RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PLCB2Q00722 1185 aa21.49■■□□□ 1.03
SCARB1-203ENST00000415380 MYRIPQ8NFW9 859 aa21.49■■□□□ 1.03
SCARB1-203ENST00000415380 PRAMEF22A3QJZ6 481 aa21.48■■□□□ 1.03
SCARB1-203ENST00000415380 COL9A3Q14050 684 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-203ENST00000415380 SUCLG2Q96I99 432 aa21.48■■□□□ 1.03
SCARB1-203ENST00000415380 HDAC5Q9UQL6 1122 aa21.48■■□□□ 1.03
SCARB1-203ENST00000415380 EAF2Q96CJ1 260 aaPredicted RBP21.48■■□□□ 1.03
SCARB1-203ENST00000415380 PXDNQ92626 1479 aa21.47■■□□□ 1.03
SCARB1-203ENST00000415380 SLC27A2O14975 620 aa21.47■■□□□ 1.03
SCARB1-203ENST00000415380 LARP1BQ659C4 914 aaKnown RBP21.47■■□□□ 1.03
SCARB1-203ENST00000415380 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
SCARB1-203ENST00000415380 HIP1O00291 1037 aa21.47■■□□□ 1.03
SCARB1-203ENST00000415380 MTERF4Q7Z6M4 381 aaKnown RBP21.47■■□□□ 1.03
SCARB1-203ENST00000415380 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
SCARB1-203ENST00000415380 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
SCARB1-203ENST00000415380 GRM8O00222 908 aa21.46■■□□□ 1.03
SCARB1-203ENST00000415380 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
SCARB1-203ENST00000415380 TTC6Q86TZ1 520 aa21.46■■□□□ 1.03
SCARB1-203ENST00000415380 BICC1Q9H694 974 aaKnown RBP21.46■■□□□ 1.03
SCARB1-203ENST00000415380 SPTLC3Q9NUV7 552 aa21.46■■□□□ 1.03
SCARB1-203ENST00000415380 TLR7Q9NYK1 1049 aaKnown RBP21.46■■□□□ 1.03
SCARB1-203ENST00000415380 CHD2O14647 1828 aaKnown RBP21.46■■□□□ 1.03
SCARB1-203ENST00000415380 HEG1Q9ULI3 1381 aa21.45■■□□□ 1.03
SCARB1-203ENST00000415380 PSMA5P28066 241 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 G3BP1Q13283 466 aaKnown RBP eCLIP21.45■■□□□ 1.02
SCARB1-203ENST00000415380 AMOTQ4VCS5 1084 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 C1orf141Q5JVX7 400 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 PRIMPOLQ96LW4 560 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 SNRKQ9NRH2 765 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 A0A0D9SFI3 127 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 FERMT3Q86UX7 667 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 LINS1Q8NG48 757 aa21.45■■□□□ 1.02
SCARB1-203ENST00000415380 CCDC192P0DO97 292 aa21.44■■□□□ 1.02
SCARB1-203ENST00000415380 KRT85P78386 507 aa21.44■■□□□ 1.02
SCARB1-203ENST00000415380 KCNH5Q8NCM2 988 aa21.44■■□□□ 1.02
SCARB1-203ENST00000415380 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
SCARB1-203ENST00000415380 UTYO14607 1347 aa21.44■■□□□ 1.02
SCARB1-203ENST00000415380 FAM173BQ6P4H8 233 aa21.43■■□□□ 1.02
SCARB1-203ENST00000415380 BOLA2Q9H3K6 86 aa21.43■■□□□ 1.02
SCARB1-203ENST00000415380 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
SCARB1-203ENST00000415380 TCEANC2Q96MN5 208 aa21.43■■□□□ 1.02
SCARB1-203ENST00000415380 PSME1Q06323 249 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 BLOC1S2Q6QNY1 142 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 JARID2Q92833 1246 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-203ENST00000415380 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 TAF6LQ9Y6J9 622 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 LIG1P18858 919 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 SIL1Q9H173 461 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 KCNF1Q9H3M0 494 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 CHMP3Q9Y3E7 222 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 ELP1O95163 1332 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 PDIA4P13667 645 aaKnown RBP21.42■■□□□ 1.02
SCARB1-203ENST00000415380 PDCP20941 246 aa21.42■■□□□ 1.02
SCARB1-203ENST00000415380 HMGN5P82970 282 aaKnown RBP21.42■■□□□ 1.02
SCARB1-203ENST00000415380 AIMP1Q12904 312 aaKnown RBP21.42■■□□□ 1.02
SCARB1-203ENST00000415380 RBM33Q96EV2 1170 aaKnown RBP21.42■■□□□ 1.02
SCARB1-203ENST00000415380 OVOS2A0A0G2JMS6 1433 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 RPS6KB1P23443 525 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 ANKRD1Q15327 319 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 RNF20Q5VTR2 975 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 PHRF1Q9P1Y6 1649 aaKnown RBP21.41■■□□□ 1.02
SCARB1-203ENST00000415380 MED23Q9ULK4 1368 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 PKNOX2Q96KN3 472 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 NUP62CLQ9H1M0 184 aa21.41■■□□□ 1.02
SCARB1-203ENST00000415380 TOB2Q14106 344 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-203ENST00000415380 MAP3K11Q16584 847 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 DDX58O95786 925 aaKnown RBP21.4■■□□□ 1.02
SCARB1-203ENST00000415380 GTF2F1P35269 517 aaKnown RBP eCLIP21.4■■□□□ 1.025e-7■■■□□ 18.9
SCARB1-203ENST00000415380 CAMK4Q16566 473 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 SPC24Q8NBT2 197 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 KIAA1524Q8TCG1 905 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 ALDH8A1Q9H2A2 487 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-203ENST00000415380 PYCARDQ9ULZ3 195 aa21.4■■□□□ 1.02
SCARB1-203ENST00000415380 ZNF589Q86UQ0 364 aaPredicted RBP21.39■■□□□ 1.02
SCARB1-203ENST00000415380 KLHDC4Q8TBB5 520 aa21.39■■□□□ 1.02
SCARB1-203ENST00000415380 FAM200AQ8TCP9 573 aa21.39■■□□□ 1.02
SCARB1-203ENST00000415380 TSC1Q92574 1164 aa21.39■■□□□ 1.02
SCARB1-203ENST00000415380 ARID3AQ99856 593 aa21.39■■□□□ 1.02
SCARB1-203ENST00000415380 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.02
SCARB1-203ENST00000415380 MRVI1Q9Y6F6 885 aa21.39■■□□□ 1.02
SCARB1-203ENST00000415380 IGKV5-2P06315 115 aa21.38■■□□□ 1.01
SCARB1-203ENST00000415380 TPM3P06753 285 aa21.38■■□□□ 1.01
SCARB1-203ENST00000415380 PDIA6Q15084 440 aa21.38■■□□□ 1.01
SCARB1-203ENST00000415380 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
SCARB1-203ENST00000415380 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
SCARB1-203ENST00000415380 TYRO3Q06418 890 aa21.38■■□□□ 1.01
SCARB1-203ENST00000415380 JCADQ9P266 1359 aa21.37■■□□□ 1.01
SCARB1-203ENST00000415380 STK3Q13188 491 aa21.37■■□□□ 1.01
SCARB1-203ENST00000415380 ARHGEF25Q86VW2 580 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 SCAND2PQ9GZW5 306 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-203ENST00000415380 DACT1Q9NYF0 836 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
SCARB1-203ENST00000415380 GOLGA6L6A8MZA4 724 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 GCP02774 474 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 RIC3Q7Z5B4 369 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 ZNF710Q8N1W2 664 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 SPATA32Q96LK8 384 aa21.36■■□□□ 1.01
SCARB1-203ENST00000415380 HMG20BQ9P0W2 317 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms