RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 CYP27B1O15528 508 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 CCDC83Q8IWF9 413 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 CCDC171Q6TFL3 1326 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 CHGBP05060 677 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 PDLIM2Q96JY6 352 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
RBM28-202ENST00000415472 NDUFB9Q9Y6M9 179 aa14.04□□□□□ -0.16
RBM28-202ENST00000415472 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
RBM28-202ENST00000415472 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
RBM28-202ENST00000415472 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 ANP32BQ92688 251 aaKnown RBP14.03□□□□□ -0.16
RBM28-202ENST00000415472 KCNB2Q92953 911 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 STX6O43752 255 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
RBM28-202ENST00000415472 CREB3L3Q68CJ9 461 aa14.03□□□□□ -0.16
RBM28-202ENST00000415472 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
RBM28-202ENST00000415472 ME3Q16798 604 aa14.02□□□□□ -0.16
RBM28-202ENST00000415472 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.16
RBM28-202ENST00000415472 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.16
RBM28-202ENST00000415472 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.02□□□□□ -0.16
RBM28-202ENST00000415472 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.16
RBM28-202ENST00000415472 COL18A1P39060 1754 aa14.02□□□□□ -0.16
RBM28-202ENST00000415472 ATP5J2-PTCD1G3V325 749 aa14.02□□□□□ -0.17
RBM28-202ENST00000415472 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
RBM28-202ENST00000415472 CSB-PGBD3P0DP91 1061 aa14.02□□□□□ -0.17
RBM28-202ENST00000415472 VPS53Q5VIR6 699 aa14.02□□□□□ -0.17
RBM28-202ENST00000415472 MAP4K1Q92918 833 aa14.02□□□□□ -0.17
RBM28-202ENST00000415472 LMTK3Q96Q04 1460 aa14.02□□□□□ -0.17
RBM28-202ENST00000415472 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 GJB2P29033 226 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 MST1RQ04912 1400 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 SLC27A2O14975 620 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 F13A1P00488 732 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
RBM28-202ENST00000415472 NEXNQ0ZGT2 675 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 FSD1Q9BTV5 496 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 DBNLQ9UJU6 430 aaKnown RBP14.01□□□□□ -0.17
RBM28-202ENST00000415472 HDAC5Q9UQL6 1122 aa14.01□□□□□ -0.17
RBM28-202ENST00000415472 COL15A1P39059 1388 aa14□□□□□ -0.17
RBM28-202ENST00000415472 TMEM94Q12767 1356 aa14□□□□□ -0.17
RBM28-202ENST00000415472 FIBPO43427 364 aa14□□□□□ -0.17
RBM28-202ENST00000415472 IFNL2Q8IZJ0 200 aa14□□□□□ -0.17
RBM28-202ENST00000415472 MTMR6Q9Y217 621 aa14□□□□□ -0.17
RBM28-202ENST00000415472 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
RBM28-202ENST00000415472 KCNJ4P48050 445 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
RBM28-202ENST00000415472 TFCP2Q12800 502 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 TM6SF1Q9BZW5 370 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
RBM28-202ENST00000415472 ATF3P18847 181 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 SNRKQ9NRH2 765 aa13.99□□□□□ -0.17
RBM28-202ENST00000415472 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
RBM28-202ENST00000415472 DNM1Q05193 864 aaKnown RBP13.98□□□□□ -0.17
RBM28-202ENST00000415472 MRC1P22897 1456 aa13.98□□□□□ -0.17
RBM28-202ENST00000415472 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
RBM28-202ENST00000415472 DCAF5Q96JK2 942 aa13.98□□□□□ -0.17
RBM28-202ENST00000415472 CCDC9Q9Y3X0 531 aaKnown RBP13.98□□□□□ -0.17
RBM28-202ENST00000415472 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
RBM28-202ENST00000415472 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.174e-7■■■■□ 19.8
RBM28-202ENST00000415472 GLI3P10071 1580 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 NBPF26B4DH59 902 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 NBPF10Q6P3W6 841 aaKnown RBP13.97□□□□□ -0.17
RBM28-202ENST00000415472 FAM173BQ6P4H8 233 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 SEC62Q99442 399 aaKnown RBP13.97□□□□□ -0.17
RBM28-202ENST00000415472 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 FPGT-TNNI3KV9GXZ4 949 aa13.97□□□□□ -0.17
RBM28-202ENST00000415472 A0A087WZG4 1122 aa13.96□□□□□ -0.17
RBM28-202ENST00000415472 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
RBM28-202ENST00000415472 TAF5LO75529 589 aa13.96□□□□□ -0.17
RBM28-202ENST00000415472 CASP7P55210 303 aa13.96□□□□□ -0.17
RBM28-202ENST00000415472 SLFNL1Q499Z3 407 aa13.96□□□□□ -0.17
RBM28-202ENST00000415472 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
RBM28-202ENST00000415472 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
RBM28-202ENST00000415472 CABP4P57796 275 aa13.95□□□□□ -0.18
RBM28-202ENST00000415472 TOB2Q14106 344 aaPredicted RBP13.95□□□□□ -0.18
RBM28-202ENST00000415472 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
RBM28-202ENST00000415472 MPNDQ8N594 471 aa13.95□□□□□ -0.18
RBM28-202ENST00000415472 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
RBM28-202ENST00000415472 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
RBM28-202ENST00000415472 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
RBM28-202ENST00000415472 HIP1O00291 1037 aa13.95□□□□□ -0.18
RBM28-202ENST00000415472 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms