RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 PHACTR3Q96KR7 559 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
RBM39-209ENST00000416529 SLC52A2Q9HAB3 445 aa10.03□□□□□ -0.8
RBM39-209ENST00000416529 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
RBM39-209ENST00000416529 CABP4P57796 275 aa10.02□□□□□ -0.81
RBM39-209ENST00000416529 PRR14Q9BWN1 585 aa10.02□□□□□ -0.81
RBM39-209ENST00000416529 TEX13AQ9BXU3 409 aaPredicted RBP10.02□□□□□ -0.81
RBM39-209ENST00000416529 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
RBM39-209ENST00000416529 APAF1O14727 1248 aa10.01□□□□□ -0.81
RBM39-209ENST00000416529 TRIM37O94972 964 aa10.01□□□□□ -0.81
RBM39-209ENST00000416529 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
RBM39-209ENST00000416529 GNAI1P63096 354 aa10.01□□□□□ -0.81
RBM39-209ENST00000416529 TAF7Q15545 349 aaPredicted RBP10.01□□□□□ -0.81
RBM39-209ENST00000416529 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
RBM39-209ENST00000416529 FAM9BQ8IZU0 186 aa10.01□□□□□ -0.81
RBM39-209ENST00000416529 DLG5Q8TDM6 1919 aa10□□□□□ -0.81
RBM39-209ENST00000416529 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
RBM39-209ENST00000416529 HOXB7P09629 217 aa10□□□□□ -0.81
RBM39-209ENST00000416529 PLCB2Q00722 1185 aa10□□□□□ -0.81
RBM39-209ENST00000416529 IL21Q9HBE4 155 aa10□□□□□ -0.81
RBM39-209ENST00000416529 IFT57Q9NWB7 429 aa10□□□□□ -0.81
RBM39-209ENST00000416529 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
RBM39-209ENST00000416529 ITGB4P16144 1822 aa9.99□□□□□ -0.81
RBM39-209ENST00000416529 APBA3O96018 575 aa9.99□□□□□ -0.81
RBM39-209ENST00000416529 PTGDRQ13258 359 aa9.99□□□□□ -0.81
RBM39-209ENST00000416529 IL17REQ8NFR9 667 aa9.99□□□□□ -0.81
RBM39-209ENST00000416529 RBM46Q8TBY0 533 aaKnown RBP9.99□□□□□ -0.81
RBM39-209ENST00000416529 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
RBM39-209ENST00000416529 CICQ96RK0 1608 aaPredicted RBP9.99□□□□□ -0.81
RBM39-209ENST00000416529 VIRMAQ69YN4 1812 aaKnown RBP9.98□□□□□ -0.81
RBM39-209ENST00000416529 C3orf80F5H4A9 247 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 CT47B1P0C2W7 299 aaPredicted RBP9.98□□□□□ -0.81
RBM39-209ENST00000416529 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 MPRIPQ6WCQ1 1025 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 TTC5Q8N0Z6 440 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 MYH16Q9H6N6 1097 aa9.98□□□□□ -0.81
RBM39-209ENST00000416529 DOT1LQ8TEK3 1739 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 SIPA1L3O60292 1781 aaPredicted RBP9.97□□□□□ -0.81
RBM39-209ENST00000416529 CHL1O00533 1208 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 ZNF853P0CG23 659 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
RBM39-209ENST00000416529 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 PIGBQ92521 554 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 MTRQ99707 1265 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 ZNF521Q96K83 1311 aa9.97□□□□□ -0.81
RBM39-209ENST00000416529 BTBD11A6QL63 1104 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 E9PSI1 815 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 DNAJB2P25686 324 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
RBM39-209ENST00000416529 ZNF790Q6PG37 636 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 FMNL2Q96PY5 1086 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 TNS1Q9HBL0 1735 aaKnown RBP9.96□□□□□ -0.82
RBM39-209ENST00000416529 BTAF1O14981 1849 aa9.96□□□□□ -0.82
RBM39-209ENST00000416529 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 FLAD1Q8NFF5 587 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 HEG1Q9ULI3 1381 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 LY75O60449 1722 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 CACNA1FO60840 1977 aa9.95□□□□□ -0.82
RBM39-209ENST00000416529 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 PAPPAQ13219 1627 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 PALLDQ8WX93 1383 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 STARD3NLO95772 234 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
RBM39-209ENST00000416529 SYTL4Q96C24 671 aaPredicted RBP9.94□□□□□ -0.82
RBM39-209ENST00000416529 CAMKK2Q96RR4 588 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
RBM39-209ENST00000416529 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 GGCXP38435 758 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 APLP1P51693 650 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 SIK1P57059 783 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 MCM10Q7L590 875 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 KDM3BQ7LBC6 1761 aa9.93□□□□□ -0.82
RBM39-209ENST00000416529 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
RBM39-209ENST00000416529 KCNQ2O43526 872 aa9.92□□□□□ -0.82
RBM39-209ENST00000416529 LAPTM4AQ15012 233 aa9.92□□□□□ -0.82
RBM39-209ENST00000416529 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
RBM39-209ENST00000416529 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
RBM39-209ENST00000416529 C5P01031 1676 aa9.91□□□□□ -0.82
RBM39-209ENST00000416529 EIF4A1P60842 406 aaKnown RBP9.91□□□□□ -0.82
RBM39-209ENST00000416529 TXNRD1Q16881 649 aa9.91□□□□□ -0.82
RBM39-209ENST00000416529 TRMT2AQ8IZ69 625 aaKnown RBP9.91□□□□□ -0.82
RBM39-209ENST00000416529 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
RBM39-209ENST00000416529 ADGRG1Q9Y653 693 aa9.91□□□□□ -0.82
RBM39-209ENST00000416529 A0A087WZG4 1122 aa9.9□□□□□ -0.82
RBM39-209ENST00000416529 SEMA3EO15041 775 aa9.9□□□□□ -0.82
RBM39-209ENST00000416529 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
RBM39-209ENST00000416529 OATP04181 439 aa9.9□□□□□ -0.82
RBM39-209ENST00000416529 ZNF784Q8NCA9 323 aaPredicted RBP9.9□□□□□ -0.82
RBM39-209ENST00000416529 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
RBM39-209ENST00000416529 CCNL1Q9UK58 526 aaPredicted RBP9.9□□□□□ -0.82
RBM39-209ENST00000416529 ASAP1Q9ULH1 1129 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms