RNA–Protein interactions for RNA: ENST00000417135.1

LINC02247-201, Transcript of long intergenic non-protein coding RNA 2247, humanhuman

TSL 3 BASIC

Gene LINC02247, Length 743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02247-201ENST00000417135 PSMD1Q99460 953 aa23.28■■□□□ 1.32
LINC02247-201ENST00000417135 TAF1DQ9H5J8 278 aaPredicted RBP23.28■■□□□ 1.32
LINC02247-201ENST00000417135 ZNF541Q9H0D2 1346 aa23.28■■□□□ 1.32
LINC02247-201ENST00000417135 PCNTO95613 3336 aa23.28■■□□□ 1.32
LINC02247-201ENST00000417135 NTSR2O95665 410 aa23.27■■□□□ 1.32
LINC02247-201ENST00000417135 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
LINC02247-201ENST00000417135 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
LINC02247-201ENST00000417135 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
LINC02247-201ENST00000417135 NUP98P52948 1817 aa23.26■■□□□ 1.31
LINC02247-201ENST00000417135 PDIA6Q15084 440 aa23.26■■□□□ 1.31
LINC02247-201ENST00000417135 EAPPQ56P03 285 aaPredicted RBP23.26■■□□□ 1.31
LINC02247-201ENST00000417135 NLRP3Q96P20 1036 aa23.26■■□□□ 1.31
LINC02247-201ENST00000417135 CRAMP1Q96RY5 1269 aa23.26■■□□□ 1.31
LINC02247-201ENST00000417135 UTP14AQ9BVJ6 771 aaKnown RBP23.26■■□□□ 1.31
LINC02247-201ENST00000417135 TMX4Q9H1E5 349 aaPredicted RBP23.26■■□□□ 1.31
LINC02247-201ENST00000417135 HACL1Q9UJ83 578 aa23.26■■□□□ 1.31
LINC02247-201ENST00000417135 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
LINC02247-201ENST00000417135 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
LINC02247-201ENST00000417135 FZD9O00144 591 aa23.25■■□□□ 1.31
LINC02247-201ENST00000417135 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
LINC02247-201ENST00000417135 ANXA1P04083 346 aa23.25■■□□□ 1.31
LINC02247-201ENST00000417135 CREBZFQ9NS37 354 aa23.25■■□□□ 1.31
LINC02247-201ENST00000417135 CLEC11AQ9Y240 323 aa23.25■■□□□ 1.31
LINC02247-201ENST00000417135 PPEF1O14829 653 aaPredicted RBP23.24■■□□□ 1.31
LINC02247-201ENST00000417135 AIMP1Q12904 312 aaKnown RBP23.24■■□□□ 1.31
LINC02247-201ENST00000417135 PROSER3Q2NL68 480 aa23.24■■□□□ 1.31
LINC02247-201ENST00000417135 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
LINC02247-201ENST00000417135 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
LINC02247-201ENST00000417135 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
LINC02247-201ENST00000417135 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
LINC02247-201ENST00000417135 COPS6Q7L5N1 327 aa23.23■■□□□ 1.31
LINC02247-201ENST00000417135 GPC2Q8N158 579 aa23.23■■□□□ 1.31
LINC02247-201ENST00000417135 EPHX2P34913 555 aa23.22■■□□□ 1.31
LINC02247-201ENST00000417135 PNMA8AQ86V59 439 aaPredicted RBP23.22■■□□□ 1.31
LINC02247-201ENST00000417135 LARGE2Q8N3Y3 721 aa23.22■■□□□ 1.31
LINC02247-201ENST00000417135 C3orf67Q6ZVT6 689 aa23.21■■□□□ 1.31
LINC02247-201ENST00000417135 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
LINC02247-201ENST00000417135 GJA3Q9Y6H8 435 aa23.21■■□□□ 1.31
LINC02247-201ENST00000417135 RNF123Q5XPI4 1314 aa23.21■■□□□ 1.31
LINC02247-201ENST00000417135 CHL1O00533 1208 aa23.2■■□□□ 1.3
LINC02247-201ENST00000417135 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
LINC02247-201ENST00000417135 COL13A1Q5TAT6 717 aaPredicted RBP23.2■■□□□ 1.3
LINC02247-201ENST00000417135 DDX21Q9NR30 783 aaKnown RBP eCLIP23.2■■□□□ 1.3
LINC02247-201ENST00000417135 MKRN1Q9UHC7 482 aaKnown RBP23.2■■□□□ 1.3
LINC02247-201ENST00000417135 SCN4AP35499 1836 aa23.19■■□□□ 1.3
LINC02247-201ENST00000417135 HSPA1AP0DMV8 641 aaKnown RBP23.19■■□□□ 1.3
LINC02247-201ENST00000417135 HSPA1BP0DMV9 641 aaKnown RBP23.19■■□□□ 1.3
LINC02247-201ENST00000417135 SNED1Q8TER0 1413 aa23.18■■□□□ 1.3
LINC02247-201ENST00000417135 LMOD1P29536 600 aaPredicted RBP23.18■■□□□ 1.3
LINC02247-201ENST00000417135 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
LINC02247-201ENST00000417135 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
LINC02247-201ENST00000417135 PASKQ96RG2 1323 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 TCIRG1Q13488 830 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 NLRP10Q86W26 655 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 NIM1KQ8IY84 436 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
LINC02247-201ENST00000417135 ATP6V0A2Q9Y487 856 aa23.17■■□□□ 1.3
LINC02247-201ENST00000417135 TMEM88BA6NKF7 163 aa23.16■■□□□ 1.3
LINC02247-201ENST00000417135 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
LINC02247-201ENST00000417135 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
LINC02247-201ENST00000417135 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
LINC02247-201ENST00000417135 ABCC4O15439 1325 aa23.15■■□□□ 1.3
LINC02247-201ENST00000417135 BBOX1O75936 387 aa23.15■■□□□ 1.3
LINC02247-201ENST00000417135 ITGBL1O95965 494 aaPredicted RBP23.15■■□□□ 1.3
LINC02247-201ENST00000417135 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
LINC02247-201ENST00000417135 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
LINC02247-201ENST00000417135 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
LINC02247-201ENST00000417135 MAP1SQ66K74 1059 aaPredicted RBP23.14■■□□□ 1.29
LINC02247-201ENST00000417135 DDX46Q7L014 1031 aaKnown RBP23.14■■□□□ 1.29
LINC02247-201ENST00000417135 SLC51AQ86UW1 340 aa23.14■■□□□ 1.29
LINC02247-201ENST00000417135 CNTROBQ8N137 903 aa23.14■■□□□ 1.29
LINC02247-201ENST00000417135 VPS33BQ9H267 617 aa23.14■■□□□ 1.29
LINC02247-201ENST00000417135 HOXB7P09629 217 aa23.13■■□□□ 1.29
LINC02247-201ENST00000417135 AOC3Q16853 763 aa23.13■■□□□ 1.29
LINC02247-201ENST00000417135 TNS4Q8IZW8 715 aa23.13■■□□□ 1.29
LINC02247-201ENST00000417135 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
LINC02247-201ENST00000417135 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
LINC02247-201ENST00000417135 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
LINC02247-201ENST00000417135 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
LINC02247-201ENST00000417135 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
LINC02247-201ENST00000417135 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
LINC02247-201ENST00000417135 SP8Q8IXZ3 490 aa23.11■■□□□ 1.29
LINC02247-201ENST00000417135 MPNDQ8N594 471 aa23.1■■□□□ 1.29
LINC02247-201ENST00000417135 ZNF428Q96B54 188 aa23.1■■□□□ 1.29
LINC02247-201ENST00000417135 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
LINC02247-201ENST00000417135 HYPKQ9NX55 129 aa23.1■■□□□ 1.29
LINC02247-201ENST00000417135 COL4A5P29400 1685 aa23.09■■□□□ 1.29
LINC02247-201ENST00000417135 EPS15P42566 896 aa23.09■■□□□ 1.29
LINC02247-201ENST00000417135 SCNN1DP51172 638 aa23.09■■□□□ 1.29
LINC02247-201ENST00000417135 GRAPQ13588 217 aa23.09■■□□□ 1.29
LINC02247-201ENST00000417135 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
LINC02247-201ENST00000417135 GRAPLQ8TC17 118 aaPredicted RBP23.09■■□□□ 1.29
LINC02247-201ENST00000417135 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
LINC02247-201ENST00000417135 ZNRF3Q9ULT6 936 aa23.08■■□□□ 1.29
LINC02247-201ENST00000417135 VEGFBP49765 207 aa23.07■■□□□ 1.28
LINC02247-201ENST00000417135 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
LINC02247-201ENST00000417135 USP50Q70EL3 339 aaPredicted RBP23.07■■□□□ 1.28
LINC02247-201ENST00000417135 TMC4Q7Z404 712 aa23.07■■□□□ 1.28
LINC02247-201ENST00000417135 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms