ABCA13-202ENST00000417403 COL11A2P13942 1736 aaPredicted RBP8.41□□□□□ -1.06
ABCA13-202ENST00000417403 DOCK2Q92608 1830 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 GIGYF2Q6Y7W6 1299 aaKnown RBP8.41□□□□□ -1.06
ABCA13-202ENST00000417403 PPP1R42Q7Z4L9 355 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 GNAI3P08754 354 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 TCIRG1Q13488 830 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
ABCA13-202ENST00000417403 KIAA1551Q9HCM1 1747 aa8.41□□□□□ -1.06
ABCA13-202ENST00000417403 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.06
ABCA13-202ENST00000417403 OSBPL3Q9H4L5 887 aa8.4□□□□□ -1.06
ABCA13-202ENST00000417403 ERVV-1B6SEH8 477 aa8.4□□□□□ -1.06
ABCA13-202ENST00000417403 SASH1O94885 1247 aa8.4□□□□□ -1.06
ABCA13-202ENST00000417403 JARID2Q92833 1246 aaPredicted RBP8.4□□□□□ -1.06
ABCA13-202ENST00000417403 PLA2G12BQ9BX93 195 aa8.4□□□□□ -1.06
ABCA13-202ENST00000417403 USP42Q9H9J4 1324 aaKnown RBP8.4□□□□□ -1.06
ABCA13-202ENST00000417403 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.07
ABCA13-202ENST00000417403 SMARCA5O60264 1052 aaPredicted RBP8.4□□□□□ -1.07
ABCA13-202ENST00000417403 ATP6V1AP38606 617 aa8.4□□□□□ -1.07
ABCA13-202ENST00000417403 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.07
ABCA13-202ENST00000417403 NLRP10Q86W26 655 aa8.4□□□□□ -1.07
ABCA13-202ENST00000417403 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.07
ABCA13-202ENST00000417403 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.07
ABCA13-202ENST00000417403 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.07
ABCA13-202ENST00000417403 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.07
ABCA13-202ENST00000417403 CSF1RP07333 972 aa8.39□□□□□ -1.07
ABCA13-202ENST00000417403 UBTFL1P0CB47 393 aaPredicted RBP8.39□□□□□ -1.07
ABCA13-202ENST00000417403 RC3H1Q5TC82 1133 aaKnown RBP8.39□□□□□ -1.07
ABCA13-202ENST00000417403 MEX3CQ5U5Q3 659 aaKnown RBP8.39□□□□□ -1.07
ABCA13-202ENST00000417403 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
ABCA13-202ENST00000417403 LNPKQ9C0E8 428 aa8.39□□□□□ -1.07
ABCA13-202ENST00000417403 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 RBM6P78332 1123 aaKnown RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 EXOC6BQ9Y2D4 811 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 CDHR2Q9BYE9 1310 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 STARD3NLO95772 234 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 MYCNP04198 464 aaPredicted RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 ATG9AQ7Z3C6 839 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 DDX58O95786 925 aaKnown RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 KRT27Q7Z3Y8 459 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 KLHDC4Q8TBB5 520 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 PA2G4Q9UQ80 394 aaKnown RBP8.38□□□□□ -1.07
ABCA13-202ENST00000417403 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 MYH7P12883 1935 aa8.38□□□□□ -1.07
ABCA13-202ENST00000417403 NTSR2O95665 410 aa8.37□□□□□ -1.07
ABCA13-202ENST00000417403 SRCAPQ6ZRS2 3230 aa8.37□□□□□ -1.07
ABCA13-202ENST00000417403 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
ABCA13-202ENST00000417403 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
ABCA13-202ENST00000417403 PCCAP05165 728 aaPredicted RBP8.37□□□□□ -1.07
ABCA13-202ENST00000417403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.37□□□□□ -1.07
ABCA13-202ENST00000417403 UBE3BQ7Z3V4 1068 aa8.37□□□□□ -1.07
ABCA13-202ENST00000417403 UBE2Q2Q8WVN8 375 aa8.37□□□□□ -1.07
ABCA13-202ENST00000417403 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
ABCA13-202ENST00000417403 RGS3P49796 1198 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 ZBTB38Q8NAP3 1195 aaPredicted RBP8.36□□□□□ -1.07
ABCA13-202ENST00000417403 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 MTMR7Q9Y216 660 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms