RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 RIC1Q4ADV7 1423 aa32.13■■■□□ 2.73
AC005540.1-201ENST00000413911 GIGYF2Q6Y7W6 1299 aaKnown RBP32.13■■■□□ 2.73
AC005540.1-201ENST00000413911 PSMD1Q99460 953 aa32.13■■■□□ 2.73
AC005540.1-201ENST00000413911 MKRN1Q9UHC7 482 aaKnown RBP32.13■■■□□ 2.73
AC005540.1-201ENST00000413911 ERBB4Q15303 1308 aa32.12■■■□□ 2.73
AC005540.1-201ENST00000413911 RIPK4P57078 832 aa32.12■■■□□ 2.73
AC005540.1-201ENST00000413911 PROSER3Q2NL68 480 aa32.12■■■□□ 2.73
AC005540.1-201ENST00000413911 ITGBL1O95965 494 aaPredicted RBP32.11■■■□□ 2.73
AC005540.1-201ENST00000413911 ANXA1P04083 346 aa32.11■■■□□ 2.73
AC005540.1-201ENST00000413911 HACL1Q9UJ83 578 aa32.11■■■□□ 2.73
AC005540.1-201ENST00000413911 ADAMTSL1Q8N6G6 1762 aa32.1■■■□□ 2.73
AC005540.1-201ENST00000413911 RNF123Q5XPI4 1314 aa32.1■■■□□ 2.73
AC005540.1-201ENST00000413911 EIF2S2P20042 333 aaKnown RBP32.1■■■□□ 2.73
AC005540.1-201ENST00000413911 EAPPQ56P03 285 aaPredicted RBP32.1■■■□□ 2.73
AC005540.1-201ENST00000413911 RPGRQ92834 1020 aaKnown RBP32.1■■■□□ 2.73
AC005540.1-201ENST00000413911 EPHX2P34913 555 aa32.08■■■□□ 2.73
AC005540.1-201ENST00000413911 TMPOP42166 694 aaKnown RBP32.07■■■□□ 2.72
AC005540.1-201ENST00000413911 CC2D2BQ6DHV5 1058 aa32.07■■■□□ 2.72
AC005540.1-201ENST00000413911 CRAMP1Q96RY5 1269 aa32.07■■■□□ 2.72
AC005540.1-201ENST00000413911 TCERG1O14776 1098 aaKnown RBP32.06■■■□□ 2.72
AC005540.1-201ENST00000413911 RALBP1Q15311 655 aa32.06■■■□□ 2.72
AC005540.1-201ENST00000413911 GPC2Q8N158 579 aa32.06■■■□□ 2.72
AC005540.1-201ENST00000413911 RBM17Q96I25 401 aaKnown RBP32.05■■■□□ 2.72
AC005540.1-201ENST00000413911 TNS4Q8IZW8 715 aa32.04■■■□□ 2.72
AC005540.1-201ENST00000413911 JDP2Q8WYK2 163 aa32.04■■■□□ 2.72
AC005540.1-201ENST00000413911 CNTNAP1P78357 1384 aa32.04■■■□□ 2.72
AC005540.1-201ENST00000413911 PPEF1O14829 653 aaPredicted RBP32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 PARP10Q53GL7 1025 aa32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 PPP1R42Q7Z4L9 355 aa32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 NECTIN2Q92692 538 aa32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 BABAM1Q9NWV8 329 aa32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 CLEC11AQ9Y240 323 aa32.03■■■□□ 2.72
AC005540.1-201ENST00000413911 SLC10A5Q5PT55 438 aa32.02■■■□□ 2.72
AC005540.1-201ENST00000413911 LTBP1Q14766 1721 aa32.02■■■□□ 2.72
AC005540.1-201ENST00000413911 KRT24Q2M2I5 525 aa32.01■■■□□ 2.71
AC005540.1-201ENST00000413911 MAP1SQ66K74 1059 aaPredicted RBP32.01■■■□□ 2.71
AC005540.1-201ENST00000413911 CCDC146Q8IYE0 955 aa32.01■■■□□ 2.71
AC005540.1-201ENST00000413911 GJA3Q9Y6H8 435 aa32.01■■■□□ 2.71
AC005540.1-201ENST00000413911 PNMA8AQ86V59 439 aaPredicted RBP32■■■□□ 2.71
AC005540.1-201ENST00000413911 UTP14AQ9BVJ6 771 aaKnown RBP32■■■□□ 2.71
AC005540.1-201ENST00000413911 TMEM88BA6NKF7 163 aa31.99■■■□□ 2.71
AC005540.1-201ENST00000413911 COPS6Q7L5N1 327 aa31.99■■■□□ 2.71
AC005540.1-201ENST00000413911 LARGE2Q8N3Y3 721 aa31.99■■■□□ 2.71
AC005540.1-201ENST00000413911 NLRP3Q96P20 1036 aa31.99■■■□□ 2.71
AC005540.1-201ENST00000413911 CAPN15O75808 1086 aa31.98■■■□□ 2.71
AC005540.1-201ENST00000413911 EIF6P56537 245 aaKnown RBP31.98■■■□□ 2.71
AC005540.1-201ENST00000413911 NEUROD2Q15784 382 aa31.98■■■□□ 2.71
AC005540.1-201ENST00000413911 CNTROBQ8N137 903 aa31.98■■■□□ 2.71
AC005540.1-201ENST00000413911 XAGE3Q8WTP9 111 aa31.98■■■□□ 2.71
AC005540.1-201ENST00000413911 SCNN1DP51172 638 aa31.97■■■□□ 2.71
AC005540.1-201ENST00000413911 AIMP1Q12904 312 aaKnown RBP31.97■■■□□ 2.71
AC005540.1-201ENST00000413911 GRIPAP1Q4V328 841 aa31.97■■■□□ 2.71
AC005540.1-201ENST00000413911 ABCC4O15439 1325 aa31.97■■■□□ 2.71
AC005540.1-201ENST00000413911 CHL1O00533 1208 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 VEGFBP49765 207 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 LMOD3Q0VAK6 560 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 DDX10Q13206 875 aaKnown RBP31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 NLRP10Q86W26 655 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 TRIM35Q9UPQ4 493 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 ATP6V0A2Q9Y487 856 aa31.96■■■□□ 2.71
AC005540.1-201ENST00000413911 EPS15P42566 896 aa31.95■■■□□ 2.71
AC005540.1-201ENST00000413911 ANKRD36CQ5JPF3 1778 aa31.94■■■□□ 2.7
AC005540.1-201ENST00000413911 HCLS1P14317 486 aaPredicted RBP31.94■■■□□ 2.7
AC005540.1-201ENST00000413911 MYBBP1AQ9BQG0 1328 aaKnown RBP31.94■■■□□ 2.7
AC005540.1-201ENST00000413911 LAMB2P55268 1798 aa31.94■■■□□ 2.7
AC005540.1-201ENST00000413911 AOC3Q16853 763 aa31.93■■■□□ 2.7
AC005540.1-201ENST00000413911 FOXN1O15353 648 aa31.92■■■□□ 2.7
AC005540.1-201ENST00000413911 ZNF428Q96B54 188 aa31.92■■■□□ 2.7
AC005540.1-201ENST00000413911 DDX21Q9NR30 783 aaKnown RBP eCLIP31.92■■■□□ 2.7
AC005540.1-201ENST00000413911 PPIP5K2O43314 1243 aa31.91■■■□□ 2.7
AC005540.1-201ENST00000413911 FMR1Q06787 632 aaKnown RBP eCLIP31.91■■■□□ 2.7
AC005540.1-201ENST00000413911 TCIRG1Q13488 830 aa31.91■■■□□ 2.7
AC005540.1-201ENST00000413911 NIM1KQ8IY84 436 aa31.91■■■□□ 2.7
AC005540.1-201ENST00000413911 LAS1LQ9Y4W2 734 aaKnown RBP31.9■■■□□ 2.7
AC005540.1-201ENST00000413911 LMOD1P29536 600 aaPredicted RBP31.89■■■□□ 2.7
AC005540.1-201ENST00000413911 HSP90AB3PQ58FF7 597 aa31.89■■■□□ 2.7
AC005540.1-201ENST00000413911 RUNDC1Q96C34 613 aa31.89■■■□□ 2.7
AC005540.1-201ENST00000413911 RTFDC1Q9BY42 306 aaPredicted RBP31.89■■■□□ 2.7
AC005540.1-201ENST00000413911 CHPF2Q9P2E5 772 aa31.89■■■□□ 2.7
AC005540.1-201ENST00000413911 TRMT112Q9UI30 125 aaKnown RBP31.88■■■□□ 2.69
AC005540.1-201ENST00000413911 RASSF10A6NK89 507 aa31.87■■■□□ 2.69
AC005540.1-201ENST00000413911 ADAMTS8Q9UP79 889 aa31.87■■■□□ 2.69
AC005540.1-201ENST00000413911 BBOX1O75936 387 aa31.86■■■□□ 2.69
AC005540.1-201ENST00000413911 SP8Q8IXZ3 490 aa31.86■■■□□ 2.69
AC005540.1-201ENST00000413911 TAF1P21675 1872 aa31.85■■■□□ 2.69
AC005540.1-201ENST00000413911 SH3TC1Q8TE82 1336 aa31.85■■■□□ 2.69
AC005540.1-201ENST00000413911 CXCL9Q07325 125 aa31.85■■■□□ 2.69
AC005540.1-201ENST00000413911 VPS33BQ9H267 617 aa31.85■■■□□ 2.69
AC005540.1-201ENST00000413911 DEFB115Q30KQ5 88 aa31.84■■■□□ 2.69
AC005540.1-201ENST00000413911 TMX4Q9H1E5 349 aaPredicted RBP31.84■■■□□ 2.69
AC005540.1-201ENST00000413911 ZNRF3Q9ULT6 936 aa31.84■■■□□ 2.69
AC005540.1-201ENST00000413911 DPP8Q6V1X1 898 aaPredicted RBP31.83■■■□□ 2.69
AC005540.1-201ENST00000413911 USP50Q70EL3 339 aaPredicted RBP31.83■■■□□ 2.69
AC005540.1-201ENST00000413911 WBP1LQ9NX94 342 aa31.83■■■□□ 2.69
AC005540.1-201ENST00000413911 GPRC5DQ9NZD1 345 aa31.83■■■□□ 2.69
AC005540.1-201ENST00000413911 GRAPQ13588 217 aa31.82■■■□□ 2.68
AC005540.1-201ENST00000413911 HDGFL1Q5TGJ6 251 aa31.82■■■□□ 2.68
AC005540.1-201ENST00000413911 DDX46Q7L014 1031 aaKnown RBP31.82■■■□□ 2.68
AC005540.1-201ENST00000413911 MPNDQ8N594 471 aa31.82■■■□□ 2.68
AC005540.1-201ENST00000413911 GRAPLQ8TC17 118 aaPredicted RBP31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms