RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 IL16Q14005 1332 aa28.37■■■□□ 2.13
HMG20B-203ENST00000416526 CCDC88AQ3V6T2 1871 aa28.36■■■□□ 2.13
HMG20B-203ENST00000416526 ANKRD13DQ6ZTN6 518 aa28.36■■■□□ 2.13
HMG20B-203ENST00000416526 PLBD2Q8NHP8 589 aa28.36■■■□□ 2.13
HMG20B-203ENST00000416526 LMNB1P20700 586 aa28.35■■■□□ 2.13
HMG20B-203ENST00000416526 C1QTNF8P60827 252 aa28.35■■■□□ 2.13
HMG20B-203ENST00000416526 C3orf67Q6ZVT6 689 aa28.35■■■□□ 2.13
HMG20B-203ENST00000416526 UTP14AQ9BVJ6 771 aaKnown RBP28.35■■■□□ 2.13
HMG20B-203ENST00000416526 PHAXQ9H814 394 aaKnown RBP28.34■■■□□ 2.13
HMG20B-203ENST00000416526 SLC10A5Q5PT55 438 aa28.32■■■□□ 2.12
HMG20B-203ENST00000416526 ALDH1B1P30837 517 aa28.31■■■□□ 2.12
HMG20B-203ENST00000416526 HOXA10P31260 410 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-203ENST00000416526 OLFM4Q6UX06 510 aa28.31■■■□□ 2.12
HMG20B-203ENST00000416526 WDR63Q8IWG1 891 aa28.31■■■□□ 2.12
HMG20B-203ENST00000416526 SYNE4Q8N205 404 aa28.31■■■□□ 2.12
HMG20B-203ENST00000416526 ISCA1Q9BUE6 129 aa28.31■■■□□ 2.12
HMG20B-203ENST00000416526 LTBP3Q9NS15 1303 aa28.3■■■□□ 2.12
HMG20B-203ENST00000416526 KIF3CO14782 793 aa28.3■■■□□ 2.12
HMG20B-203ENST00000416526 SOGA3Q5TF21 947 aa28.3■■■□□ 2.12
HMG20B-203ENST00000416526 CCDC30Q5VVM6 783 aa28.3■■■□□ 2.12
HMG20B-203ENST00000416526 ZNF428Q96B54 188 aa28.3■■■□□ 2.12
HMG20B-203ENST00000416526 TIAM2Q8IVF5 1701 aa28.29■■■□□ 2.12
HMG20B-203ENST00000416526 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
HMG20B-203ENST00000416526 FANCIQ9NVI1 1328 aa28.29■■■□□ 2.12
HMG20B-203ENST00000416526 TAOK3Q9H2K8 898 aa28.29■■■□□ 2.12
HMG20B-203ENST00000416526 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
HMG20B-203ENST00000416526 RPGRQ92834 1020 aaKnown RBP28.28■■■□□ 2.12
HMG20B-203ENST00000416526 NMRK2Q9NPI5 230 aa28.28■■■□□ 2.12
HMG20B-203ENST00000416526 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
HMG20B-203ENST00000416526 LAMB2P55268 1798 aa28.27■■■□□ 2.12
HMG20B-203ENST00000416526 ZC3H4Q9UPT8 1303 aaKnown RBP28.27■■■□□ 2.12
HMG20B-203ENST00000416526 TWISTNBQ3B726 338 aaPredicted RBP28.27■■■□□ 2.12
HMG20B-203ENST00000416526 CCDC93Q567U6 631 aa28.27■■■□□ 2.12
HMG20B-203ENST00000416526 NLRP3Q96P20 1036 aa28.27■■■□□ 2.12
HMG20B-203ENST00000416526 SPINK5Q9NQ38 1064 aaPredicted RBP28.27■■■□□ 2.12
HMG20B-203ENST00000416526 DICER1Q9UPY3 1922 aaKnown RBP28.27■■■□□ 2.12
HMG20B-203ENST00000416526 TCERG1O14776 1098 aaKnown RBP28.26■■■□□ 2.11
HMG20B-203ENST00000416526 HCLS1P14317 486 aaPredicted RBP28.26■■■□□ 2.11
HMG20B-203ENST00000416526 SH3TC1Q8TE82 1336 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 GOLGA2Q08379 1002 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 RIC3Q7Z5B4 369 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 CRAMP1Q96RY5 1269 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 CHMP4AQ9BY43 222 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 SNED1Q8TER0 1413 aa28.25■■■□□ 2.11
HMG20B-203ENST00000416526 SLC51AQ86UW1 340 aa28.24■■■□□ 2.11
HMG20B-203ENST00000416526 RBM17Q96I25 401 aaKnown RBP28.24■■■□□ 2.11
HMG20B-203ENST00000416526 TRIM28Q13263 835 aaKnown RBP28.23■■■□□ 2.11
HMG20B-203ENST00000416526 DDX60Q8IY21 1712 aaKnown RBP28.23■■■□□ 2.11
HMG20B-203ENST00000416526 KDM2BQ8NHM5 1336 aa28.21■■■□□ 2.11
HMG20B-203ENST00000416526 FAM89AQ96GI7 184 aa28.21■■■□□ 2.11
HMG20B-203ENST00000416526 FKBP4Q02790 459 aaKnown RBP eCLIP28.2■■■□□ 2.1
HMG20B-203ENST00000416526 RTKN2Q8IZC4 609 aa28.2■■■□□ 2.1
HMG20B-203ENST00000416526 MYD88Q99836 296 aa28.2■■■□□ 2.1
HMG20B-203ENST00000416526 ZNF521Q96K83 1311 aa28.19■■■□□ 2.1
HMG20B-203ENST00000416526 GLTPD2A6NH11 291 aa28.19■■■□□ 2.1
HMG20B-203ENST00000416526 VAMP4O75379 141 aa28.19■■■□□ 2.1
HMG20B-203ENST00000416526 EXOSC9Q06265 439 aaKnown RBP28.19■■■□□ 2.1
HMG20B-203ENST00000416526 G2E3Q7L622 706 aa28.19■■■□□ 2.1
HMG20B-203ENST00000416526 STK31Q9BXU1 1019 aa28.19■■■□□ 2.1
HMG20B-203ENST00000416526 ABCC4O15439 1325 aa28.18■■■□□ 2.1
HMG20B-203ENST00000416526 PPEF1O14829 653 aaPredicted RBP28.18■■■□□ 2.1
HMG20B-203ENST00000416526 METTL22Q9BUU2 404 aaPredicted RBP28.18■■■□□ 2.1
HMG20B-203ENST00000416526 RRAGCQ9HB90 399 aa28.18■■■□□ 2.1
HMG20B-203ENST00000416526 ZNF277Q9NRM2 450 aaPredicted RBP28.18■■■□□ 2.1
HMG20B-203ENST00000416526 DDX58O95786 925 aaKnown RBP28.17■■■□□ 2.1
HMG20B-203ENST00000416526 SLC4A2P04920 1241 aa28.17■■■□□ 2.1
HMG20B-203ENST00000416526 RTL5Q5HYW3 569 aaPredicted RBP28.17■■■□□ 2.1
HMG20B-203ENST00000416526 MAP3K2Q9Y2U5 619 aa28.17■■■□□ 2.1
HMG20B-203ENST00000416526 CC2D2BQ6DHV5 1058 aa28.16■■■□□ 2.1
HMG20B-203ENST00000416526 KSR2Q6VAB6 950 aa28.16■■■□□ 2.1
HMG20B-203ENST00000416526 TAF1P21675 1872 aa28.15■■■□□ 2.1
HMG20B-203ENST00000416526 PI4KAP2A4QPH2 592 aa28.15■■■□□ 2.1
HMG20B-203ENST00000416526 PI4KAP1Q8N8J0 262 aa28.15■■■□□ 2.1
HMG20B-203ENST00000416526 MYH16Q9H6N6 1097 aa28.15■■■□□ 2.1
HMG20B-203ENST00000416526 PSMD1Q99460 953 aa28.14■■■□□ 2.1
HMG20B-203ENST00000416526 CCER2I3L3R5 266 aa28.13■■■□□ 2.09
HMG20B-203ENST00000416526 TOMM70O94826 608 aa28.13■■■□□ 2.09
HMG20B-203ENST00000416526 ZBTB38Q8NAP3 1195 aaPredicted RBP28.13■■■□□ 2.09
HMG20B-203ENST00000416526 CCDC191Q8NCU4 936 aa28.13■■■□□ 2.09
HMG20B-203ENST00000416526 ATP6V0A2Q9Y487 856 aa28.13■■■□□ 2.09
HMG20B-203ENST00000416526 IRS4O14654 1257 aaPredicted RBP28.12■■■□□ 2.09
HMG20B-203ENST00000416526 IARSP41252 1262 aaKnown RBP28.12■■■□□ 2.09
HMG20B-203ENST00000416526 SF3B3Q15393 1217 aaKnown RBP28.12■■■□□ 2.09
HMG20B-203ENST00000416526 DDX46Q7L014 1031 aaKnown RBP28.12■■■□□ 2.09
HMG20B-203ENST00000416526 CACNA1FO60840 1977 aa28.11■■■□□ 2.09
HMG20B-203ENST00000416526 BBOX1O75936 387 aa28.11■■■□□ 2.09
HMG20B-203ENST00000416526 IGKV5-2P06315 115 aa28.11■■■□□ 2.09
HMG20B-203ENST00000416526 CWC25Q9NXE8 425 aaPredicted RBP28.11■■■□□ 2.09
HMG20B-203ENST00000416526 WDR90Q96KV7 1748 aa28.11■■■□□ 2.09
HMG20B-203ENST00000416526 COL4A1P02462 1669 aa28.1■■■□□ 2.09
HMG20B-203ENST00000416526 POTECB2RU33 542 aa28.1■■■□□ 2.09
HMG20B-203ENST00000416526 FLIIQ13045 1269 aa28.1■■■□□ 2.09
HMG20B-203ENST00000416526 GRAPQ13588 217 aa28.1■■■□□ 2.09
HMG20B-203ENST00000416526 DPY19L2Q6NUT2 758 aa28.1■■■□□ 2.09
HMG20B-203ENST00000416526 GRAPLQ8TC17 118 aaPredicted RBP28.1■■■□□ 2.09
HMG20B-203ENST00000416526 JARID2Q92833 1246 aaPredicted RBP28.1■■■□□ 2.09
HMG20B-203ENST00000416526 PCCAP05165 728 aaPredicted RBP28.09■■■□□ 2.09
HMG20B-203ENST00000416526 GRIPAP1Q4V328 841 aa28.09■■■□□ 2.09
HMG20B-203ENST00000416526 COL4A5P29400 1685 aa28.09■■■□□ 2.09
HMG20B-203ENST00000416526 SP8Q8IXZ3 490 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms