RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 LY75O60449 1722 aa16.14■□□□□ 0.17
HNF4A-204ENST00000415691 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
HNF4A-204ENST00000415691 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.17
HNF4A-204ENST00000415691 AMIGO3Q86WK7 504 aa16.14■□□□□ 0.17
HNF4A-204ENST00000415691 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
HNF4A-204ENST00000415691 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
HNF4A-204ENST00000415691 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
HNF4A-204ENST00000415691 CAMKK2Q96RR4 588 aa16.13■□□□□ 0.17
HNF4A-204ENST00000415691 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
HNF4A-204ENST00000415691 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
HNF4A-204ENST00000415691 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
HNF4A-204ENST00000415691 ADCY9O60503 1353 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
HNF4A-204ENST00000415691 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
HNF4A-204ENST00000415691 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
HNF4A-204ENST00000415691 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
HNF4A-204ENST00000415691 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
HNF4A-204ENST00000415691 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 CNTNAP4Q9C0A0 1308 aa16.12■□□□□ 0.17
HNF4A-204ENST00000415691 GNPATO15228 680 aa16.11■□□□□ 0.17
HNF4A-204ENST00000415691 DMTNQ08495 405 aa16.11■□□□□ 0.17
HNF4A-204ENST00000415691 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
HNF4A-204ENST00000415691 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.11■□□□□ 0.17
HNF4A-204ENST00000415691 ABCC4O15439 1325 aa16.11■□□□□ 0.17
HNF4A-204ENST00000415691 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
HNF4A-204ENST00000415691 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
HNF4A-204ENST00000415691 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
HNF4A-204ENST00000415691 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
HNF4A-204ENST00000415691 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
HNF4A-204ENST00000415691 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
HNF4A-204ENST00000415691 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
HNF4A-204ENST00000415691 COL5A3P25940 1745 aaPredicted RBP16.1■□□□□ 0.17
HNF4A-204ENST00000415691 RPS6KA4O75676 772 aa16.1■□□□□ 0.17
HNF4A-204ENST00000415691 DDX58O95786 925 aaKnown RBP16.1■□□□□ 0.17
HNF4A-204ENST00000415691 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
HNF4A-204ENST00000415691 CICQ96RK0 1608 aaPredicted RBP16.09■□□□□ 0.17
HNF4A-204ENST00000415691 HLFQ16534 295 aa16.09■□□□□ 0.17
HNF4A-204ENST00000415691 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
HNF4A-204ENST00000415691 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
HNF4A-204ENST00000415691 AK7Q96M32 723 aa16.09■□□□□ 0.17
HNF4A-204ENST00000415691 PHF14O94880 888 aa16.08■□□□□ 0.17
HNF4A-204ENST00000415691 BAG4O95429 457 aaKnown RBP16.08■□□□□ 0.17
HNF4A-204ENST00000415691 KIF2CQ99661 725 aa16.08■□□□□ 0.17
HNF4A-204ENST00000415691 BAG6P46379 1132 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 FGD1P98174 961 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 BEND3Q5T5X7 828 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
HNF4A-204ENST00000415691 DDX19BQ9UMR2 479 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
HNF4A-204ENST00000415691 CACNA1FO60840 1977 aa16.08■□□□□ 0.16
HNF4A-204ENST00000415691 MYD88Q99836 296 aa16.07■□□□□ 0.16
HNF4A-204ENST00000415691 TAF1LQ8IZX4 1826 aa16.07■□□□□ 0.16
HNF4A-204ENST00000415691 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
HNF4A-204ENST00000415691 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
HNF4A-204ENST00000415691 KIF6Q6ZMV9 814 aa16.07■□□□□ 0.16
HNF4A-204ENST00000415691 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
HNF4A-204ENST00000415691 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.162e-13■■■■□ 24.1
HNF4A-204ENST00000415691 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
HNF4A-204ENST00000415691 C4BP0C0L5 1744 aa16.07■□□□□ 0.16
HNF4A-204ENST00000415691 COL15A1P39059 1388 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 BMP2KLQ5H9B9 411 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 CCDC39Q9UFE4 941 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 SSFA2P28290 1259 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
HNF4A-204ENST00000415691 RREB1Q92766 1687 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
HNF4A-204ENST00000415691 ZSCAN23Q3MJ62 389 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
HNF4A-204ENST00000415691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
HNF4A-204ENST00000415691 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
HNF4A-204ENST00000415691 NUCB2P80303 420 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 NUCB1Q02818 461 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
HNF4A-204ENST00000415691 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
HNF4A-204ENST00000415691 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
HNF4A-204ENST00000415691 KIF20AO95235 890 aa16.03■□□□□ 0.16
HNF4A-204ENST00000415691 ZSCAN20P17040 1043 aaPredicted RBP16.03■□□□□ 0.16
HNF4A-204ENST00000415691 GIGYF2Q6Y7W6 1299 aaKnown RBP16.03■□□□□ 0.16
HNF4A-204ENST00000415691 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
HNF4A-204ENST00000415691 LINS1Q8NG48 757 aa16.03■□□□□ 0.16
HNF4A-204ENST00000415691 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
HNF4A-204ENST00000415691 MEIS3Q99687 375 aa16.03■□□□□ 0.16
HNF4A-204ENST00000415691 RBSNQ9H1K0 784 aa16.03■□□□□ 0.16
HNF4A-204ENST00000415691 A0A087WZG4 1122 aa16.02■□□□□ 0.16
HNF4A-204ENST00000415691 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
HNF4A-204ENST00000415691 TCIRG1Q13488 830 aa16.02■□□□□ 0.16
HNF4A-204ENST00000415691 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
HNF4A-204ENST00000415691 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.15
HNF4A-204ENST00000415691 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.15
HNF4A-204ENST00000415691 CYP2E1P05181 493 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms