RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
CPNE1-209ENST00000415920 NPHP1O15259 732 aa17.48■□□□□ 0.39
CPNE1-209ENST00000415920 ST5P78524 1137 aa17.48■□□□□ 0.39
CPNE1-209ENST00000415920 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
CPNE1-209ENST00000415920 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
CPNE1-209ENST00000415920 CAPN15O75808 1086 aa17.47■□□□□ 0.39
CPNE1-209ENST00000415920 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
CPNE1-209ENST00000415920 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
CPNE1-209ENST00000415920 DPY19L2Q6NUT2 758 aa17.47■□□□□ 0.39
CPNE1-209ENST00000415920 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
CPNE1-209ENST00000415920 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
CPNE1-209ENST00000415920 NUP98P52948 1817 aa17.47■□□□□ 0.39
CPNE1-209ENST00000415920 NPM2Q86SE8 214 aaKnown RBP17.46■□□□□ 0.39
CPNE1-209ENST00000415920 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-209ENST00000415920 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
CPNE1-209ENST00000415920 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
CPNE1-209ENST00000415920 HLFQ16534 295 aa17.45■□□□□ 0.38
CPNE1-209ENST00000415920 VAMP4O75379 141 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 CHADLQ6NUI6 762 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
CPNE1-209ENST00000415920 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-209ENST00000415920 MYL6BP14649 208 aa17.43■□□□□ 0.38
CPNE1-209ENST00000415920 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
CPNE1-209ENST00000415920 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
CPNE1-209ENST00000415920 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
CPNE1-209ENST00000415920 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-209ENST00000415920 MKRN1Q9UHC7 482 aaKnown RBP17.43■□□□□ 0.38
CPNE1-209ENST00000415920 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
CPNE1-209ENST00000415920 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
CPNE1-209ENST00000415920 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-209ENST00000415920 ANXA1P04083 346 aa17.42■□□□□ 0.38
CPNE1-209ENST00000415920 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
CPNE1-209ENST00000415920 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 NPR1P16066 1061 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-209ENST00000415920 SCN4AP35499 1836 aa17.41■□□□□ 0.38
CPNE1-209ENST00000415920 SNED1Q8TER0 1413 aa17.4■□□□□ 0.38
CPNE1-209ENST00000415920 COL4A5P29400 1685 aa17.4■□□□□ 0.38
CPNE1-209ENST00000415920 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
CPNE1-209ENST00000415920 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-209ENST00000415920 ZNF652Q9Y2D9 606 aa17.4■□□□□ 0.38
CPNE1-209ENST00000415920 ADAMTSL1Q8N6G6 1762 aa17.4■□□□□ 0.38
CPNE1-209ENST00000415920 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
CPNE1-209ENST00000415920 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
CPNE1-209ENST00000415920 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
CPNE1-209ENST00000415920 L3MBTL3Q96JM7 780 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-209ENST00000415920 DDX21Q9NR30 783 aaKnown RBP eCLIP17.39■□□□□ 0.37
CPNE1-209ENST00000415920 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
CPNE1-209ENST00000415920 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
CPNE1-209ENST00000415920 PASKQ96RG2 1323 aa17.39■□□□□ 0.37
CPNE1-209ENST00000415920 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-209ENST00000415920 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
CPNE1-209ENST00000415920 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
CPNE1-209ENST00000415920 TPTE2Q6XPS3 522 aa17.38■□□□□ 0.37
CPNE1-209ENST00000415920 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
CPNE1-209ENST00000415920 PDIA6Q15084 440 aa17.37■□□□□ 0.37
CPNE1-209ENST00000415920 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
CPNE1-209ENST00000415920 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-209ENST00000415920 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
CPNE1-209ENST00000415920 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-209ENST00000415920 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
CPNE1-209ENST00000415920 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
CPNE1-209ENST00000415920 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
CPNE1-209ENST00000415920 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
CPNE1-209ENST00000415920 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 IQCA1LA6NCM1 817 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 RGL2O15211 777 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 BCAR3O75815 825 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
CPNE1-209ENST00000415920 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
CPNE1-209ENST00000415920 SYNE4Q8N205 404 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
CPNE1-209ENST00000415920 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
CPNE1-209ENST00000415920 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 CNTNAP1P78357 1384 aa17.35■□□□□ 0.37
CPNE1-209ENST00000415920 GPTP24298 496 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 FLIIQ13045 1269 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 G2E3Q7L622 706 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
CPNE1-209ENST00000415920 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 FZD9O00144 591 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 FOXN1O15353 648 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 EPHX2P34913 555 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-209ENST00000415920 LRP10Q7Z4F1 713 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 RTKN2Q8IZC4 609 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-209ENST00000415920 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
CPNE1-209ENST00000415920 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1000 ms