RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 KDM3BQ7LBC6 1761 aa18.92■□□□□ 0.62
MCF2L-210ENST00000409954 IARSP41252 1262 aaKnown RBP18.92■□□□□ 0.62
MCF2L-210ENST00000409954 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
MCF2L-210ENST00000409954 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
MCF2L-210ENST00000409954 L3MBTL3Q96JM7 780 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-210ENST00000409954 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 TCIRG1Q13488 830 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 PROSER3Q2NL68 480 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 CHADLQ6NUI6 762 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 OLFM4Q6UX06 510 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 JMYQ8N9B5 988 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 NECTIN2Q92692 538 aa18.91■□□□□ 0.62
MCF2L-210ENST00000409954 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
MCF2L-210ENST00000409954 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 FZD9O00144 591 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 ANXA1P04083 346 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 HTRA3P83110 453 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
MCF2L-210ENST00000409954 VPS33BQ9H267 617 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 DBF4Q9UBU7 674 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-210ENST00000409954 ABCC12Q96J65 1359 aa18.9■□□□□ 0.62
MCF2L-210ENST00000409954 COL11A2P13942 1736 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-210ENST00000409954 BBOX1O75936 387 aa18.89■□□□□ 0.61
MCF2L-210ENST00000409954 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
MCF2L-210ENST00000409954 NLRP10Q86W26 655 aa18.89■□□□□ 0.61
MCF2L-210ENST00000409954 HDGFL1Q5TGJ6 251 aa18.88■□□□□ 0.61
MCF2L-210ENST00000409954 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
MCF2L-210ENST00000409954 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
MCF2L-210ENST00000409954 TAF1DQ9H5J8 278 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-210ENST00000409954 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
MCF2L-210ENST00000409954 TRMT112Q9UI30 125 aaKnown RBP18.88■□□□□ 0.61
MCF2L-210ENST00000409954 LAMB4A4D0S4 1761 aa18.88■□□□□ 0.61
MCF2L-210ENST00000409954 EIF6P56537 245 aaKnown RBP18.87■□□□□ 0.61
MCF2L-210ENST00000409954 KRT24Q2M2I5 525 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 PNMA8AQ86V59 439 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-210ENST00000409954 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 GPC2Q8N158 579 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 PLBD2Q8NHP8 589 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 WDR90Q96KV7 1748 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 HACL1Q9UJ83 578 aa18.87■□□□□ 0.61
MCF2L-210ENST00000409954 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 APAF1O14727 1248 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-210ENST00000409954 GNAI1P63096 354 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 ATP6V0A2Q9Y487 856 aa18.86■□□□□ 0.61
MCF2L-210ENST00000409954 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
MCF2L-210ENST00000409954 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
MCF2L-210ENST00000409954 LARGE2Q8N3Y3 721 aa18.85■□□□□ 0.61
MCF2L-210ENST00000409954 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
MCF2L-210ENST00000409954 IFT57Q9NWB7 429 aa18.85■□□□□ 0.61
MCF2L-210ENST00000409954 NUP98P52948 1817 aa18.84■□□□□ 0.61
MCF2L-210ENST00000409954 SH3TC1Q8TE82 1336 aa18.84■□□□□ 0.61
MCF2L-210ENST00000409954 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
MCF2L-210ENST00000409954 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
MCF2L-210ENST00000409954 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
MCF2L-210ENST00000409954 MBIPQ9NS73 344 aa18.84■□□□□ 0.61
MCF2L-210ENST00000409954 DICER1Q9UPY3 1922 aaKnown RBP18.84■□□□□ 0.61
MCF2L-210ENST00000409954 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.61
MCF2L-210ENST00000409954 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-210ENST00000409954 EPHX2P34913 555 aa18.83■□□□□ 0.6
MCF2L-210ENST00000409954 ZEB1P37275 1124 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-210ENST00000409954 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.6
MCF2L-210ENST00000409954 CREBZFQ9NS37 354 aa18.83■□□□□ 0.6
MCF2L-210ENST00000409954 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.6
MCF2L-210ENST00000409954 POTEIP0CG38 1075 aa18.82■□□□□ 0.6
MCF2L-210ENST00000409954 POTEJP0CG39 1038 aa18.82■□□□□ 0.6
MCF2L-210ENST00000409954 TMC4Q7Z404 712 aa18.82■□□□□ 0.6
MCF2L-210ENST00000409954 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
MCF2L-210ENST00000409954 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
MCF2L-210ENST00000409954 TIAM2Q8IVF5 1701 aa18.81■□□□□ 0.6
MCF2L-210ENST00000409954 EAPPQ56P03 285 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-210ENST00000409954 RTFDC1Q9BY42 306 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-210ENST00000409954 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
MCF2L-210ENST00000409954 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
MCF2L-210ENST00000409954 MPNDQ8N594 471 aa18.8■□□□□ 0.6
MCF2L-210ENST00000409954 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
MCF2L-210ENST00000409954 ABCC4O15439 1325 aa18.79■□□□□ 0.6
MCF2L-210ENST00000409954 PPIP5K2O43314 1243 aa18.79■□□□□ 0.6
MCF2L-210ENST00000409954 ITGBL1O95965 494 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-210ENST00000409954 HSP90B1P14625 803 aaKnown RBP18.79■□□□□ 0.6
MCF2L-210ENST00000409954 LMOD1P29536 600 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-210ENST00000409954 GRAPQ13588 217 aa18.79■□□□□ 0.6
MCF2L-210ENST00000409954 DPP8Q6V1X1 898 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-210ENST00000409954 RIC3Q7Z5B4 369 aa18.79■□□□□ 0.6
MCF2L-210ENST00000409954 GRAPLQ8TC17 118 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-210ENST00000409954 SF3B3Q15393 1217 aaKnown RBP18.78■□□□□ 0.6
MCF2L-210ENST00000409954 ZNRF3Q9ULT6 936 aa18.78■□□□□ 0.6
MCF2L-210ENST00000409954 PASKQ96RG2 1323 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-210ENST00000409954 GOLGA2Q08379 1002 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 CNTROBQ8N137 903 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 FAM89AQ96GI7 184 aa18.77■□□□□ 0.6
MCF2L-210ENST00000409954 TMEM88BA6NKF7 163 aa18.76■□□□□ 0.59
MCF2L-210ENST00000409954 AOC3Q16853 763 aa18.76■□□□□ 0.59
MCF2L-210ENST00000409954 CCDC27Q2M243 656 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms