RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 ZPR1O75312 459 aa11.3□□□□□ -0.6
HCG18-234ENST00000413358 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
HCG18-234ENST00000413358 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
HCG18-234ENST00000413358 MYD88Q99836 296 aa11.3□□□□□ -0.6
HCG18-234ENST00000413358 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
HCG18-234ENST00000413358 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
HCG18-234ENST00000413358 FKBP8Q14318 412 aa11.29□□□□□ -0.6
HCG18-234ENST00000413358 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
HCG18-234ENST00000413358 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
HCG18-234ENST00000413358 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
HCG18-234ENST00000413358 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
HCG18-234ENST00000413358 DDX19BQ9UMR2 479 aa11.29□□□□□ -0.6
HCG18-234ENST00000413358 ERVV-1B6SEH8 477 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 CAMTA2O94983 1202 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
HCG18-234ENST00000413358 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
HCG18-234ENST00000413358 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
HCG18-234ENST00000413358 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
HCG18-234ENST00000413358 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
HCG18-234ENST00000413358 AFDNP55196 1824 aaKnown RBP11.28□□□□□ -0.6
HCG18-234ENST00000413358 GOLGB1Q14789 3259 aaKnown RBP11.27□□□□□ -0.6
HCG18-234ENST00000413358 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
HCG18-234ENST00000413358 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
HCG18-234ENST00000413358 BEND3Q5T5X7 828 aa11.27□□□□□ -0.61
HCG18-234ENST00000413358 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
HCG18-234ENST00000413358 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
HCG18-234ENST00000413358 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
HCG18-234ENST00000413358 ATP5J2-PTCD1G3V325 749 aa11.26□□□□□ -0.61
HCG18-234ENST00000413358 GPTP24298 496 aa11.26□□□□□ -0.61
HCG18-234ENST00000413358 HLFQ16534 295 aa11.26□□□□□ -0.61
HCG18-234ENST00000413358 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
HCG18-234ENST00000413358 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
HCG18-234ENST00000413358 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
HCG18-234ENST00000413358 NEURL1BA8MQ27 555 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 RGL2O15211 777 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 CLEC4GQ6UXB4 293 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 NMRK2Q9NPI5 230 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
HCG18-234ENST00000413358 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
HCG18-234ENST00000413358 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 NUP98P52948 1817 aa11.25□□□□□ -0.61
HCG18-234ENST00000413358 GNAI3P08754 354 aa11.24□□□□□ -0.61
HCG18-234ENST00000413358 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
HCG18-234ENST00000413358 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
HCG18-234ENST00000413358 CCDC191Q8NCU4 936 aa11.24□□□□□ -0.61
HCG18-234ENST00000413358 MEIS3Q99687 375 aa11.24□□□□□ -0.61
HCG18-234ENST00000413358 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
HCG18-234ENST00000413358 GRM8O00222 908 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 KCNA3P22001 575 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 FSTL1Q12841 308 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 GCKRQ14397 625 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 UBN2Q6ZU65 1347 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
HCG18-234ENST00000413358 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
HCG18-234ENST00000413358 NPHP1O15259 732 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 CHRNA5P30532 468 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 AAMPQ13685 434 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 PPP1R42Q7Z4L9 355 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 NLRP10Q86W26 655 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 HDAC5Q9UQL6 1122 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
HCG18-234ENST00000413358 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
HCG18-234ENST00000413358 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
HCG18-234ENST00000413358 GNAI2P04899 355 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 TM4SF1P30408 202 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 DDR1Q08345 913 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.61
HCG18-234ENST00000413358 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 ZNF34Q8IZ26 560 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 SMC1BQ8NDV3 1235 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 SETDB2Q96T68 719 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
HCG18-234ENST00000413358 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
HCG18-234ENST00000413358 TRMT112Q9UI30 125 aaKnown RBP11.21□□□□□ -0.61
HCG18-234ENST00000413358 H0YIN7 160 aa11.2□□□□□ -0.62
HCG18-234ENST00000413358 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
HCG18-234ENST00000413358 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
HCG18-234ENST00000413358 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
HCG18-234ENST00000413358 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
HCG18-234ENST00000413358 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
HCG18-234ENST00000413358 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
HCG18-234ENST00000413358 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
HCG18-234ENST00000413358 UTYO14607 1347 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
HCG18-234ENST00000413358 NTSR2O95665 410 aa11.19□□□□□ -0.62
HCG18-234ENST00000413358 SERPINB2P05120 415 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms