RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 KIF23Q02241 960 aaPredicted RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 CXCL9Q07325 125 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 TNIP1Q15025 636 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 PKN2Q16513 984 aaKnown RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 RGMBQ6NW40 437 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 CTU1Q7Z7A3 348 aaKnown RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 REM2Q8IYK8 340 aaPredicted RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 C2orf69Q8N8R5 385 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 SUPT20HQ8NEM7 779 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 IL17REQ8NFR9 667 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZIC5Q96T25 663 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 BCL2L13Q9BXK5 485 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 NYXQ9GZU5 481 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZNRF3Q9ULT6 936 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 TIMELESSQ9UNS1 1208 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 USP16Q9Y5T5 823 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 MRC1P22897 1456 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 SLX4Q8IY92 1834 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 TIAM2Q8IVF5 1701 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 KIF7Q2M1P5 1343 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 CDHR2Q9BYE9 1310 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 CEP290O15078 2479 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 TRIOBPQ9H2D6 2365 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 CASP8AP2Q9UKL3 1982 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 FER1L6Q2WGJ9 1857 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 ADAMTS7Q9UKP4 1686 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 NPC1L1Q9UHC9 1359 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 FAM155AB1AL88 458 aaPredicted RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 ERVV-1B6SEH8 477 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 TCERG1O14776 1098 aaKnown RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 PPEF1O14829 653 aaPredicted RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 KCNQ3O43525 872 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZNF157P51786 506 aaPredicted RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 HIRAP54198 1017 aaPredicted RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 HLFQ16534 295 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 AOC3Q16853 763 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 KRT26Q7Z3Y9 468 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 USP48Q86UV5 1035 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 NUTM1Q86Y26 1132 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 RBM17Q96I25 401 aaKnown RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 CRAMP1Q96RY5 1269 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 GBA2Q9HCG7 927 aaPredicted RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 RNF186Q9NXI6 227 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 CNOT7Q9UIV1 285 aaKnown RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 HDAC9Q9UKV0 1011 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 HPS5Q9UPZ3 1129 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 AFDNP55196 1824 aaKnown RBP3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 TJP1Q07157 1748 aa3.18□□□□□ -1.9
RNU4-53P-201ENST00000410828 ADAMTSL1Q8N6G6 1762 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 DICER1Q9UPY3 1922 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 VIRMAQ69YN4 1812 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 KIF20BQ96Q89 1820 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 ANKRD26Q9UPS8 1709 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 PRAMEF22A3QJZ6 481 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 NBPF26B4DH59 902 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 U2SURPO15042 1029 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 BBOX1O75936 387 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 RAD17O75943 681 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 SLC10A3P09131 477 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 EIF4G2P78344 907 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 KIAA2012Q0VF49 1180 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 AMER1Q5JTC6 1135 aaPredicted RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 HABP4Q5JVS0 413 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 NBPF10Q6P3W6 841 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 DPP8Q6V1X1 898 aaPredicted RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 SULF1Q8IWU6 871 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 MICALL2Q8IY33 904 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 MPNDQ8N594 471 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 NGEFQ8N5V2 710 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 TRPM4Q8TD43 1214 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 RTF1Q92541 710 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 DPF2Q92785 391 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 DCPSQ96C86 337 aaKnown RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 NLRP3Q96P20 1036 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 CSRNP1Q96S65 589 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 RTFDC1Q9BY42 306 aaPredicted RBP3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 ATP6V0A2Q9Y487 856 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 CCDC88AQ3V6T2 1871 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 DLEC1Q9Y238 1755 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 SNED1Q8TER0 1413 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 MAP3K15Q6ZN16 1313 aa3.17□□□□□ -1.9
RNU4-53P-201ENST00000410828 ANKRD31Q8N7Z5 1873 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 CEMIPQ8WUJ3 1361 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 ABCC12Q96J65 1359 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 HSPA5P11021 654 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 GPTP24298 496 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 RPS12P25398 132 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 PRKAR2BP31323 418 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 FKBP1BP68106 108 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 TBC1D10BQ4KMP7 808 aaPredicted RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 PARP10Q53GL7 1025 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 NOM1Q5C9Z4 860 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 RBM26Q5T8P6 1007 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 SUSD4Q5VX71 490 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 INTS3Q68E01 1043 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 FBXO46Q6PJ61 603 aaPredicted RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 DLK2Q6UY11 383 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 KIF6Q6ZMV9 814 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 SAMD7Q7Z3H4 446 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms