RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
CLTCL1-201ENST00000412649 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 NEK11Q8NG66 645 aa16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 CACTINQ8WUQ7 758 aaKnown RBP16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 BOLA2Q9H3K6 86 aa16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 MORC2Q9Y6X9 1032 aaPredicted RBP16.14■□□□□ 0.17
CLTCL1-201ENST00000412649 ZSCAN26Q16670 478 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 RASSF8Q8NHQ8 419 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 OSBPL3Q9H4L5 887 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 AOX1Q06278 1338 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
CLTCL1-201ENST00000412649 UBASH3AP57075 661 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 VPS18Q9P253 973 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 OAS2P29728 719 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 CDC37L1Q7L3B6 337 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 CRACR2AQ9BSW2 395 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 CALRP27797 417 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 FBXO38Q6PIJ6 1188 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 CFAP74Q9C0B2 1584 aa16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-201ENST00000412649 PLCH2O75038 1416 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 ZBTB22O15209 634 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 NAA30Q147X3 362 aaPredicted RBP16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 MRFAP1L1Q96HT8 127 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 ELP1O95163 1332 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 NFXL1Q6ZNB6 911 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 MAP9Q49MG5 647 aa16.11■□□□□ 0.17
CLTCL1-201ENST00000412649 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 CTIFO43310 598 aaKnown RBP16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 SMARCC1Q92922 1105 aaPredicted RBP16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 SHTN1A0MZ66 631 aa16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 ISM2Q6H9L7 571 aa16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 CCDC8Q9H0W5 538 aaPredicted RBP16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 KCNF1Q9H3M0 494 aa16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
CLTCL1-201ENST00000412649 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 ATP10AO60312 1499 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 PCMTD1Q96MG8 357 aaPredicted RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 G2E3Q7L622 706 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 MNAT1P51948 309 aa16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 NUDT16Q96DE0 195 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-201ENST00000412649 CDC25BP30305 580 aa16.08■□□□□ 0.17
CLTCL1-201ENST00000412649 GIMAP7Q8NHV1 300 aa16.08■□□□□ 0.17
CLTCL1-201ENST00000412649 NR1I2O75469 434 aa16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 CDR1P51861 262 aa16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 PNMA6EA0A0J9YXQ4 647 aa16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 KMT5BQ4FZB7 885 aa16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
CLTCL1-201ENST00000412649 TXNDC2Q86VQ3 553 aa16.07■□□□□ 0.16
CLTCL1-201ENST00000412649 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
CLTCL1-201ENST00000412649 MCM3P25205 808 aa16.07■□□□□ 0.16
CLTCL1-201ENST00000412649 PPP2R3AQ06190 1150 aa16.07■□□□□ 0.16
CLTCL1-201ENST00000412649 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
CLTCL1-201ENST00000412649 ME3Q16798 604 aa16.06■□□□□ 0.16
CLTCL1-201ENST00000412649 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
CLTCL1-201ENST00000412649 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
CLTCL1-201ENST00000412649 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
CLTCL1-201ENST00000412649 CHL1O00533 1208 aa16.06■□□□□ 0.16
CLTCL1-201ENST00000412649 IL13P35225 146 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms