RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-208	ENST00000417285	SLC10A5	Q5PT55	438 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	DNAJC5G	Q8N7S2	189 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	XAGE3	Q8WTP9	111 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	RBM17	Q96I25	401 aa	Known RBP	32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	NLRP3	Q96P20	1036 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	CRAMP1	Q96RY5	1269 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	ARFGEF2	Q9Y6D5	1785 aa		32.98	■■■□□ 2.87
VEGFA-208	ENST00000417285	CALD1	Q05682	793 aa	Known RBP	32.97	■■■□□ 2.87
VEGFA-208	ENST00000417285	AIMP1	Q12904	312 aa	Known RBP	32.97	■■■□□ 2.87
VEGFA-208	ENST00000417285	RNF123	Q5XPI4	1314 aa		32.97	■■■□□ 2.87
VEGFA-208	ENST00000417285	KRT24	Q2M2I5	525 aa		32.96	■■■□□ 2.87
VEGFA-208	ENST00000417285	APAF1	O14727	1248 aa		32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	HDGFL1	Q5TGJ6	251 aa		32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	OLFM4	Q6UX06	510 aa		32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	PSMD1	Q99460	953 aa		32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	DBF4	Q9UBU7	674 aa	Predicted RBP	32.95	■■■□□ 2.87
VEGFA-208	ENST00000417285	DICER1	Q9UPY3	1922 aa	Known RBP	32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	DDN	O94850	711 aa	Predicted RBP	32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	TCIRG1	Q13488	830 aa		32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	SYNE4	Q8N205	404 aa		32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	TIAM2	Q8IVF5	1701 aa		32.94	■■■□□ 2.86
VEGFA-208	ENST00000417285	ZNF853	P0CG23	659 aa		32.92	■■■□□ 2.86
VEGFA-208	ENST00000417285	CHPF2	Q9P2E5	772 aa		32.92	■■■□□ 2.86
VEGFA-208	ENST00000417285	IARS	P41252	1262 aa	Known RBP	32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	GNAI1	P63096	354 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	DUSP27	Q5VZP5	1158 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	NLRP10	Q86W26	655 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	MBIP	Q9NS73	344 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	IFT57	Q9NWB7	429 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	WDR90	Q96KV7	1748 aa		32.91	■■■□□ 2.86
VEGFA-208	ENST00000417285	IQCA1L	A6NCM1	817 aa		32.9	■■■□□ 2.86
VEGFA-208	ENST00000417285	TMX4	Q9H1E5	349 aa	Predicted RBP	32.9	■■■□□ 2.86
VEGFA-208	ENST00000417285	HYPK	Q9NX55	129 aa		32.9	■■■□□ 2.86
VEGFA-208	ENST00000417285	CACNA1S	Q13698	1873 aa		32.89	■■■□□ 2.86
VEGFA-208	ENST00000417285	ANKRD13D	Q6ZTN6	518 aa		32.89	■■■□□ 2.86
VEGFA-208	ENST00000417285	PLBD2	Q8NHP8	589 aa		32.89	■■■□□ 2.86
VEGFA-208	ENST00000417285	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.89	■■■□□ 2.86
VEGFA-208	ENST00000417285	JDP2	Q8WYK2	163 aa		32.88	■■■□□ 2.85
VEGFA-208	ENST00000417285	TRMT112	Q9UI30	125 aa	Known RBP	32.88	■■■□□ 2.85
VEGFA-208	ENST00000417285	C3orf67	Q6ZVT6	689 aa		32.87	■■■□□ 2.85
VEGFA-208	ENST00000417285	PPEF1	O14829	653 aa	Predicted RBP	32.86	■■■□□ 2.85
VEGFA-208	ENST00000417285	CHMP4A	Q9BY43	222 aa		32.86	■■■□□ 2.85
VEGFA-208	ENST00000417285	FZD9	O00144	591 aa		32.85	■■■□□ 2.85
VEGFA-208	ENST00000417285	SH3TC1	Q8TE82	1336 aa		32.84	■■■□□ 2.85
VEGFA-208	ENST00000417285	BBOX1	O75936	387 aa		32.84	■■■□□ 2.85
VEGFA-208	ENST00000417285	CHADL	Q6NUI6	762 aa		32.83	■■■□□ 2.85
VEGFA-208	ENST00000417285	KLRG1	Q96E93	195 aa		32.83	■■■□□ 2.85
VEGFA-208	ENST00000417285	SNED1	Q8TER0	1413 aa		32.83	■■■□□ 2.85
VEGFA-208	ENST00000417285	HTRA3	P83110	453 aa		32.82	■■■□□ 2.84
VEGFA-208	ENST00000417285	ATP6V0A2	Q9Y487	856 aa		32.82	■■■□□ 2.84
VEGFA-208	ENST00000417285	HCLS1	P14317	486 aa	Predicted RBP	32.81	■■■□□ 2.84
VEGFA-208	ENST00000417285	VPS33B	Q9H267	617 aa		32.81	■■■□□ 2.84
VEGFA-208	ENST00000417285	TCERG1	O14776	1098 aa	Known RBP	32.8	■■■□□ 2.84
VEGFA-208	ENST00000417285	ANP32C	O43423	234 aa		32.8	■■■□□ 2.84
VEGFA-208	ENST00000417285	GPC2	Q8N158	579 aa		32.8	■■■□□ 2.84
VEGFA-208	ENST00000417285	ISCA1	Q9BUE6	129 aa		32.8	■■■□□ 2.84
VEGFA-208	ENST00000417285	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.8	■■■□□ 2.84
VEGFA-208	ENST00000417285	ZNF541	Q9H0D2	1346 aa		32.79	■■■□□ 2.84
VEGFA-208	ENST00000417285	CCDC184	Q52MB2	194 aa		32.79	■■■□□ 2.84
VEGFA-208	ENST00000417285	DDX46	Q7L014	1031 aa	Known RBP	32.79	■■■□□ 2.84
VEGFA-208	ENST00000417285	EIF6	P56537	245 aa	Known RBP	32.78	■■■□□ 2.84
VEGFA-208	ENST00000417285	TRIM28	Q13263	835 aa	Known RBP	32.78	■■■□□ 2.84
VEGFA-208	ENST00000417285	LARGE2	Q8N3Y3	721 aa		32.78	■■■□□ 2.84
VEGFA-208	ENST00000417285	HACL1	Q9UJ83	578 aa		32.78	■■■□□ 2.84
VEGFA-208	ENST00000417285	ABCC4	O15439	1325 aa		32.77	■■■□□ 2.84
VEGFA-208	ENST00000417285	LDHD	Q86WU2	507 aa		32.77	■■■□□ 2.84
VEGFA-208	ENST00000417285	SP8	Q8IXZ3	490 aa		32.77	■■■□□ 2.84
VEGFA-208	ENST00000417285	SUPT20H	Q8NEM7	779 aa		32.76	■■■□□ 2.83
VEGFA-208	ENST00000417285	ELL2	O00472	640 aa	Predicted RBP	32.75	■■■□□ 2.83
VEGFA-208	ENST00000417285	JMY	Q8N9B5	988 aa		32.75	■■■□□ 2.83
VEGFA-208	ENST00000417285	GOLGA2	Q08379	1002 aa		32.74	■■■□□ 2.83
VEGFA-208	ENST00000417285	CCDC27	Q2M243	656 aa		32.74	■■■□□ 2.83
VEGFA-208	ENST00000417285	TMC4	Q7Z404	712 aa		32.74	■■■□□ 2.83
VEGFA-208	ENST00000417285	RIC3	Q7Z5B4	369 aa		32.74	■■■□□ 2.83
VEGFA-208	ENST00000417285	PNMA8A	Q86V59	439 aa	Predicted RBP	32.74	■■■□□ 2.83
VEGFA-208	ENST00000417285	ATP5J2-PTCD1	G3V325	749 aa		32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	GRAP	Q13588	217 aa		32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	C8orf58	Q8NAV2	365 aa		32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	GRAPL	Q8TC17	118 aa	Predicted RBP	32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	MRS2	Q9HD23	443 aa		32.73	■■■□□ 2.83
VEGFA-208	ENST00000417285	POTEI	P0CG38	1075 aa		32.72	■■■□□ 2.83
VEGFA-208	ENST00000417285	POTEJ	P0CG39	1038 aa		32.72	■■■□□ 2.83
VEGFA-208	ENST00000417285	EPHX2	P34913	555 aa		32.72	■■■□□ 2.83
VEGFA-208	ENST00000417285	CCDC30	Q5VVM6	783 aa		32.72	■■■□□ 2.83
VEGFA-208	ENST00000417285	FAM89A	Q96GI7	184 aa		32.72	■■■□□ 2.83
VEGFA-208	ENST00000417285	NCBP3	Q53F19	620 aa	Known RBP	32.71	■■■□□ 2.83
VEGFA-208	ENST00000417285	NIM1K	Q8IY84	436 aa		32.71	■■■□□ 2.83
VEGFA-208	ENST00000417285	MPND	Q8N594	471 aa		32.71	■■■□□ 2.83
VEGFA-208	ENST00000417285	SCN4A	P35499	1836 aa		32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	PPIP5K2	O43314	1243 aa		32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	HSP90B1	P14625	803 aa	Known RBP	32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	SF3B3	Q15393	1217 aa	Known RBP	32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	DPP8	Q6V1X1	898 aa	Predicted RBP	32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	GJA3	Q9Y6H8	435 aa		32.7	■■■□□ 2.83
VEGFA-208	ENST00000417285	ANKRD36C	Q5JPF3	1778 aa		32.7	■■■□□ 2.82
VEGFA-208	ENST00000417285	EAPP	Q56P03	285 aa	Predicted RBP	32.69	■■■□□ 2.82
VEGFA-208	ENST00000417285	PHAX	Q9H814	394 aa	Known RBP	32.69	■■■□□ 2.82

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